RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 C2orf92A0A1B0GVN3 265 aa21.25■□□□□ 0.99
PTPN4-208ENST00000460289 GNG14A0A1W2PPG7 69 aa21.25■□□□□ 0.99
PTPN4-208ENST00000460289 A0A1W2PS29 197 aa21.25■□□□□ 0.99
PTPN4-208ENST00000460289 CCL21O00585 134 aa21.25■□□□□ 0.99
PTPN4-208ENST00000460289 PCDH7O60245 1069 aa21.25■□□□□ 0.99
PTPN4-208ENST00000460289 P04436 131 aa21.25■□□□□ 0.99
PTPN4-208ENST00000460289 DRD2P14416 443 aa21.25■□□□□ 0.99
PTPN4-208ENST00000460289 NT5EP21589 574 aa21.25■□□□□ 0.99
PTPN4-208ENST00000460289 ALDH9A1P49189 494 aa21.25■□□□□ 0.99
PTPN4-208ENST00000460289 HMGCS1Q01581 520 aa21.25■□□□□ 0.99
PTPN4-208ENST00000460289 EBPQ15125 230 aaKnown RBP21.25■□□□□ 0.99
PTPN4-208ENST00000460289 HLA-DQA1Q5Y7H0 255 aa21.25■□□□□ 0.99
PTPN4-208ENST00000460289 RGS9BPQ6ZS82 235 aa21.25■□□□□ 0.99
PTPN4-208ENST00000460289 TRABD2AQ86V40 505 aa21.25■□□□□ 0.99
PTPN4-208ENST00000460289 TAGAPQ8N103 731 aa21.25■□□□□ 0.99
PTPN4-208ENST00000460289 OR2M7Q8NG81 312 aa21.25■□□□□ 0.99
PTPN4-208ENST00000460289 OR7G1Q8NGA0 311 aa21.25■□□□□ 0.99
PTPN4-208ENST00000460289 TP53INP1Q96A56 240 aa21.25■□□□□ 0.99
PTPN4-208ENST00000460289 KLHL29Q96CT2 875 aa21.25■□□□□ 0.99
PTPN4-208ENST00000460289 FAM173AQ9BQD7 235 aa21.25■□□□□ 0.99
PTPN4-208ENST00000460289 LGALS13Q9UHV8 139 aa21.25■□□□□ 0.99
PTPN4-208ENST00000460289 PLLPQ9Y342 182 aa21.25■□□□□ 0.99
PTPN4-208ENST00000460289 ZNF780BQ9Y6R6 833 aa21.25■□□□□ 0.99
PTPN4-208ENST00000460289 HS6ST1O60243 411 aa21.24■□□□□ 0.99
PTPN4-208ENST00000460289 CLPSP04118 112 aa21.24■□□□□ 0.99
PTPN4-208ENST00000460289 ATP1B1P05026 303 aa21.24■□□□□ 0.99
PTPN4-208ENST00000460289 SERPINB3P29508 390 aa21.24■□□□□ 0.99
PTPN4-208ENST00000460289 SSTR4P31391 388 aa21.24■□□□□ 0.99
PTPN4-208ENST00000460289 RFC3P40938 356 aa21.24■□□□□ 0.99
PTPN4-208ENST00000460289 GSTM5P46439 218 aa21.24■□□□□ 0.99
PTPN4-208ENST00000460289 FOXA1P55317 472 aa21.24■□□□□ 0.99
PTPN4-208ENST00000460289 HEPACAMQ14CZ8 416 aa21.24■□□□□ 0.99
PTPN4-208ENST00000460289 ZNF791Q3KP31 576 aaPredicted RBP21.24■□□□□ 0.99
PTPN4-208ENST00000460289 SPDYAQ5MJ70 313 aa21.24■□□□□ 0.99
PTPN4-208ENST00000460289 SLC22A10Q63ZE4 541 aa21.24■□□□□ 0.99
PTPN4-208ENST00000460289 GALNT18Q6P9A2 607 aa21.24■□□□□ 0.99
PTPN4-208ENST00000460289 Q6ZPB1 254 aaPredicted RBP21.24■□□□□ 0.99
PTPN4-208ENST00000460289 GK5Q6ZS86 529 aa21.24■□□□□ 0.99
PTPN4-208ENST00000460289 BANPQ8N9N5 519 aa21.24■□□□□ 0.99
PTPN4-208ENST00000460289 SPACA9Q96E40 222 aaPredicted RBP21.24■□□□□ 0.99
PTPN4-208ENST00000460289 APIPQ96GX9 242 aa21.24■□□□□ 0.99
PTPN4-208ENST00000460289 APOPT1Q96IL0 206 aa21.24■□□□□ 0.99
PTPN4-208ENST00000460289 OR10A5Q9H207 317 aa21.24■□□□□ 0.99
PTPN4-208ENST00000460289 SIRT5Q9NXA8 310 aa21.24■□□□□ 0.99
PTPN4-208ENST00000460289 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.24■□□□□ 0.99
PTPN4-208ENST00000460289 DLGAP4Q9Y2H0 992 aa21.24■□□□□ 0.99
PTPN4-208ENST00000460289 V9GYY5 206 aaPredicted RBP21.24■□□□□ 0.99
PTPN4-208ENST00000460289 ESPNB1AK53 854 aa21.23■□□□□ 0.99
PTPN4-208ENST00000460289 ACOT7O00154 380 aa21.23■□□□□ 0.99
PTPN4-208ENST00000460289 ZG16O60844 167 aa21.23■□□□□ 0.99
PTPN4-208ENST00000460289 TRIM13O60858 407 aa21.23■□□□□ 0.99
PTPN4-208ENST00000460289 NADKO95544 446 aaPredicted RBP21.23■□□□□ 0.99
PTPN4-208ENST00000460289 CT62P0C5K7 136 aa21.23■□□□□ 0.99
PTPN4-208ENST00000460289 ABOP16442 354 aa21.23■□□□□ 0.99
PTPN4-208ENST00000460289 FEN1P39748 380 aaKnown RBP21.23■□□□□ 0.99
PTPN4-208ENST00000460289 RAE1P78406 368 aaKnown RBP21.23■□□□□ 0.99
PTPN4-208ENST00000460289 PLGLB1Q02325 96 aa21.23■□□□□ 0.99
PTPN4-208ENST00000460289 BTKQ06187 659 aa21.23■□□□□ 0.99
PTPN4-208ENST00000460289 MAP4K2Q12851 820 aa21.23■□□□□ 0.99
PTPN4-208ENST00000460289 IMPG1Q17R60 797 aa21.23■□□□□ 0.99
PTPN4-208ENST00000460289 PAOXQ6QHF9 649 aa21.23■□□□□ 0.99
PTPN4-208ENST00000460289 SCIMPQ6UWF3 145 aa21.23■□□□□ 0.99
PTPN4-208ENST00000460289 FAM47EQ6ZV65 393 aa21.23■□□□□ 0.99
PTPN4-208ENST00000460289 C10orf107Q8IVU9 208 aa21.23■□□□□ 0.99
PTPN4-208ENST00000460289 HOMEZQ8IX15 550 aa21.23■□□□□ 0.99
PTPN4-208ENST00000460289 SAMD14Q8IZD0 417 aaPredicted RBP21.23■□□□□ 0.99
PTPN4-208ENST00000460289 SH3BGRL2Q9UJC5 107 aa21.23■□□□□ 0.99
PTPN4-208ENST00000460289 UTS2RQ9UKP6 389 aa21.23■□□□□ 0.99
PTPN4-208ENST00000460289 CFL2Q9Y281 166 aa21.23■□□□□ 0.99
PTPN4-208ENST00000460289 CAPN14A8MX76 684 aa21.22■□□□□ 0.99
PTPN4-208ENST00000460289 CLDN1O95832 211 aa21.22■□□□□ 0.99
PTPN4-208ENST00000460289 IL3P08700 152 aa21.22■□□□□ 0.99
PTPN4-208ENST00000460289 FBXO45P0C2W1 286 aa21.22■□□□□ 0.99
PTPN4-208ENST00000460289 UROSP10746 265 aa21.22■□□□□ 0.99
PTPN4-208ENST00000460289 ESRRAP11474 423 aaPredicted RBP21.22■□□□□ 0.99
PTPN4-208ENST00000460289 TIA1P31483 386 aaKnown RBP eCLIP21.22■□□□□ 0.99
PTPN4-208ENST00000460289 PPIAP62937 165 aaKnown RBP21.22■□□□□ 0.99
PTPN4-208ENST00000460289 C3AR1Q16581 482 aa21.22■□□□□ 0.99
PTPN4-208ENST00000460289 ERCC6LQ2NKX8 1250 aa21.22■□□□□ 0.99
PTPN4-208ENST00000460289 PRICKLE4Q2TBC4 344 aa21.22■□□□□ 0.99
PTPN4-208ENST00000460289 LYPD8Q6UX82 237 aa21.22■□□□□ 0.99
PTPN4-208ENST00000460289 TRIM46Q7Z4K8 759 aa21.22■□□□□ 0.99
PTPN4-208ENST00000460289 SLC22A16Q86VW1 577 aa21.22■□□□□ 0.99
PTPN4-208ENST00000460289 SRRM1Q8IYB3 904 aaKnown RBP21.22■□□□□ 0.99
PTPN4-208ENST00000460289 MMP21Q8N119 569 aa21.22■□□□□ 0.99
PTPN4-208ENST00000460289 VWA5B2Q8N398 1253 aa21.22■□□□□ 0.99
PTPN4-208ENST00000460289 ZNF615Q8N8J6 731 aa21.22■□□□□ 0.99
PTPN4-208ENST00000460289 C11orf24Q96F05 449 aaPredicted RBP21.22■□□□□ 0.99
PTPN4-208ENST00000460289 TRMOQ9BU70 441 aa21.22■□□□□ 0.99
PTPN4-208ENST00000460289 PARD6BQ9BYG5 372 aa21.22■□□□□ 0.99
PTPN4-208ENST00000460289 BRINP2Q9C0B6 783 aa21.22■□□□□ 0.99
PTPN4-208ENST00000460289 RRAGDQ9NQL2 400 aaPredicted RBP21.22■□□□□ 0.99
PTPN4-208ENST00000460289 HEY2Q9UBP5 337 aa21.22■□□□□ 0.99
PTPN4-208ENST00000460289 DIDO1Q9BTC0 2240 aaKnown RBP21.22■□□□□ 0.99
PTPN4-208ENST00000460289 PRRG2O14669 202 aa21.21■□□□□ 0.99
PTPN4-208ENST00000460289 ANXA4P09525 319 aaPredicted RBP21.21■□□□□ 0.99
PTPN4-208ENST00000460289 CCL3P10147 92 aa21.21■□□□□ 0.99
PTPN4-208ENST00000460289 S1PR1P21453 382 aa21.21■□□□□ 0.99
PTPN4-208ENST00000460289 PTGER1P34995 402 aa21.21■□□□□ 0.99
PTPN4-208ENST00000460289 NR0B1P51843 470 aaKnown RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms