RNA–Protein interactions for RNA: ENST00000460072.5

THUMPD2-203, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 3,148 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-203ENST00000460072 ADAP2Q9NPF8 381 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 RASSF1Q9NS23 344 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 GPRC5BQ9NZH0 403 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 MARCOQ9UEW3 520 aaPredicted RBP6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 ZNF223Q9UK11 482 aaPredicted RBP6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 PPT2Q9UMR5 302 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 NPIPA1Q9UND3 350 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 TSC22D4Q9Y3Q8 395 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 SEC16AO15027 2179 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 NIPSNAP2O75323 286 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 GLI4P10075 376 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 RNH1P13489 461 aaKnown RBP6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 ZNF23P17027 643 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 ALOX12P18054 663 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 DNASE1P24855 282 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 CNTFP26441 200 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 TIMP3P35625 211 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 GRK3P35626 688 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 ALDH3B2P48448 385 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 RAB38P57729 211 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 BASP1P80723 227 aaKnown RBP6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 RGS1Q08116 209 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 GTF3C1Q12789 2109 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 PDCD4Q53EL6 469 aaKnown RBP6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 TEDDM1Q5T9Z0 273 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 CASC4Q6P4E1 433 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 NCCRP1Q6ZVX7 275 aaPredicted RBP6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 PATL1Q86TB9 770 aaKnown RBP6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 SLC22A16Q86VW1 577 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 C17orf64Q86WR6 236 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 ZNF595Q8IYB9 648 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 PPM1NQ8N819 430 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 TRPV3Q8NET8 790 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 NUBPLQ8TB37 319 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 UTP15Q8TED0 518 aaKnown RBP6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 KIAA1191Q96A73 305 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 SDCCAG3Q96C92 435 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 LRRC39Q96DD0 335 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 ARSGQ96EG1 525 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 SCYL1Q96KG9 808 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 SGCZQ96LD1 299 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 LRGUKQ96M69 825 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 SERPINI1Q99574 410 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 ZNF395Q9H8N7 513 aaPredicted RBP6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 PARVBQ9HBI1 364 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 CHRAC1Q9NRG0 131 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 ZNF358Q9NW07 568 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 RIMS3Q9UJD0 308 aa6.54□□□□□ -1.36
THUMPD2-203ENST00000460072 TFECO14948 347 aaPredicted RBP6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 ITM2AO43736 263 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 MAN1A2O60476 641 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 PRMT3O60678 531 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 SERPINB1P30740 379 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 IDH3AP50213 366 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 TIAL1Q01085 375 aaKnown RBP eCLIP6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 SYT16Q17RD7 645 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 MPEG1Q2M385 716 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 FAM182AQ5T1J6 154 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 SHEQ5VZ18 495 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 ZNF549Q6P9A3 640 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 CA13Q8N1Q1 262 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 POU5F2Q8N7G0 328 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 OR2M7Q8NG81 312 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 OR14A16Q8NHC5 309 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 GABPB2Q8TAK5 448 aaPredicted RBP6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 ACMSDQ8TDX5 336 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 RNASE6Q93091 150 aaKnown RBP6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 SLC35B4Q969S0 331 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 LRRC46Q96FV0 321 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 ZFP3Q96NJ6 502 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 SECISBP2Q96T21 854 aaKnown RBP6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 PRPF18Q99633 342 aaKnown RBP6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 HES7Q9BYE0 225 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 LYRM4Q9HD34 91 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 RAB6BQ9NRW1 208 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 FAF1Q9UNN5 650 aaPredicted RBP6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 NAALAD2Q9Y3Q0 740 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 FAM215AQ9Y5M1 114 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 HRH3Q9Y5N1 445 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 ZCWPW2A0A1B0GU75 182 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 TMEM200CA6NKL6 621 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 RAF1P04049 648 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 HEXAP06865 529 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 ATP6V1B1P15313 513 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 GRK2P25098 689 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 ACVR2AP27037 513 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 OPRM1P35372 400 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 ZFP36L2P47974 494 aaKnown RBP6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 SSR4P51571 173 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 TUBA4AP68366 448 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 MAT1AQ00266 395 aaKnown RBP6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 ELAVL1Q15717 326 aaKnown RBP6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 RTL6Q6ICC9 239 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 SPINK14Q6IE38 97 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 CAPN13Q6MZZ7 669 aaPredicted RBP6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 ARSKQ6UWY0 536 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 GK5Q6ZS86 529 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 KRTAP1-3Q8IUG1 177 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 CTAGE3PQ8IX95 158 aa6.53□□□□□ -1.36
THUMPD2-203ENST00000460072 TMEM132CQ8N3T6 1108 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms