RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 SKAP2O75563 359 aaPredicted RBP9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 LYPLA1O75608 230 aaPredicted RBP9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 SLC25A12O75746 678 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 NEURL1O76050 574 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 SNUPNO95149 360 aaKnown RBP9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 CRYABP02511 175 aaKnown RBP9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 IGKV3-11P04433 115 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 CT62P0C5K7 136 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 GRK2P25098 689 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 SSTR4P31391 388 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 ARRB2P32121 409 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 SLC1A6P48664 564 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 RPL38P63173 70 aaKnown RBP9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 MPP2Q14168 576 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 ELOAQ14241 798 aaKnown RBP9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 AGBL2Q5U5Z8 902 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 HLA-DQA1Q5Y7H0 255 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 FAM71E1Q6IPT2 247 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 FAM180BQ6P0A1 224 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 OPN5Q6U736 354 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 IL20RBQ6UXL0 311 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 Q6ZSR9 355 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 HDXQ7Z353 690 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 GALNTL5Q7Z4T8 443 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 C9orf40Q8IXQ3 194 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 CCDC116Q8IYX3 515 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 LRRC25Q8N386 305 aaPredicted RBP9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 GOLGA6L1Q8N7Z2 621 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 OR7G1Q8NGA0 311 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 OR6Y1Q8NGX8 325 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 OR2T11Q8NH01 316 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 DNAJB8Q8NHS0 232 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 NUBPLQ8TB37 319 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 SLC22A8Q8TCC7 542 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 TLCD1Q96CP7 247 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 CNRIP1Q96F85 164 aaPredicted RBP9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 SCMH1Q96GD3 660 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 PPP3R2Q96LZ3 170 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 BBS4Q96RK4 519 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 GAL3ST4Q96RP7 486 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 RASL10BQ96S79 203 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 CCT7Q99832 543 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 HES7Q9BYE0 225 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 OR10A5Q9H207 317 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 CLMPQ9H6B4 373 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 TRIM45Q9H8W5 580 aaPredicted RBP9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 MYNNQ9NPC7 610 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 TIMMDC1Q9NPL8 285 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 SLC35C2Q9NQQ7 365 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 EHD3Q9NZN3 535 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 BCAP29Q9UHQ4 241 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 TMED5Q9Y3A6 229 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 CCL27Q9Y4X3 112 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 SHANK1Q9Y566 2161 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 CFAP46Q8IYW2 2715 aa9.82□□□□□ -0.84
TRAPPC12-213ENST00000461577 TMEM200CA6NKL6 621 aa9.81□□□□□ -0.84
TRAPPC12-213ENST00000461577 LSM1O15116 133 aaKnown RBP9.81□□□□□ -0.84
TRAPPC12-213ENST00000461577 ATP1B1P05026 303 aa9.81□□□□□ -0.84
TRAPPC12-213ENST00000461577 DDCP20711 480 aa9.81□□□□□ -0.84
TRAPPC12-213ENST00000461577 GNLYP22749 145 aa9.81□□□□□ -0.84
TRAPPC12-213ENST00000461577 MAPK1P28482 360 aa9.81□□□□□ -0.84
TRAPPC12-213ENST00000461577 SOX3P41225 446 aa9.81□□□□□ -0.84
TRAPPC12-213ENST00000461577 SLC37A1P57057 533 aa9.81□□□□□ -0.84
TRAPPC12-213ENST00000461577 PMP22Q01453 160 aa9.81□□□□□ -0.84
TRAPPC12-213ENST00000461577 FUT7Q11130 342 aa9.81□□□□□ -0.84
TRAPPC12-213ENST00000461577 MAP4K2Q12851 820 aa9.81□□□□□ -0.84
TRAPPC12-213ENST00000461577 KIAA0040Q15053 153 aa9.81□□□□□ -0.84
TRAPPC12-213ENST00000461577 MPEG1Q2M385 716 aa9.81□□□□□ -0.84
TRAPPC12-213ENST00000461577 PRICKLE4Q2TBC4 344 aa9.81□□□□□ -0.84
TRAPPC12-213ENST00000461577 UGT3A2Q3SY77 523 aa9.81□□□□□ -0.84
TRAPPC12-213ENST00000461577 ATP6AP1LQ52LC2 224 aa9.81□□□□□ -0.84
TRAPPC12-213ENST00000461577 PIGGQ5H8A4 983 aa9.81□□□□□ -0.84
TRAPPC12-213ENST00000461577 IKBIPQ70UQ0 350 aa9.81□□□□□ -0.84
TRAPPC12-213ENST00000461577 TICAM1Q8IUC6 712 aa9.81□□□□□ -0.84
TRAPPC12-213ENST00000461577 TRIM42Q8IWZ5 723 aa9.81□□□□□ -0.84
TRAPPC12-213ENST00000461577 KIRREL3Q8IZU9 778 aa9.81□□□□□ -0.84
TRAPPC12-213ENST00000461577 VWA5B2Q8N398 1253 aa9.81□□□□□ -0.84
TRAPPC12-213ENST00000461577 ADCY4Q8NFM4 1077 aa9.81□□□□□ -0.84
TRAPPC12-213ENST00000461577 FAR1Q8WVX9 515 aa9.81□□□□□ -0.84
TRAPPC12-213ENST00000461577 ZNF681Q96N22 645 aa9.81□□□□□ -0.84
TRAPPC12-213ENST00000461577 WWTR1Q9GZV5 400 aa9.81□□□□□ -0.84
TRAPPC12-213ENST00000461577 OLAHQ9NV23 265 aa9.81□□□□□ -0.84
TRAPPC12-213ENST00000461577 CFL2Q9Y281 166 aa9.81□□□□□ -0.84
TRAPPC12-213ENST00000461577 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC12-213ENST00000461577 KLF13Q9Y2Y9 288 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC12-213ENST00000461577 RAP2CQ9Y3L5 183 aa9.81□□□□□ -0.84
TRAPPC12-213ENST00000461577 SPENQ96T58 3664 aaKnown RBP9.81□□□□□ -0.84
TRAPPC12-213ENST00000461577 C2orf92A0A1B0GVN3 265 aa9.8□□□□□ -0.84
TRAPPC12-213ENST00000461577 TCP11X1B4DZS4 312 aa9.8□□□□□ -0.84
TRAPPC12-213ENST00000461577 KLRC4-KLRK1H3BQV0 150 aa9.8□□□□□ -0.84
TRAPPC12-213ENST00000461577 NME2P1O60361 137 aa9.8□□□□□ -0.84
TRAPPC12-213ENST00000461577 PEX11AO75192 247 aa9.8□□□□□ -0.84
TRAPPC12-213ENST00000461577 BCAS2O75934 225 aaPredicted RBP9.8□□□□□ -0.84
TRAPPC12-213ENST00000461577 OR6B1O95007 311 aa9.8□□□□□ -0.84
TRAPPC12-213ENST00000461577 CLPSP04118 112 aa9.8□□□□□ -0.84
TRAPPC12-213ENST00000461577 EDN3P14138 238 aa9.8□□□□□ -0.84
TRAPPC12-213ENST00000461577 H2AFXP16104 143 aaPredicted RBP9.8□□□□□ -0.84
TRAPPC12-213ENST00000461577 NME2P22392 152 aa9.8□□□□□ -0.84
TRAPPC12-213ENST00000461577 NTSP30990 170 aa9.8□□□□□ -0.84
TRAPPC12-213ENST00000461577 MPIP34949 423 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms