RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 HMGCS1Q01581 520 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 DUSP2Q05923 314 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 RBPJQ06330 500 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 PCLAFQ15004 111 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 HIST2H2BCQ6DN03 193 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 GALNT18Q6P9A2 607 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 EMBQ6PCB8 327 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 BNC2Q6ZN30 1099 aaPredicted RBP13.46□□□□□ -0.25
HSPG2-207ENST00000453796 RTL4Q6ZR62 310 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 FGD2Q7Z6J4 655 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 GHDCQ8N2G8 530 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 SLC15A4Q8N697 577 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 ZNF615Q8N8J6 731 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 BANPQ8N9N5 519 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 OR2M7Q8NG81 312 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 SGCZQ96LD1 299 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 PLSCR2Q9NRY7 297 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 RYDENQ9NUL5 291 aaKnown RBP13.46□□□□□ -0.25
HSPG2-207ENST00000453796 SIRT5Q9NXA8 310 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 HEY2Q9UBP5 337 aa13.46□□□□□ -0.25
HSPG2-207ENST00000453796 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.46□□□□□ -0.25
HSPG2-207ENST00000453796 V9GYY5 206 aaPredicted RBP13.46□□□□□ -0.25
HSPG2-207ENST00000453796 FREM3P0C091 2139 aa13.45□□□□□ -0.26
HSPG2-207ENST00000453796 TRGV8A0A0C4DH27 118 aa13.45□□□□□ -0.26
HSPG2-207ENST00000453796 ZG16O60844 167 aa13.45□□□□□ -0.26
HSPG2-207ENST00000453796 ATP1B1P05026 303 aa13.45□□□□□ -0.26
HSPG2-207ENST00000453796 CCL3P10147 92 aa13.45□□□□□ -0.26
HSPG2-207ENST00000453796 CNR1P21554 472 aa13.45□□□□□ -0.26
HSPG2-207ENST00000453796 PTGER1P34995 402 aa13.45□□□□□ -0.26
HSPG2-207ENST00000453796 HSF1Q00613 529 aa13.45□□□□□ -0.26
HSPG2-207ENST00000453796 MGAT2Q10469 447 aa13.45□□□□□ -0.26
HSPG2-207ENST00000453796 C3AR1Q16581 482 aa13.45□□□□□ -0.26
HSPG2-207ENST00000453796 PRICKLE4Q2TBC4 344 aa13.45□□□□□ -0.26
HSPG2-207ENST00000453796 SPIN4Q56A73 249 aa13.45□□□□□ -0.26
HSPG2-207ENST00000453796 CMPK2Q5EBM0 449 aa13.45□□□□□ -0.26
HSPG2-207ENST00000453796 LIPMQ5VYY2 423 aa13.45□□□□□ -0.26
HSPG2-207ENST00000453796 SCIMPQ6UWF3 145 aa13.45□□□□□ -0.26
HSPG2-207ENST00000453796 SLC29A4Q7RTT9 530 aa13.45□□□□□ -0.26
HSPG2-207ENST00000453796 MAMDC2Q7Z304 686 aaPredicted RBP13.45□□□□□ -0.26
HSPG2-207ENST00000453796 SPPL2CQ8IUH8 684 aa13.45□□□□□ -0.26
HSPG2-207ENST00000453796 GALNT12Q8IXK2 581 aa13.45□□□□□ -0.26
HSPG2-207ENST00000453796 SLC22A8Q8TCC7 542 aa13.45□□□□□ -0.26
HSPG2-207ENST00000453796 CNRIP1Q96F85 164 aaPredicted RBP13.45□□□□□ -0.26
HSPG2-207ENST00000453796 APOPT1Q96IL0 206 aa13.45□□□□□ -0.26
HSPG2-207ENST00000453796 ZNF681Q96N22 645 aa13.45□□□□□ -0.26
HSPG2-207ENST00000453796 ROPN1BQ9BZX4 212 aaPredicted RBP13.45□□□□□ -0.26
HSPG2-207ENST00000453796 ROPN1Q9HAT0 212 aaPredicted RBP13.45□□□□□ -0.26
HSPG2-207ENST00000453796 ZNF639Q9UID6 485 aa13.45□□□□□ -0.26
HSPG2-207ENST00000453796 PLLPQ9Y342 182 aa13.45□□□□□ -0.26
HSPG2-207ENST00000453796 CCDC151A5D8V7 595 aa13.44□□□□□ -0.26
HSPG2-207ENST00000453796 GOLGA6L10A6NI86 522 aa13.44□□□□□ -0.26
HSPG2-207ENST00000453796 TFECO14948 347 aaPredicted RBP13.44□□□□□ -0.26
HSPG2-207ENST00000453796 ZNHIT1O43257 154 aa13.44□□□□□ -0.26
HSPG2-207ENST00000453796 HS6ST1O60243 411 aa13.44□□□□□ -0.26
HSPG2-207ENST00000453796 PCDH7O60245 1069 aa13.44□□□□□ -0.26
HSPG2-207ENST00000453796 GLSO94925 669 aaPredicted RBP13.44□□□□□ -0.26
HSPG2-207ENST00000453796 FBXO45P0C2W1 286 aa13.44□□□□□ -0.26
HSPG2-207ENST00000453796 TIA1P31483 386 aaKnown RBP eCLIP13.44□□□□□ -0.26
HSPG2-207ENST00000453796 ACSM2AQ08AH3 577 aa13.44□□□□□ -0.26
HSPG2-207ENST00000453796 FOXO1Q12778 655 aa13.44□□□□□ -0.26
HSPG2-207ENST00000453796 MAP4K2Q12851 820 aa13.44□□□□□ -0.26
HSPG2-207ENST00000453796 ERCC6LQ2NKX8 1250 aa13.44□□□□□ -0.26
HSPG2-207ENST00000453796 ACSM2BQ68CK6 577 aa13.44□□□□□ -0.26
HSPG2-207ENST00000453796 TRIM46Q7Z4K8 759 aa13.44□□□□□ -0.26
HSPG2-207ENST00000453796 C10orf107Q8IVU9 208 aa13.44□□□□□ -0.26
HSPG2-207ENST00000453796 MREGQ8N565 214 aa13.44□□□□□ -0.26
HSPG2-207ENST00000453796 CCDC63Q8NA47 563 aa13.44□□□□□ -0.26
HSPG2-207ENST00000453796 OR52N2Q8NGI0 321 aa13.44□□□□□ -0.26
HSPG2-207ENST00000453796 PAQR8Q8TEZ7 354 aa13.44□□□□□ -0.26
HSPG2-207ENST00000453796 C16orf78Q8WTQ4 265 aa13.44□□□□□ -0.26
HSPG2-207ENST00000453796 ADIPOR1Q96A54 375 aa13.44□□□□□ -0.26
HSPG2-207ENST00000453796 TP53INP1Q96A56 240 aa13.44□□□□□ -0.26
HSPG2-207ENST00000453796 CTHRC1Q96CG8 243 aa13.44□□□□□ -0.26
HSPG2-207ENST00000453796 SPACA9Q96E40 222 aaPredicted RBP13.44□□□□□ -0.26
HSPG2-207ENST00000453796 CCDC120Q96HB5 630 aa13.44□□□□□ -0.26
HSPG2-207ENST00000453796 GAL3ST4Q96RP7 486 aa13.44□□□□□ -0.26
HSPG2-207ENST00000453796 FAIM2Q9BWQ8 316 aa13.44□□□□□ -0.26
HSPG2-207ENST00000453796 OR10A5Q9H207 317 aa13.44□□□□□ -0.26
HSPG2-207ENST00000453796 MAT2BQ9NZL9 334 aa13.44□□□□□ -0.26
HSPG2-207ENST00000453796 MID2Q9UJV3 735 aa13.44□□□□□ -0.26
HSPG2-207ENST00000453796 TINAGQ9UJW2 476 aa13.44□□□□□ -0.26
HSPG2-207ENST00000453796 DLGAP4Q9Y2H0 992 aa13.44□□□□□ -0.26
HSPG2-207ENST00000453796 CCL27Q9Y4X3 112 aa13.44□□□□□ -0.26
HSPG2-207ENST00000453796 ESPNB1AK53 854 aa13.43□□□□□ -0.26
HSPG2-207ENST00000453796 CCL21O00585 134 aa13.43□□□□□ -0.26
HSPG2-207ENST00000453796 ERAL1O75616 437 aaKnown RBP13.43□□□□□ -0.26
HSPG2-207ENST00000453796 IL3P08700 152 aa13.43□□□□□ -0.26
HSPG2-207ENST00000453796 DRD2P14416 443 aa13.43□□□□□ -0.26
HSPG2-207ENST00000453796 CSNK2A2P19784 350 aaPredicted RBP13.43□□□□□ -0.26
HSPG2-207ENST00000453796 NT5EP21589 574 aa13.43□□□□□ -0.26
HSPG2-207ENST00000453796 SERPINB3P29508 390 aa13.43□□□□□ -0.26
HSPG2-207ENST00000453796 FEN1P39748 380 aaKnown RBP13.43□□□□□ -0.26
HSPG2-207ENST00000453796 NR0B1P51843 470 aaKnown RBP13.43□□□□□ -0.26
HSPG2-207ENST00000453796 DUSP8Q13202 625 aa13.43□□□□□ -0.26
HSPG2-207ENST00000453796 NTRK2Q16620 822 aa13.43□□□□□ -0.26
HSPG2-207ENST00000453796 CFAP157Q5JU67 520 aa13.43□□□□□ -0.26
HSPG2-207ENST00000453796 FAM180BQ6P0A1 224 aa13.43□□□□□ -0.26
HSPG2-207ENST00000453796 FAM111BQ6SJ93 734 aa13.43□□□□□ -0.26
HSPG2-207ENST00000453796 SRRM1Q8IYB3 904 aaKnown RBP13.43□□□□□ -0.26
HSPG2-207ENST00000453796 DND1Q8IYX4 353 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms