RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 LRRC3CA6NJW4 275 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 SYCE1LA8MT33 242 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 E7ESA3 106 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 CCDC188H7C350 402 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 K7EPI3 171 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 ZNF354AO60765 605 aaPredicted RBP7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 TRIM3O75382 744 aaPredicted RBP7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 TRAPPC6AO75865 159 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 WISP3O95389 354 aaPredicted RBP7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 GPR75O95800 540 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 TGFB1P01137 390 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 RFPL3SP0C7P2 107 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 NR2F6P10588 404 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 CD1DP15813 335 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 EPB42P16452 691 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 KRT15P19012 456 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 CD22P20273 847 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 TACR1P25103 407 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 CTSSP25774 331 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 PTX3P26022 381 aaPredicted RBP7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 GP5P40197 560 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 MASP1P48740 699 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 RAB10P61026 200 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 HERVK_113P63132 956 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 ERVK-8P63133 956 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 ADAM8P78325 824 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 CRYZQ08257 329 aaKnown RBP7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 CBLBQ13191 982 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 DUSP8Q13202 625 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 RCAN2Q14206 197 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 ZNF267Q14586 743 aaPredicted RBP7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 RPS6KA2Q15349 733 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 NHSL2Q5HYW2 709 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 DEPDC1Q5TB30 811 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 NSUN5P2Q63ZY6 315 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 ADNP2Q6IQ32 1131 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 GRHL2Q6ISB3 625 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 CYS1Q717R9 158 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 CCDC91Q7Z6B0 441 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 ZBED8Q8IZ13 594 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 SLC35F6Q8N357 371 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 RELL2Q8NC24 303 aaPredicted RBP7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 OR7G3Q8NG95 312 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 PYROXD1Q8WU10 500 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 UBTD2Q8WUN7 234 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 DIO2Q92813 273 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 NTNG2Q96CW9 530 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 GPR22Q99680 433 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 YIPF4Q9BSR8 244 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 MCMBPQ9BTE3 642 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 ERVK-6Q9BXR3 956 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 PRDM14Q9GZV8 571 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 ACBD3Q9H3P7 528 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 NMRAL1Q9HBL8 299 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 BEX4Q9NWD9 120 aaPredicted RBP7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 CNOT11Q9UKZ1 510 aaKnown RBP7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 ERVK-19Q9WJR5 959 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 RPH3AQ9Y2J0 694 aaPredicted RBP7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 ANGPTL3Q9Y5C1 460 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 FLNAP21333 2647 aaKnown RBP7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 EXPH5Q8NEV8 1989 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 MBD3L4A6NDZ8 208 aaPredicted RBP7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 MBD3L3A6NE82 208 aaPredicted RBP7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 MBD3L5A6NJ08 208 aaPredicted RBP7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 EFCAB8A8MWE9 144 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 SUPT3HB4E1H0 165 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 EEF1E1-BLOC1S5C9J1V9 151 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 RTCAO00442 366 aaKnown RBP7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 EIF3HO15372 352 aaKnown RBP eCLIP7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 ARHGEF9O43307 516 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 EEF1E1O43324 174 aaKnown RBP7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 UGDHO60701 494 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 PRAMEF4O60810 478 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 KERAO60938 352 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 ERN1O75460 977 aaKnown RBP7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 SUPT3HO75486 399 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 ATE1O95260 518 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 ACTL6AO96019 429 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 HPNP05981 417 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 GSTA2P09210 222 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 SLC35E2BP0CK96 405 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 SLC35E2P0CK97 266 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 CRABP2P29373 138 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 ADSLP30566 484 aaPredicted RBP7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 SPRP35270 261 aaPredicted RBP7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 PIK3CGP48736 1102 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 TRPC1P48995 793 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 CDK9P50750 372 aaKnown RBP7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 SLC37A1P57057 533 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 CUL3Q13618 768 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 DDX39BQ13838 428 aaKnown RBP7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 SETDB1Q15047 1291 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 EBPQ15125 230 aaKnown RBP7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 TOMM20Q15388 145 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 OR4D1Q15615 310 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 ZKSCAN8Q15776 578 aaPredicted RBP7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 C10orf62Q5T681 223 aaPredicted RBP7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 PRAMEF9Q5VWM5 478 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 SHEQ5VZ18 495 aa7.35□□□□□ -1.23
NIF3L1-209ENST00000454952 LIPJQ5W064 366 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms