RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 PPM1MQ96MI6 270 aa15.01□□□□□ -0.01
SNX17-204ENST00000453453 QRFPRQ96P65 431 aa15.01□□□□□ -0.01
SNX17-204ENST00000453453 ZBTB18Q99592 522 aa15.01□□□□□ -0.01
SNX17-204ENST00000453453 MAP3K3Q99759 626 aa15.01□□□□□ -0.01
SNX17-204ENST00000453453 NLNQ9BYT8 704 aa15.01□□□□□ -0.01
SNX17-204ENST00000453453 SOHLH2Q9NX45 425 aa15.01□□□□□ -0.01
SNX17-204ENST00000453453 A0A0C4DFX4 3053 aa15.01□□□□□ -0.01
SNX17-204ENST00000453453 LY6G6EA0A0G2JKS1 128 aa15□□□□□ -0.01
SNX17-204ENST00000453453 SLC9B1P1A6NJY1 282 aa15□□□□□ -0.01
SNX17-204ENST00000453453 CLDN24A6NM45 220 aa15□□□□□ -0.01
SNX17-204ENST00000453453 C9JVG2 144 aa15□□□□□ -0.01
SNX17-204ENST00000453453 RGS13O14921 159 aa15□□□□□ -0.01
SNX17-204ENST00000453453 GSTA4O15217 222 aa15□□□□□ -0.01
SNX17-204ENST00000453453 LRP3O75074 770 aa15□□□□□ -0.01
SNX17-204ENST00000453453 BCKDHAP12694 445 aa15□□□□□ -0.01
SNX17-204ENST00000453453 CD1CP29017 333 aa15□□□□□ -0.01
SNX17-204ENST00000453453 ARL4DP49703 201 aa15□□□□□ -0.01
SNX17-204ENST00000453453 GFERP55789 205 aa15□□□□□ -0.01
SNX17-204ENST00000453453 CSNK2BP67870 215 aa15□□□□□ -0.01
SNX17-204ENST00000453453 SLC14A1Q13336 389 aa15□□□□□ -0.01
SNX17-204ENST00000453453 KIAA0040Q15053 153 aa15□□□□□ -0.01
SNX17-204ENST00000453453 SF3A2Q15428 464 aaKnown RBP15□□□□□ -0.01
SNX17-204ENST00000453453 PROX2Q3B8N5 592 aa15□□□□□ -0.01
SNX17-204ENST00000453453 PERM1Q5SV97 790 aa15□□□□□ -0.01
SNX17-204ENST00000453453 NOXRED1Q6NXP6 359 aa15□□□□□ -0.01
SNX17-204ENST00000453453 METTL4Q8N3J2 472 aa15□□□□□ -0.01
SNX17-204ENST00000453453 CAMKVQ8NCB2 501 aa15□□□□□ -0.01
SNX17-204ENST00000453453 SRFBP1Q8NEF9 429 aaKnown RBP15□□□□□ -0.01
SNX17-204ENST00000453453 OR2T12Q8NG77 320 aa15□□□□□ -0.01
SNX17-204ENST00000453453 RHOXF1Q8NHV9 184 aa15□□□□□ -0.01
SNX17-204ENST00000453453 CREB3L4Q8TEY5 395 aa15□□□□□ -0.01
SNX17-204ENST00000453453 SLC13A3Q8WWT9 602 aa15□□□□□ -0.01
SNX17-204ENST00000453453 FCGR1BQ92637 280 aa15□□□□□ -0.01
SNX17-204ENST00000453453 ZNF583Q96ND8 569 aa15□□□□□ -0.01
SNX17-204ENST00000453453 DPYSL5Q9BPU6 564 aa15□□□□□ -0.01
SNX17-204ENST00000453453 CCDC3Q9BQI4 270 aa15□□□□□ -0.01
SNX17-204ENST00000453453 DGCR6LQ9BY27 220 aa15□□□□□ -0.01
SNX17-204ENST00000453453 ASPSCR1Q9BZE9 553 aa15□□□□□ -0.01
SNX17-204ENST00000453453 KCNH6Q9H252 994 aa15□□□□□ -0.01
SNX17-204ENST00000453453 SIRT5Q9NXA8 310 aa15□□□□□ -0.01
SNX17-204ENST00000453453 SCN3BQ9NY72 215 aa15□□□□□ -0.01
SNX17-204ENST00000453453 PILRAQ9UKJ1 303 aa15□□□□□ -0.01
SNX17-204ENST00000453453 U3KQA8 63 aa15□□□□□ -0.01
SNX17-204ENST00000453453 GNG14A0A1W2PPG7 69 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 URADA6NGE7 173 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 FAM220BPB1ANY3 271 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 SAP18O00422 153 aaKnown RBP14.99□□□□□ -0.01
SNX17-204ENST00000453453 BCKDKO14874 412 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 PCDH7O60245 1069 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 CTSVO60911 334 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 INMTO95050 263 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 LDOC1O95751 146 aaPredicted RBP14.99□□□□□ -0.01
SNX17-204ENST00000453453 MT-ND1P03886 318 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 G6PDP11413 515 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 HOXB3P14651 431 aaPredicted RBP14.99□□□□□ -0.01
SNX17-204ENST00000453453 TIA1P31483 386 aaKnown RBP eCLIP14.99□□□□□ -0.014e-14■■■■■ 39.7
SNX17-204ENST00000453453 MLLT3P42568 568 aaPredicted RBP14.99□□□□□ -0.01
SNX17-204ENST00000453453 ST13P50502 369 aaKnown RBP14.99□□□□□ -0.01
SNX17-204ENST00000453453 EMX1Q04741 257 aaPredicted RBP14.99□□□□□ -0.01
SNX17-204ENST00000453453 SPEM2Q0P670 501 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 CDK5R2Q13319 367 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 ZIC1Q15915 447 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 FBXO42Q6P3S6 717 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 SLC2A7Q6PXP3 512 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 IFI44Q8TCB0 444 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 NT5CQ8TCD5 201 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 RHBDD1Q8TEB9 315 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 IPCEF1Q8WWN9 437 aaPredicted RBP14.99□□□□□ -0.01
SNX17-204ENST00000453453 FCRL1Q96LA6 429 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 F2RL3Q96RI0 385 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 EDEM2Q9BV94 578 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 DPY30Q9C005 99 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 REXO4Q9GZR2 422 aaKnown RBP14.99□□□□□ -0.01
SNX17-204ENST00000453453 MMP27Q9H306 513 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 TMEM9BQ9NQ34 198 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 FTSJ1Q9UET6 329 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 MAPRE3Q9UPY8 281 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 CACNA1HO95180 2353 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 COL5A1P20908 1838 aaPredicted RBP14.99□□□□□ -0.01
SNX17-204ENST00000453453 LRIT2A6NDA9 550 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 FAM47E-STBD1D6RA91 191 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 ANGPTL1O95841 491 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 PTTG1O95997 202 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 C9P02748 559 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 ANXA4P09525 319 aaPredicted RBP14.99□□□□□ -0.01
SNX17-204ENST00000453453 DCTP40126 519 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 ASMTP46597 345 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 ARFIP1P53367 373 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 SLC35A2P78381 396 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 IFITM3Q01628 133 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 SELENBP1Q13228 472 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 SQSTM1Q13501 440 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 CLPPQ16740 277 aaPredicted RBP14.99□□□□□ -0.01
SNX17-204ENST00000453453 TOR1AIP1Q5JTV8 583 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 TRIM40Q6P9F5 258 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 USP53Q70EK8 1073 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 PIWIL3Q7Z3Z3 882 aaKnown RBP14.99□□□□□ -0.01
SNX17-204ENST00000453453 COMMD6Q7Z4G1 85 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 NUDT13Q86X67 352 aa14.99□□□□□ -0.01
SNX17-204ENST00000453453 OR2A5Q96R48 311 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms