RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 TMEM237Q96Q45 408 aa10.42□□□□□ -0.74
PRAMEF35P-201ENST00000458709 NT5DC2Q9H857 520 aa10.42□□□□□ -0.74
PRAMEF35P-201ENST00000458709 BEX4Q9NWD9 120 aaPredicted RBP10.42□□□□□ -0.74
PRAMEF35P-201ENST00000458709 HPF1Q9NWY4 346 aa10.42□□□□□ -0.74
PRAMEF35P-201ENST00000458709 CD274Q9NZQ7 290 aa10.42□□□□□ -0.74
PRAMEF35P-201ENST00000458709 CPSF2Q9P2I0 782 aaKnown RBP10.42□□□□□ -0.74
PRAMEF35P-201ENST00000458709 SLC17A7Q9P2U7 560 aa10.42□□□□□ -0.74
PRAMEF35P-201ENST00000458709 SPRR3Q9UBC9 169 aa10.42□□□□□ -0.74
PRAMEF35P-201ENST00000458709 KCNE2Q9Y6J6 123 aa10.42□□□□□ -0.74
PRAMEF35P-201ENST00000458709 ATP6AP2A0A1C7CYW4 349 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 A0A1W2PPR1 153 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 SUPT3HB4E1H0 165 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 SMAD7O15105 426 aaKnown RBP10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 NPHS1O60500 1241 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 TRIM13O60858 407 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 SUPT3HO75486 399 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 ATP6AP2O75787 350 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 OR2J2O76002 312 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 GUCA1CO95843 209 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 S100BP04271 92 aaPredicted RBP10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 ZNF888P0CJ79 500 aaPredicted RBP10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 CDH1P12830 882 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 GFAPP14136 432 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 ALOX12P18054 663 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 GRK2P25098 689 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 PPP2R1BP30154 601 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 SOX3P41225 446 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 MAN2A2P49641 1150 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 MEF2AQ02078 507 aaPredicted RBP10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 LCP2Q13094 533 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 NAE1Q13564 534 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 POU4F3Q15319 338 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 PDK4Q16654 411 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 XKR6Q5GH73 641 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 WLSQ5T9L3 541 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 SLCO4C1Q6ZQN7 724 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 GK5Q6ZS86 529 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 FRMD7Q6ZUT3 714 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 THOC6Q86W42 341 aaKnown RBP10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 KIRREL3Q8IZU9 778 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 MFSD9Q8NBP5 474 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 ARMC2Q8NEN0 867 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 LINC01560Q8TB33 94 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 ASB15Q8WXK1 588 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 NCLNQ969V3 563 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 SARAFQ96BY9 339 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 ZNF382Q96SR6 550 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 KCNK17Q96T54 332 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 GSTO2Q9H4Y5 243 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 PELI2Q9HAT8 420 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 ZBTB26Q9HCK0 441 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 PRDM9Q9NQV7 894 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 DNAJC11Q9NVH1 559 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 PSD3Q9NYI0 1048 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 SLC22A14Q9Y267 594 aa10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 YARS2Q9Y2Z4 477 aaKnown RBP10.41□□□□□ -0.74
PRAMEF35P-201ENST00000458709 SERTM1A2A2V5 107 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 TUBAL3A6NHL2 446 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 CLCA1A8K7I4 914 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 KDM4EB2RXH2 506 aaPredicted RBP10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 FAM47E-STBD1D6RA91 191 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 NPIPB8E9PQR5 432 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 SUSD5O60279 629 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 SPAG7O75391 227 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 FGF4P08620 206 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 EPXP11678 715 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 EPB42P16452 691 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 DNASE1L1P49184 302 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 WNT3P56703 355 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 PPP2R2BQ00005 443 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 FOXO1Q12778 655 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 TRAF3Q13114 568 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 ZNF750Q32MQ0 723 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 FBXL19-AS1Q494R0 122 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 UNC50Q53HI1 259 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 HSP90B2PQ58FF3 399 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 NDUFAF5Q5TEU4 345 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 LIPJQ5W064 366 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 C17orf64Q86WR6 236 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 GPALPP1Q8IXQ4 340 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 ARFGAP2Q8N6H7 521 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 SLC5A11Q8WWX8 675 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 NEIL2Q969S2 332 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 VMP1Q96GC9 406 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 RASL10BQ96S79 203 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 EGFL8Q99944 293 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 FAM173AQ9BQD7 235 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 EFCAB11Q9BUY7 163 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 RHBGQ9H310 441 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 CENPHQ9H3R5 247 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 CCDC134Q9H6E4 229 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 LDAHQ9H6V9 325 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 IL1RL2Q9HB29 575 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 WWOXQ9NZC7 414 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 OPTCQ9UBM4 332 aa10.4□□□□□ -0.74
PRAMEF35P-201ENST00000458709 HSPB2A8KAH6 182 aa10.39□□□□□ -0.75
PRAMEF35P-201ENST00000458709 TMEM114B3SHH9 223 aa10.39□□□□□ -0.75
PRAMEF35P-201ENST00000458709 H0YIV9 168 aa10.39□□□□□ -0.75
PRAMEF35P-201ENST00000458709 TGFBR3LH3BV60 316 aa10.39□□□□□ -0.75
PRAMEF35P-201ENST00000458709 WWP2O00308 870 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms