RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 TGIF2LYQ8IUE0 185 aa19.77■□□□□ 0.76
CPNE1-220ENST00000458038 LACC1Q8IV20 430 aa19.77■□□□□ 0.76
CPNE1-220ENST00000458038 PPM1NQ8N819 430 aa19.77■□□□□ 0.76
CPNE1-220ENST00000458038 JSRP1Q96MG2 331 aaPredicted RBP19.77■□□□□ 0.76
CPNE1-220ENST00000458038 SLC6A15Q9H2J7 730 aa19.77■□□□□ 0.76
CPNE1-220ENST00000458038 DPH5Q9H2P9 285 aa19.77■□□□□ 0.76
CPNE1-220ENST00000458038 CLEC4MQ9H2X3 399 aaPredicted RBP19.77■□□□□ 0.76
CPNE1-220ENST00000458038 A0A087X1B8 175 aa19.76■□□□□ 0.75
CPNE1-220ENST00000458038 A0A0A6YYD5 115 aa19.76■□□□□ 0.75
CPNE1-220ENST00000458038 C2orf92A0A1B0GVN3 265 aa19.76■□□□□ 0.75
CPNE1-220ENST00000458038 FOXE1O00358 373 aaPredicted RBP19.76■□□□□ 0.75
CPNE1-220ENST00000458038 CDH16O75309 829 aa19.76■□□□□ 0.75
CPNE1-220ENST00000458038 FAM58BPP0C7Q3 252 aa19.76■□□□□ 0.75
CPNE1-220ENST00000458038 MTHFD2P13995 350 aa19.76■□□□□ 0.75
CPNE1-220ENST00000458038 GDF1P27539 372 aa19.76■□□□□ 0.75
CPNE1-220ENST00000458038 UQCRC1P31930 480 aa19.76■□□□□ 0.75
CPNE1-220ENST00000458038 PIK3CGP48736 1102 aa19.76■□□□□ 0.75
CPNE1-220ENST00000458038 ALDH18A1P54886 795 aaKnown RBP19.76■□□□□ 0.75
CPNE1-220ENST00000458038 RPS13P62277 151 aaKnown RBP19.76■□□□□ 0.75
CPNE1-220ENST00000458038 RPS6KA2Q15349 733 aa19.76■□□□□ 0.75
CPNE1-220ENST00000458038 FLYWCH1Q4VC44 716 aa19.76■□□□□ 0.75
CPNE1-220ENST00000458038 HLA-DQA1Q5Y7H0 255 aa19.76■□□□□ 0.75
CPNE1-220ENST00000458038 CMC1Q7Z7K0 106 aa19.76■□□□□ 0.75
CPNE1-220ENST00000458038 PACS2Q86VP3 889 aa19.76■□□□□ 0.75
CPNE1-220ENST00000458038 GOT1L1Q8NHS2 421 aaPredicted RBP19.76■□□□□ 0.75
CPNE1-220ENST00000458038 NRGNQ92686 78 aa19.76■□□□□ 0.75
CPNE1-220ENST00000458038 DIO2Q92813 273 aa19.76■□□□□ 0.75
CPNE1-220ENST00000458038 RNASE6Q93091 150 aaKnown RBP19.76■□□□□ 0.75
CPNE1-220ENST00000458038 RMND5BQ96G75 393 aaPredicted RBP19.76■□□□□ 0.75
CPNE1-220ENST00000458038 ZNF717Q9BY31 904 aaPredicted RBP19.76■□□□□ 0.75
CPNE1-220ENST00000458038 CCM2LQ9NUG4 571 aaPredicted RBP19.76■□□□□ 0.75
CPNE1-220ENST00000458038 ZNF358Q9NW07 568 aa19.76■□□□□ 0.75
CPNE1-220ENST00000458038 TNPO3Q9Y5L0 923 aaKnown RBP19.76■□□□□ 0.75
CPNE1-220ENST00000458038 C15orf38-AP3S2A0A0A6YYH1 394 aa19.75■□□□□ 0.75
CPNE1-220ENST00000458038 A0A1W2PR48 441 aa19.75■□□□□ 0.75
CPNE1-220ENST00000458038 IL2RAP01589 272 aa19.75■□□□□ 0.75
CPNE1-220ENST00000458038 DNASE1P24855 282 aa19.75■□□□□ 0.75
CPNE1-220ENST00000458038 BSGP35613 385 aa19.75■□□□□ 0.75
CPNE1-220ENST00000458038 TRPC1P48995 793 aa19.75■□□□□ 0.75
CPNE1-220ENST00000458038 NRG3P56975 720 aa19.75■□□□□ 0.75
CPNE1-220ENST00000458038 PPP2R2AP63151 447 aa19.75■□□□□ 0.75
CPNE1-220ENST00000458038 DUSP8Q13202 625 aa19.75■□□□□ 0.75
CPNE1-220ENST00000458038 SETDB1Q15047 1291 aa19.75■□□□□ 0.75
CPNE1-220ENST00000458038 ACAP2Q15057 778 aa19.75■□□□□ 0.75
CPNE1-220ENST00000458038 ACSF3Q4G176 576 aaPredicted RBP19.75■□□□□ 0.75
CPNE1-220ENST00000458038 SEM1Q6ZVN7 128 aa19.75■□□□□ 0.75
CPNE1-220ENST00000458038 RNF175Q8N4F7 328 aa19.75■□□□□ 0.75
CPNE1-220ENST00000458038 ZNF441Q8N8Z8 693 aa19.75■□□□□ 0.75
CPNE1-220ENST00000458038 C17orf47Q8NEP4 570 aa19.75■□□□□ 0.75
CPNE1-220ENST00000458038 NXNL1Q96CM4 212 aa19.75■□□□□ 0.75
CPNE1-220ENST00000458038 HSPBAP1Q96EW2 488 aa19.75■□□□□ 0.75
CPNE1-220ENST00000458038 SH3GL2Q99962 352 aa19.75■□□□□ 0.75
CPNE1-220ENST00000458038 GPATCH1Q9BRR8 931 aaKnown RBP19.75■□□□□ 0.75
CPNE1-220ENST00000458038 CXorf21Q9HAI6 301 aa19.75■□□□□ 0.75
CPNE1-220ENST00000458038 GRHL1Q9NZI5 618 aa19.75■□□□□ 0.75
CPNE1-220ENST00000458038 CRIM1Q9NZV1 1036 aa19.75■□□□□ 0.75
CPNE1-220ENST00000458038 UTP11Q9Y3A2 253 aaKnown RBP19.75■□□□□ 0.75
CPNE1-220ENST00000458038 NPFFR2Q9Y5X5 522 aa19.75■□□□□ 0.75
CPNE1-220ENST00000458038 FLNAP21333 2647 aaKnown RBP19.74■□□□□ 0.75
CPNE1-220ENST00000458038 A6NNC1 897 aa19.74■□□□□ 0.75
CPNE1-220ENST00000458038 TMPRSS11DO60235 418 aa19.74■□□□□ 0.75
CPNE1-220ENST00000458038 EEDO75530 441 aaKnown RBP19.74■□□□□ 0.75
CPNE1-220ENST00000458038 FAM155BO75949 473 aa19.74■□□□□ 0.75
CPNE1-220ENST00000458038 SEMA3DO95025 777 aa19.74■□□□□ 0.75
CPNE1-220ENST00000458038 GFAPP14136 432 aa19.74■□□□□ 0.75
CPNE1-220ENST00000458038 BMP5P22003 454 aa19.74■□□□□ 0.75
CPNE1-220ENST00000458038 PIK3R1P27986 724 aa19.74■□□□□ 0.75
CPNE1-220ENST00000458038 MAGEA4P43358 317 aa19.74■□□□□ 0.75
CPNE1-220ENST00000458038 CRYZQ08257 329 aaKnown RBP19.74■□□□□ 0.75
CPNE1-220ENST00000458038 DAZAP2Q15038 168 aaPredicted RBP19.74■□□□□ 0.75
CPNE1-220ENST00000458038 PCBP2Q15366 365 aaKnown RBP eCLIP19.74■□□□□ 0.752e-7■■□□□ 12.7
CPNE1-220ENST00000458038 OR52E8Q6IFG1 317 aa19.74■□□□□ 0.75
CPNE1-220ENST00000458038 CAMKMTQ7Z624 323 aa19.74■□□□□ 0.75
CPNE1-220ENST00000458038 NUDT13Q86X67 352 aa19.74■□□□□ 0.75
CPNE1-220ENST00000458038 KIF18BQ86Y91 864 aa19.74■□□□□ 0.75
CPNE1-220ENST00000458038 L3MBTL4Q8NA19 623 aa19.74■□□□□ 0.75
CPNE1-220ENST00000458038 TIMP4Q99727 224 aa19.74■□□□□ 0.75
CPNE1-220ENST00000458038 ANGPTL4Q9BY76 406 aa19.74■□□□□ 0.75
CPNE1-220ENST00000458038 PRDM14Q9GZV8 571 aa19.74■□□□□ 0.75
CPNE1-220ENST00000458038 GLOD5A6NK44 160 aa19.73■□□□□ 0.75
CPNE1-220ENST00000458038 PRKRAO75569 313 aaKnown RBP19.73■□□□□ 0.75
CPNE1-220ENST00000458038 TRAPPC6AO75865 159 aa19.73■□□□□ 0.75
CPNE1-220ENST00000458038 GOSR1O95249 250 aa19.73■□□□□ 0.75
CPNE1-220ENST00000458038 HPNP05981 417 aa19.73■□□□□ 0.75
CPNE1-220ENST00000458038 GMPRP36959 345 aa19.73■□□□□ 0.75
CPNE1-220ENST00000458038 CDK9P50750 372 aaKnown RBP19.73■□□□□ 0.75
CPNE1-220ENST00000458038 FUT7Q11130 342 aa19.73■□□□□ 0.75
CPNE1-220ENST00000458038 CPSF6Q16630 551 aaKnown RBP eCLIP19.73■□□□□ 0.75
CPNE1-220ENST00000458038 PFKFB4Q16877 469 aa19.73■□□□□ 0.75
CPNE1-220ENST00000458038 NHSL2Q5HYW2 709 aa19.73■□□□□ 0.75
CPNE1-220ENST00000458038 C10orf62Q5T681 223 aaPredicted RBP19.73■□□□□ 0.75
CPNE1-220ENST00000458038 C6orf163Q5TEZ5 329 aa19.73■□□□□ 0.75
CPNE1-220ENST00000458038 NSUN5P2Q63ZY6 315 aa19.73■□□□□ 0.75
CPNE1-220ENST00000458038 VASNQ6EMK4 673 aa19.73■□□□□ 0.75
CPNE1-220ENST00000458038 KLC3Q6P597 504 aa19.73■□□□□ 0.75
CPNE1-220ENST00000458038 RELL2Q8NC24 303 aaPredicted RBP19.73■□□□□ 0.75
CPNE1-220ENST00000458038 SPATA4Q8NEY3 305 aa19.73■□□□□ 0.75
CPNE1-220ENST00000458038 OR7G1Q8NGA0 311 aa19.73■□□□□ 0.75
CPNE1-220ENST00000458038 SPPL2AQ8TCT8 520 aa19.73■□□□□ 0.75
CPNE1-220ENST00000458038 FBF1Q8TES7 1133 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms