RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 CNPPD1Q9BV87 410 aa16.07■□□□□ 0.16
USP39-208ENST00000455732 EML4Q9HC35 981 aaKnown RBP16.07■□□□□ 0.16
USP39-208ENST00000455732 KLHL1Q9NR64 748 aa16.07■□□□□ 0.16
USP39-208ENST00000455732 EHD3Q9NZN3 535 aa16.07■□□□□ 0.16
USP39-208ENST00000455732 HEY2Q9UBP5 337 aa16.07■□□□□ 0.16
USP39-208ENST00000455732 ERVK-19Q9WJR5 959 aa16.07■□□□□ 0.16
USP39-208ENST00000455732 SLC5A6Q9Y289 635 aa16.07■□□□□ 0.16
USP39-208ENST00000455732 DLGAP4Q9Y2H0 992 aa16.07■□□□□ 0.16
USP39-208ENST00000455732 WBP11Q9Y2W2 641 aaKnown RBP16.07■□□□□ 0.16
USP39-208ENST00000455732 PCNX1Q96RV3 2341 aa16.07■□□□□ 0.16
USP39-208ENST00000455732 CROCCQ5TZA2 2017 aa16.06■□□□□ 0.16
USP39-208ENST00000455732 SLC28A1O00337 649 aa16.06■□□□□ 0.16
USP39-208ENST00000455732 CHEK2O96017 543 aa16.06■□□□□ 0.16
USP39-208ENST00000455732 CLPSP04118 112 aa16.06■□□□□ 0.16
USP39-208ENST00000455732 IL3P08700 152 aa16.06■□□□□ 0.16
USP39-208ENST00000455732 CSNK2A2P19784 350 aaPredicted RBP16.06■□□□□ 0.16
USP39-208ENST00000455732 SERPINB4P48594 390 aa16.06■□□□□ 0.16
USP39-208ENST00000455732 SRSF11Q05519 484 aaKnown RBP16.06■□□□□ 0.16
USP39-208ENST00000455732 ZNF763Q0D2J5 394 aa16.06■□□□□ 0.16
USP39-208ENST00000455732 FUT7Q11130 342 aa16.06■□□□□ 0.16
USP39-208ENST00000455732 ZNF267Q14586 743 aaPredicted RBP16.06■□□□□ 0.16
USP39-208ENST00000455732 HEPACAMQ14CZ8 416 aa16.06■□□□□ 0.16
USP39-208ENST00000455732 SPDYAQ5MJ70 313 aa16.06■□□□□ 0.16
USP39-208ENST00000455732 RNF111Q6ZNA4 994 aa16.06■□□□□ 0.16
USP39-208ENST00000455732 C16orf47Q6ZP98 133 aaPredicted RBP16.06■□□□□ 0.16
USP39-208ENST00000455732 ZCCHC23Q6ZST2 131 aa16.06■□□□□ 0.16
USP39-208ENST00000455732 GALNTL5Q7Z4T8 443 aa16.06■□□□□ 0.16
USP39-208ENST00000455732 C16orf78Q8WTQ4 265 aa16.06■□□□□ 0.16
USP39-208ENST00000455732 ASB15Q8WXK1 588 aa16.06■□□□□ 0.16
USP39-208ENST00000455732 KLHL29Q96CT2 875 aa16.06■□□□□ 0.16
USP39-208ENST00000455732 ZNF681Q96N22 645 aa16.06■□□□□ 0.16
USP39-208ENST00000455732 LIN28AQ9H9Z2 209 aaKnown RBP16.06■□□□□ 0.16
USP39-208ENST00000455732 DNAJC15Q9Y5T4 150 aa16.06■□□□□ 0.16
USP39-208ENST00000455732 A8MVJ9 347 aa16.05■□□□□ 0.16
USP39-208ENST00000455732 WWP2O00308 870 aa16.05■□□□□ 0.16
USP39-208ENST00000455732 BIRC5O15392 142 aa16.05■□□□□ 0.16
USP39-208ENST00000455732 RGS14O43566 566 aa16.05■□□□□ 0.16
USP39-208ENST00000455732 WISP2O76076 250 aa16.05■□□□□ 0.16
USP39-208ENST00000455732 STSP08842 583 aa16.05■□□□□ 0.16
USP39-208ENST00000455732 ANXA4P09525 319 aaPredicted RBP16.05■□□□□ 0.16
USP39-208ENST00000455732 MYZAPP0CAP1 466 aa16.05■□□□□ 0.16
USP39-208ENST00000455732 DHRS4L1P0CG22 281 aa16.05■□□□□ 0.16
USP39-208ENST00000455732 SOX3P41225 446 aa16.05■□□□□ 0.16
USP39-208ENST00000455732 BTKQ06187 659 aa16.05■□□□□ 0.16
USP39-208ENST00000455732 KIAA0040Q15053 153 aa16.05■□□□□ 0.16
USP39-208ENST00000455732 EBPQ15125 230 aaKnown RBP16.05■□□□□ 0.16
USP39-208ENST00000455732 ZNF750Q32MQ0 723 aa16.05■□□□□ 0.16
USP39-208ENST00000455732 UGT3A2Q3SY77 523 aa16.05■□□□□ 0.16
USP39-208ENST00000455732 C4orf17Q53FE4 359 aa16.05■□□□□ 0.16
USP39-208ENST00000455732 PIGGQ5H8A4 983 aa16.05■□□□□ 0.16
USP39-208ENST00000455732 C6orf163Q5TEZ5 329 aa16.05■□□□□ 0.16
USP39-208ENST00000455732 SLC29A4Q7RTT9 530 aa16.05■□□□□ 0.16
USP39-208ENST00000455732 SAMD14Q8IZD0 417 aaPredicted RBP16.05■□□□□ 0.16
USP39-208ENST00000455732 CLYBLQ8N0X4 340 aa16.05■□□□□ 0.16
USP39-208ENST00000455732 SLC15A4Q8N697 577 aa16.05■□□□□ 0.16
USP39-208ENST00000455732 FAM98AQ8NCA5 519 aaKnown RBP16.05■□□□□ 0.16
USP39-208ENST00000455732 OR7G1Q8NGA0 311 aa16.05■□□□□ 0.16
USP39-208ENST00000455732 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.05■□□□□ 0.16
USP39-208ENST00000455732 CNRIP1Q96F85 164 aaPredicted RBP16.05■□□□□ 0.16
USP39-208ENST00000455732 FCRL1Q96LA6 429 aa16.05■□□□□ 0.16
USP39-208ENST00000455732 FRMD6Q96NE9 622 aa16.05■□□□□ 0.16
USP39-208ENST00000455732 EBPLQ9BY08 206 aa16.05■□□□□ 0.16
USP39-208ENST00000455732 WWTR1Q9GZV5 400 aa16.05■□□□□ 0.16
USP39-208ENST00000455732 STMN4Q9H169 189 aaPredicted RBP16.05■□□□□ 0.16
USP39-208ENST00000455732 CENPHQ9H3R5 247 aa16.05■□□□□ 0.16
USP39-208ENST00000455732 TUBB1Q9H4B7 451 aa16.05■□□□□ 0.16
USP39-208ENST00000455732 MYNNQ9NPC7 610 aa16.05■□□□□ 0.16
USP39-208ENST00000455732 HPF1Q9NWY4 346 aa16.05■□□□□ 0.16
USP39-208ENST00000455732 UTS2RQ9UKP6 389 aa16.05■□□□□ 0.16
USP39-208ENST00000455732 OSGIN2Q9Y236 505 aa16.05■□□□□ 0.16
USP39-208ENST00000455732 KLF13Q9Y2Y9 288 aaPredicted RBP16.05■□□□□ 0.16
USP39-208ENST00000455732 TRAF6Q9Y4K3 522 aa16.05■□□□□ 0.16
USP39-208ENST00000455732 ZNF780BQ9Y6R6 833 aa16.05■□□□□ 0.16
USP39-208ENST00000455732 CENPEQ02224 2701 aa16.04■□□□□ 0.16
USP39-208ENST00000455732 ERAL1O75616 437 aaKnown RBP16.04■□□□□ 0.16
USP39-208ENST00000455732 OR6B1O95007 311 aa16.04■□□□□ 0.16
USP39-208ENST00000455732 ZWINTO95229 277 aa16.04■□□□□ 0.16
USP39-208ENST00000455732 NADKO95544 446 aaPredicted RBP16.04■□□□□ 0.16
USP39-208ENST00000455732 CT62P0C5K7 136 aa16.04■□□□□ 0.16
USP39-208ENST00000455732 NT5EP21589 574 aa16.04■□□□□ 0.16
USP39-208ENST00000455732 ARRB2P32121 409 aa16.04■□□□□ 0.16
USP39-208ENST00000455732 ALDH9A1P49189 494 aa16.04■□□□□ 0.16
USP39-208ENST00000455732 KCNK10P57789 538 aa16.04■□□□□ 0.16
USP39-208ENST00000455732 MAP4K2Q12851 820 aa16.04■□□□□ 0.16
USP39-208ENST00000455732 CEBPEQ15744 281 aa16.04■□□□□ 0.16
USP39-208ENST00000455732 MAPKAPK3Q16644 382 aa16.04■□□□□ 0.16
USP39-208ENST00000455732 PRICKLE4Q2TBC4 344 aa16.04■□□□□ 0.16
USP39-208ENST00000455732 NOXRED1Q6NXP6 359 aa16.04■□□□□ 0.16
USP39-208ENST00000455732 OPN5Q6U736 354 aa16.04■□□□□ 0.16
USP39-208ENST00000455732 Q6ZSR9 355 aa16.04■□□□□ 0.16
USP39-208ENST00000455732 IKBIPQ70UQ0 350 aa16.04■□□□□ 0.16
USP39-208ENST00000455732 NUDCD3Q8IVD9 361 aa16.04■□□□□ 0.16
USP39-208ENST00000455732 LRRC25Q8N386 305 aaPredicted RBP16.04■□□□□ 0.16
USP39-208ENST00000455732 VWA5B2Q8N398 1253 aa16.04■□□□□ 0.16
USP39-208ENST00000455732 ZNF615Q8N8J6 731 aa16.04■□□□□ 0.16
USP39-208ENST00000455732 ZNF441Q8N8Z8 693 aa16.04■□□□□ 0.16
USP39-208ENST00000455732 GOLM1Q8NBJ4 401 aa16.04■□□□□ 0.16
USP39-208ENST00000455732 SLC22A8Q8TCC7 542 aa16.04■□□□□ 0.16
USP39-208ENST00000455732 TWIST2Q8WVJ9 160 aa16.04■□□□□ 0.16
USP39-208ENST00000455732 SGCZQ96LD1 299 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms