RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 IGFBP5P24593 272 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 FPR2P25090 351 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 PSMB5P28074 263 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 UGT2B10P36537 528 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 SKIV2L2P42285 1042 aaKnown RBP1.92□□□□□ -2.1
NEDD1-204ENST00000457368 HMGA2P52926 109 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 DEFA6Q01524 100 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 GUSBP1Q15486 140 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 SYTL3Q4VX76 610 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 INTS11Q5TA45 600 aaKnown RBP1.92□□□□□ -2.1
NEDD1-204ENST00000457368 ITPRIPL1Q6GPH6 555 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 USP43Q70EL4 1123 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 ZNF567Q8N184 647 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 MPP5Q8N3R9 675 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP1.92□□□□□ -2.1
NEDD1-204ENST00000457368 SLC25A41Q8N5S1 370 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 MFSD9Q8NBP5 474 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 KCTD6Q8NC69 237 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 SLC16A11Q8NCK7 471 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 IPMKQ8NFU5 416 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 NEK11Q8NG66 645 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 OR5L2Q8NGL0 311 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 SLC22A8Q8TCC7 542 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 FAM216AQ8WUB2 273 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 TFB1MQ8WVM0 346 aaKnown RBP1.92□□□□□ -2.1
NEDD1-204ENST00000457368 HDAC2Q92769 488 aaKnown RBP1.92□□□□□ -2.1
NEDD1-204ENST00000457368 CTHRC1Q96CG8 243 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 REPS1Q96D71 796 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 PIK3IP1Q96FE7 263 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 QKIQ96PU8 341 aaKnown RBP eCLIP1.92□□□□□ -2.1
NEDD1-204ENST00000457368 CCDC77Q9BR77 488 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 NPLQ9BXD5 320 aaPredicted RBP1.92□□□□□ -2.1
NEDD1-204ENST00000457368 PCBD2Q9H0N5 130 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 LDAHQ9H6V9 325 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 MSL2Q9HCI7 577 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 ADAP2Q9NPF8 381 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 SMYD2Q9NRG4 433 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 C6orf203Q9P0P8 240 aaPredicted RBP1.92□□□□□ -2.1
NEDD1-204ENST00000457368 MYO1AQ9UBC5 1043 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 LIMA1Q9UHB6 759 aaKnown RBP1.92□□□□□ -2.1
NEDD1-204ENST00000457368 PCYOX1Q9UHG3 505 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 CNOT11Q9UKZ1 510 aaKnown RBP1.92□□□□□ -2.1
NEDD1-204ENST00000457368 TTC7AQ9ULT0 858 aaPredicted RBP1.92□□□□□ -2.1
NEDD1-204ENST00000457368 ERVK-11Q9UQG0 969 aa1.92□□□□□ -2.1
NEDD1-204ENST00000457368 DRG1Q9Y295 367 aaKnown RBP1.92□□□□□ -2.1
NEDD1-204ENST00000457368 ZNF407Q9C0G0 2248 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 GOLGA8QA0A0J9YX86 632 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 A0A1W2PNV4 684 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 GOLGA8OA6NCC3 632 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 TRIM64CA6NLI5 447 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 EEF1E1-BLOC1S5C9J1V9 151 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 E7ENX8 843 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 GOLGA8NF8WBI6 632 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 C16orf97H3BN30 126 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 GOLGA8RI6L899 631 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 MYO1FO00160 1098 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 HAT1O14929 419 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 PRODHO43272 600 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 EEF1E1O43324 174 aaKnown RBP1.91□□□□□ -2.1
NEDD1-204ENST00000457368 CHST10O43529 356 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 RDH16O75452 317 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 PRKD3O94806 890 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 IGHV4-39P01824 125 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 THBDP07204 575 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 RHOXF2BP0C7M4 288 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 CCL3P10147 92 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 CR1P17927 2039 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 ALOX12P18054 663 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 RPA3P35244 121 aaPredicted RBP1.91□□□□□ -2.1
NEDD1-204ENST00000457368 SOX3P41225 446 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 KLK7P49862 253 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 HSD17B7P56937 341 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 TAS2R40P59535 323 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 DUSP8Q13202 625 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 TFDP2Q14188 446 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 RCAN2Q14206 197 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 GALEQ14376 348 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 KRT31Q15323 416 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 ELAVL1Q15717 326 aaKnown RBP1.91□□□□□ -2.1
NEDD1-204ENST00000457368 BCL2A1Q16548 175 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 XKR6Q5GH73 641 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 FAM120AOSQ5T036 256 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 SLC22A10Q63ZE4 541 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 OR2A2Q6IF42 318 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.91□□□□□ -2.14e-9■■■■■ 34.1
NEDD1-204ENST00000457368 FAM47EQ6ZV65 393 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 SSX8Q7RTT4 187 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 PRSS41Q7RTY9 318 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 ZNF571Q7Z3V5 609 aaPredicted RBP1.91□□□□□ -2.1
NEDD1-204ENST00000457368 TBC1D1Q86TI0 1168 aaPredicted RBP1.91□□□□□ -2.1
NEDD1-204ENST00000457368 ASPGQ86U10 573 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 TMEM132CQ8N3T6 1108 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 ARL6IP6Q8N6S5 226 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 NKAIN3Q8N8D7 197 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 C1orf162Q8NEQ5 155 aaPredicted RBP1.91□□□□□ -2.1
NEDD1-204ENST00000457368 ABHD11Q8NFV4 315 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 OR4K1Q8NGD4 311 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 NAT14Q8WUY8 206 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 RAPGEF5Q92565 580 aa1.91□□□□□ -2.1
NEDD1-204ENST00000457368 KIAA1191Q96A73 305 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms