RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 ATP6V1HQ9UI12 483 aa3.61□□□□□ -1.83
HMGN3P1-201ENST00000453847 SMC3Q9UQE7 1217 aa3.61□□□□□ -1.83
HMGN3P1-201ENST00000453847 NIP7Q9Y221 180 aaKnown RBP eCLIP3.61□□□□□ -1.83
HMGN3P1-201ENST00000453847 TCF19Q9Y242 345 aa3.61□□□□□ -1.83
HMGN3P1-201ENST00000453847 NAALAD2Q9Y3Q0 740 aa3.61□□□□□ -1.83
HMGN3P1-201ENST00000453847 ANGPTL3Q9Y5C1 460 aa3.61□□□□□ -1.83
HMGN3P1-201ENST00000453847 ATP10DQ9P241 1426 aa3.61□□□□□ -1.83
HMGN3P1-201ENST00000453847 MEI4A8MW99 385 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 SMIM1B2RUZ4 78 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 SLC1A7O00341 560 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 ZNF195O14628 629 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 OR1F1O43749 312 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 NUDT21O43809 227 aaKnown RBP3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 SNNO75324 88 aaPredicted RBP3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 CDC123O75794 336 aaPredicted RBP3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 ANXA9O76027 345 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 TOXO94900 526 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 AP2A2O94973 939 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 CLPTM1O96005 669 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 OAS1P00973 400 aaKnown RBP3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 IL1BP01584 269 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 CPN1P15169 458 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 UQCRC2P22695 453 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 THBS3P49746 956 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 MRPS21P82921 87 aaKnown RBP3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 TNFRSF17Q02223 184 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 POU3F1Q03052 451 aaPredicted RBP3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 SLC17A1Q14916 467 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 EFTUD2Q15029 972 aaKnown RBP eCLIP3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 CFAP221Q4G0U5 840 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 ZNF311Q5JNZ3 666 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 FAM53AQ6NSI3 398 aaPredicted RBP3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 SPSB3Q6PJ21 355 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 C19orf48Q6RUI8 117 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 Q71RC1 249 aaPredicted RBP3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 CCDC36Q8IYA8 594 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 DDHD1Q8NEL9 900 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 OR5AP2Q8NGF4 316 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 OR8J1Q8NGP2 316 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 RDH11Q8TC12 318 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 SMAP2Q8WU79 429 aaPredicted RBP3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 ADIPOR1Q96A54 375 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 VPS35Q96QK1 796 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 KRT12Q99456 494 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 ALG12Q9BV10 488 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 ALG9Q9H6U8 611 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 DCTPP1Q9H773 170 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 TRPV5Q9NQA5 729 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 RBM28Q9NW13 759 aaKnown RBP3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 GDAP2Q9NXN4 497 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 ERRFI1Q9UJM3 462 aaPredicted RBP3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 ICAM5Q9UMF0 924 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 MRPS7Q9Y2R9 242 aaKnown RBP3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 PCDHGB1Q9Y5G3 927 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 STK36Q9NRP7 1315 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 NSD2O96028 1365 aa3.6□□□□□ -1.83
HMGN3P1-201ENST00000453847 C15orf38-AP3S2A0A0A6YYH1 394 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 LOC390937A0A1W2PQ73 354 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 ESYT2A0FGR8 921 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 XKRY2A2RUG3 117 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 GSAPA4D1B5 854 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 CCDC169A6NNP5 214 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 ZNF724A8MTY0 619 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 BUB1O43683 1085 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 SDC3O75056 442 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 KIAA0754O94854 1291 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 NTN1O95631 604 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 CRYAAP02489 173 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 ATP1A1P05023 1023 aaKnown RBP3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 UGT2B4P06133 528 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 IGKV2-30P06310 120 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 F7P08709 466 aaPredicted RBP3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 ANXA4P09525 319 aaPredicted RBP3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 NT5EP21589 574 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 GIFP27352 417 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 TIMP3P35625 211 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 ID1P41134 155 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 MATKP42679 507 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 PGFP49763 221 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 RAG2P55895 527 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 PPIAP62937 165 aaKnown RBP3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 NUCB2P80303 420 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 MRPS6P82932 125 aaKnown RBP3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 PARP6Q2NL67 630 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 POM121L1PQ3SYA9 428 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 TMEM52BQ4KMG9 183 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 LRRC23Q53EV4 343 aaPredicted RBP3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 TCHHL1Q5QJ38 904 aaPredicted RBP3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 TPGS2Q68CL5 300 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 RHBDD2Q6NTF9 364 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 ZNF562Q6V9R5 426 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 ZNF730Q6ZMV8 503 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 ZNF841Q6ZN19 808 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 Q6ZRP5 223 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 SH2D5Q6ZV89 423 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 PARGQ86W56 976 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 GPBP1Q86WP2 473 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 CATSPERDQ86XM0 798 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 CDH26Q8IXH8 852 aa3.59□□□□□ -1.83
HMGN3P1-201ENST00000453847 GVQW1Q8N7I0 195 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms