RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 SSTR4P31391 388 aa16.74■□□□□ 0.27
PDLIM2-215ENST00000456545 MEOX1P50221 254 aa16.74■□□□□ 0.27
PDLIM2-215ENST00000456545 SLC37A1P57057 533 aa16.74■□□□□ 0.27
PDLIM2-215ENST00000456545 KRTCAP3Q53RY4 240 aa16.74■□□□□ 0.27
PDLIM2-215ENST00000456545 ARL13AQ5H913 290 aaPredicted RBP16.74■□□□□ 0.27
PDLIM2-215ENST00000456545 GALNT18Q6P9A2 607 aa16.74■□□□□ 0.27
PDLIM2-215ENST00000456545 RTL4Q6ZR62 310 aa16.74■□□□□ 0.27
PDLIM2-215ENST00000456545 ZCCHC23Q6ZST2 131 aa16.74■□□□□ 0.27
PDLIM2-215ENST00000456545 MDGA2Q7Z553 956 aa16.74■□□□□ 0.27
PDLIM2-215ENST00000456545 ZNF227Q86WZ6 799 aa16.74■□□□□ 0.27
PDLIM2-215ENST00000456545 DDIASQ8IXT1 998 aa16.74■□□□□ 0.27
PDLIM2-215ENST00000456545 CLYBLQ8N0X4 340 aa16.74■□□□□ 0.27
PDLIM2-215ENST00000456545 TAGAPQ8N103 731 aa16.74■□□□□ 0.27
PDLIM2-215ENST00000456545 LRRC25Q8N386 305 aaPredicted RBP16.74■□□□□ 0.27
PDLIM2-215ENST00000456545 CPSF7Q8N684 471 aaKnown RBP16.74■□□□□ 0.27
PDLIM2-215ENST00000456545 SLC15A4Q8N697 577 aa16.74■□□□□ 0.27
PDLIM2-215ENST00000456545 POGLUT1Q8NBL1 392 aa16.74■□□□□ 0.27
PDLIM2-215ENST00000456545 PSD4Q8NDX1 1056 aa16.74■□□□□ 0.27
PDLIM2-215ENST00000456545 EXOSC8Q96B26 276 aaKnown RBP16.74■□□□□ 0.27
PDLIM2-215ENST00000456545 STMN4Q9H169 189 aaPredicted RBP16.74■□□□□ 0.27
PDLIM2-215ENST00000456545 OR10A5Q9H207 317 aa16.74■□□□□ 0.27
PDLIM2-215ENST00000456545 TNFRSF12AQ9NP84 129 aa16.74■□□□□ 0.27
PDLIM2-215ENST00000456545 MIEF1Q9NQG6 463 aa16.74■□□□□ 0.27
PDLIM2-215ENST00000456545 HEY2Q9UBP5 337 aa16.74■□□□□ 0.27
PDLIM2-215ENST00000456545 NPIPA1Q9UND3 350 aa16.74■□□□□ 0.27
PDLIM2-215ENST00000456545 SLC5A6Q9Y289 635 aa16.74■□□□□ 0.27
PDLIM2-215ENST00000456545 TRAF6Q9Y4K3 522 aa16.74■□□□□ 0.27
PDLIM2-215ENST00000456545 POLR3HQ9Y535 204 aaPredicted RBP16.74■□□□□ 0.27
PDLIM2-215ENST00000456545 WDR91A4D1P6 747 aa16.73■□□□□ 0.27
PDLIM2-215ENST00000456545 ASPDHA6ND91 283 aa16.73■□□□□ 0.27
PDLIM2-215ENST00000456545 CAPN14A8MX76 684 aa16.73■□□□□ 0.27
PDLIM2-215ENST00000456545 TYROBPO43914 113 aa16.73■□□□□ 0.27
PDLIM2-215ENST00000456545 P04436 131 aa16.73■□□□□ 0.27
PDLIM2-215ENST00000456545 LINC00032P0C843 101 aa16.73■□□□□ 0.27
PDLIM2-215ENST00000456545 ZNF24P17028 368 aa16.73■□□□□ 0.27
PDLIM2-215ENST00000456545 SERPINB5P36952 375 aa16.73■□□□□ 0.27
PDLIM2-215ENST00000456545 KCNK10P57789 538 aa16.73■□□□□ 0.27
PDLIM2-215ENST00000456545 GPR85P60893 370 aa16.73■□□□□ 0.27
PDLIM2-215ENST00000456545 PLGLB1Q02325 96 aa16.73■□□□□ 0.27
PDLIM2-215ENST00000456545 ZNF763Q0D2J5 394 aa16.73■□□□□ 0.27
PDLIM2-215ENST00000456545 SH2D4BQ5SQS7 431 aa16.73■□□□□ 0.27
PDLIM2-215ENST00000456545 FAM180BQ6P0A1 224 aa16.73■□□□□ 0.27
PDLIM2-215ENST00000456545 LRIG3Q6UXM1 1119 aa16.73■□□□□ 0.27
PDLIM2-215ENST00000456545 EXOC3L1Q86VI1 746 aa16.73■□□□□ 0.27
PDLIM2-215ENST00000456545 CCDC116Q8IYX3 515 aa16.73■□□□□ 0.27
PDLIM2-215ENST00000456545 VWA5B2Q8N398 1253 aa16.73■□□□□ 0.27
PDLIM2-215ENST00000456545 ADCY4Q8NFM4 1077 aa16.73■□□□□ 0.27
PDLIM2-215ENST00000456545 OR7G1Q8NGA0 311 aa16.73■□□□□ 0.27
PDLIM2-215ENST00000456545 FAM76AQ8TAV0 307 aa16.73■□□□□ 0.27
PDLIM2-215ENST00000456545 AGR3Q8TD06 166 aa16.73■□□□□ 0.27
PDLIM2-215ENST00000456545 SGCZQ96LD1 299 aa16.73■□□□□ 0.27
PDLIM2-215ENST00000456545 FRMD6Q96NE9 622 aa16.73■□□□□ 0.27
PDLIM2-215ENST00000456545 BBS4Q96RK4 519 aa16.73■□□□□ 0.27
PDLIM2-215ENST00000456545 WWTR1Q9GZV5 400 aa16.73■□□□□ 0.27
PDLIM2-215ENST00000456545 TSPAN10Q9H1Z9 355 aaPredicted RBP16.73■□□□□ 0.27
PDLIM2-215ENST00000456545 LRTM1Q9HBL6 345 aa16.73■□□□□ 0.27
PDLIM2-215ENST00000456545 C1orf109Q9NX04 203 aa16.73■□□□□ 0.27
PDLIM2-215ENST00000456545 SIRT5Q9NXA8 310 aa16.73■□□□□ 0.27
PDLIM2-215ENST00000456545 CFL2Q9Y281 166 aa16.73■□□□□ 0.27
PDLIM2-215ENST00000456545 TFECO14948 347 aaPredicted RBP16.72■□□□□ 0.27
PDLIM2-215ENST00000456545 SEMA7AO75326 666 aa16.72■□□□□ 0.27
PDLIM2-215ENST00000456545 ATP1B1P05026 303 aa16.72■□□□□ 0.27
PDLIM2-215ENST00000456545 CHRNGP07510 517 aa16.72■□□□□ 0.27
PDLIM2-215ENST00000456545 FGF4P08620 206 aa16.72■□□□□ 0.27
PDLIM2-215ENST00000456545 CT62P0C5K7 136 aa16.72■□□□□ 0.27
PDLIM2-215ENST00000456545 MPIP34949 423 aa16.72■□□□□ 0.27
PDLIM2-215ENST00000456545 NR0B1P51843 470 aaKnown RBP16.72■□□□□ 0.27
PDLIM2-215ENST00000456545 TDGF1P3P51864 188 aa16.72■□□□□ 0.27
PDLIM2-215ENST00000456545 CASP6P55212 293 aa16.72■□□□□ 0.27
PDLIM2-215ENST00000456545 NRG3P56975 720 aa16.72■□□□□ 0.27
PDLIM2-215ENST00000456545 SRSF1Q07955 248 aaKnown RBP eCLIP16.72■□□□□ 0.27
PDLIM2-215ENST00000456545 FUT7Q11130 342 aa16.72■□□□□ 0.27
PDLIM2-215ENST00000456545 MAP4K2Q12851 820 aa16.72■□□□□ 0.27
PDLIM2-215ENST00000456545 NOXRED1Q6NXP6 359 aa16.72■□□□□ 0.27
PDLIM2-215ENST00000456545 FAM111BQ6SJ93 734 aa16.72■□□□□ 0.27
PDLIM2-215ENST00000456545 FAM13CQ8NE31 585 aa16.72■□□□□ 0.27
PDLIM2-215ENST00000456545 SSC4DQ8WTU2 575 aa16.72■□□□□ 0.27
PDLIM2-215ENST00000456545 CNRIP1Q96F85 164 aaPredicted RBP16.72■□□□□ 0.27
PDLIM2-215ENST00000456545 METTL2AQ96IZ6 378 aaKnown RBP16.72■□□□□ 0.27
PDLIM2-215ENST00000456545 SSU72Q9NP77 194 aaKnown RBP16.72■□□□□ 0.27
PDLIM2-215ENST00000456545 SACM1LQ9NTJ5 587 aa16.72■□□□□ 0.27
PDLIM2-215ENST00000456545 WBP11Q9Y2W2 641 aaKnown RBP16.72■□□□□ 0.27
PDLIM2-215ENST00000456545 TENM4Q6N022 2769 aa16.72■□□□□ 0.27
PDLIM2-215ENST00000456545 RP1L1Q8IWN7 2480 aaPredicted RBP16.72■□□□□ 0.27
PDLIM2-215ENST00000456545 TM9SF1O15321 606 aa16.71■□□□□ 0.27
PDLIM2-215ENST00000456545 LRRTM2O43300 516 aa16.71■□□□□ 0.27
PDLIM2-215ENST00000456545 ASNA1O43681 348 aa16.71■□□□□ 0.27
PDLIM2-215ENST00000456545 CNR1P21554 472 aa16.71■□□□□ 0.27
PDLIM2-215ENST00000456545 RFC3P40938 356 aa16.71■□□□□ 0.27
PDLIM2-215ENST00000456545 PER3P56645 1201 aa16.71■□□□□ 0.27
PDLIM2-215ENST00000456545 EBPQ15125 230 aaKnown RBP16.71■□□□□ 0.27
PDLIM2-215ENST00000456545 PRICKLE4Q2TBC4 344 aa16.71■□□□□ 0.27
PDLIM2-215ENST00000456545 SLC22A10Q63ZE4 541 aa16.71■□□□□ 0.27
PDLIM2-215ENST00000456545 KANK2Q63ZY3 851 aa16.71■□□□□ 0.27
PDLIM2-215ENST00000456545 FAM47EQ6ZV65 393 aa16.71■□□□□ 0.27
PDLIM2-215ENST00000456545 DND1Q8IYX4 353 aaKnown RBP16.71■□□□□ 0.27
PDLIM2-215ENST00000456545 GOLM1Q8NBJ4 401 aa16.71■□□□□ 0.27
PDLIM2-215ENST00000456545 TWIST2Q8WVJ9 160 aa16.71■□□□□ 0.27
PDLIM2-215ENST00000456545 TP53INP1Q96A56 240 aa16.71■□□□□ 0.27
PDLIM2-215ENST00000456545 GPR137Q96N19 417 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms