RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 CHST10O43529 356 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 OR1F1O43749 312 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 ATP6V1G1O75348 118 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 DLGAP3O95886 979 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 C1QCP02747 245 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 PCCBP05166 539 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 IFI6P09912 130 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 TRAPPC2P0DI81 140 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 TRAPPC2BP0DI82 140 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 GAAP10253 952 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 ACRP10323 421 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 EPCAMP16422 314 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 ZNF10P21506 573 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-202ENST00000459727 GALP22466 123 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 CFL1P23528 166 aaKnown RBP8.37□□□□□ -1.07
HDAC3-202ENST00000459727 POU1F1P28069 291 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 CMPK1P30085 196 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 MPIP34949 423 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 CAPZA2P47755 286 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 TAS2R38P59533 333 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 CSNK1G2P78368 415 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 MEF2AQ02078 507 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-202ENST00000459727 ZNF91Q05481 1191 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 RAB40BQ12829 278 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 TARDBPQ13148 414 aaKnown RBP eCLIP8.37□□□□□ -1.07
HDAC3-202ENST00000459727 KRT33BQ14525 404 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 PUM1Q14671 1186 aaKnown RBP eCLIP8.37□□□□□ -1.07
HDAC3-202ENST00000459727 TRAM2Q15035 370 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 SEC23BQ15437 767 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 ENTPD8Q5MY95 495 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 PIP5KL1Q5T9C9 394 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 NDUFAF5Q5TEU4 345 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 C1orf94Q6P1W5 598 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 SLC36A4Q6YBV0 504 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 DEF8Q6ZN54 512 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 NCCRP1Q6ZVX7 275 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-202ENST00000459727 BTLAQ7Z6A9 289 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 ATCAYQ86WG3 371 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 ADGRF3Q8IZF5 1079 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 CADM3Q8N126 398 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 PARP16Q8N5Y8 322 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 NANOGP1Q8N7R0 232 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 ZNF740Q8NDX6 193 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 GPR32P1Q8NGA4 272 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 GNPDA2Q8TDQ7 276 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 TP53INP1Q96A56 240 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 EXOSC8Q96B26 276 aaKnown RBP8.37□□□□□ -1.07
HDAC3-202ENST00000459727 TRIM43Q96BQ3 446 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-202ENST00000459727 ZNF707Q96C28 371 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-202ENST00000459727 ZSWIM3Q96MP5 696 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 ASB16Q96NS5 453 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 AMDHD1Q96NU7 426 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 IL17FQ96PD4 163 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 F2RL3Q96RI0 385 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 MENTQ9BUN1 341 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 KLHL25Q9H0H3 589 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 SPNS1Q9H2V7 528 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 MTG2Q9H4K7 406 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 SMURF1Q9HCE7 757 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 PRDM8Q9NQV8 689 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 DZANK1Q9NVP4 752 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 THAP10Q9P2Z0 257 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-202ENST00000459727 TRPC4Q9UBN4 977 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 AASSQ9UDR5 926 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 PNMA8BQ9ULN7 279 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-202ENST00000459727 SNX7Q9UNH6 387 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 GSTK1Q9Y2Q3 226 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 PCDHGB6Q9Y5F9 930 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 COLEC10Q9Y6Z7 277 aa8.37□□□□□ -1.07
HDAC3-202ENST00000459727 MTCL1Q9Y4B5 1905 aaKnown RBP8.37□□□□□ -1.07
HDAC3-202ENST00000459727 KIF26AQ9ULI4 1882 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-202ENST00000459727 CEP290O15078 2479 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 TMEM129A0AVI4 362 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 LRIT2A6NDA9 550 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 TBC1D3BA6NDS4 549 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 HEPACAM2A8MVW5 462 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 ARHGAP33O14559 1287 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 FFAR1O14842 300 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 DSCR3O14972 297 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 PRODHO43272 600 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 EMC8O43402 210 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 ADAM23O75077 832 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 ENTPD6O75354 484 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 SOX30O94993 753 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 MYCP01106 439 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-202ENST00000459727 POU2F1P14859 743 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 ALOX12P18054 663 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 CSNK2A2P19784 350 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-202ENST00000459727 HIST1H1TP22492 207 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-202ENST00000459727 PTBP1P26599 531 aaKnown RBP eCLIP8.36□□□□□ -1.07
HDAC3-202ENST00000459727 PRKAR1BP31321 381 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 TRIM23P36406 574 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 CLCNKAP51800 687 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 NCBP2P52298 156 aaKnown RBP eCLIP8.36□□□□□ -1.07
HDAC3-202ENST00000459727 LIM2P55344 173 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 RPS21P63220 83 aaKnown RBP8.36□□□□□ -1.07
HDAC3-202ENST00000459727 CYP4F2P78329 520 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 NTHL1P78549 312 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 IFITM3Q01628 133 aa8.36□□□□□ -1.07
HDAC3-202ENST00000459727 ST3GAL3Q11203 375 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms