RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 GAL3ST4Q96RP7 486 aa11.5□□□□□ -0.57
CPSF4-208ENST00000452047 TP63Q9H3D4 680 aaPredicted RBP11.5□□□□□ -0.57
CPSF4-208ENST00000452047 BRF2Q9HAW0 419 aa11.5□□□□□ -0.57
CPSF4-208ENST00000452047 PROK2Q9HC23 129 aa11.5□□□□□ -0.57
CPSF4-208ENST00000452047 RYDENQ9NUL5 291 aaKnown RBP11.5□□□□□ -0.57
CPSF4-208ENST00000452047 TUBA8Q9NY65 449 aaPredicted RBP11.5□□□□□ -0.57
CPSF4-208ENST00000452047 AHSPQ9NZD4 102 aa11.5□□□□□ -0.57
CPSF4-208ENST00000452047 FETUBQ9UGM5 382 aa11.5□□□□□ -0.57
CPSF4-208ENST00000452047 TRPS1Q9UHF7 1281 aa11.5□□□□□ -0.57
CPSF4-208ENST00000452047 CES1P1Q9UKY3 287 aa11.5□□□□□ -0.57
CPSF4-208ENST00000452047 SLC12A4Q9UP95 1085 aa11.5□□□□□ -0.57
CPSF4-208ENST00000452047 CHCHD2Q9Y6H1 151 aaPredicted RBP11.5□□□□□ -0.57
CPSF4-208ENST00000452047 NINQ8N4C6 2090 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 A0A1B0GVC2 190 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 OR14I1A6ND48 311 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 DLX3O60479 287 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 OR4F21O95013 312 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 CELA3AP09093 270 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 RHOXF2BP0C7M4 288 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 PIK3R1P27986 724 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 TNFRSF8P28908 595 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 MAPK12P53778 367 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 CLCQ05315 142 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 NTRK2Q16620 822 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 UNC50Q53HI1 259 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 TCHHL1Q5QJ38 904 aaPredicted RBP11.49□□□□□ -0.57
CPSF4-208ENST00000452047 ZNF678Q5SXM1 525 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 CCNYL2Q5T2Q4 361 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 SLC22A10Q63ZE4 541 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 PAOXQ6QHF9 649 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 TRILQ7L0X0 811 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 GALNT12Q8IXK2 581 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 MMP21Q8N119 569 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 FBXW8Q8N3Y1 598 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 ZNF615Q8N8J6 731 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 ACBD4Q8NC06 268 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 OR10G3Q8NGC4 313 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 OR4K14Q8NGD5 310 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 MZB1Q8WU39 189 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 SELENOMQ8WWX9 145 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 SDCCAG3Q96C92 435 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 ZNF382Q96SR6 550 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 HBEGFQ99075 208 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 RHOXF2Q9BQY4 288 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 TRIM8Q9BZR9 551 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 RUBCNLQ9H714 662 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 ZNF703Q9H7S9 590 aaPredicted RBP11.49□□□□□ -0.57
CPSF4-208ENST00000452047 SNX6Q9UNH7 406 aa11.49□□□□□ -0.57
CPSF4-208ENST00000452047 HCFC1P51610 2035 aa11.48□□□□□ -0.57
CPSF4-208ENST00000452047 LRRC3CA6NJW4 275 aa11.48□□□□□ -0.57
CPSF4-208ENST00000452047 NPIPA2E9PIF3 369 aa11.48□□□□□ -0.57
CPSF4-208ENST00000452047 NPIPA3F8WFD2 350 aa11.48□□□□□ -0.57
CPSF4-208ENST00000452047 SUPT7LO94864 414 aa11.48□□□□□ -0.57
CPSF4-208ENST00000452047 SNRPB2P08579 225 aaKnown RBP11.48□□□□□ -0.57
CPSF4-208ENST00000452047 CPMP14384 443 aa11.48□□□□□ -0.57
CPSF4-208ENST00000452047 COX6B1P14854 86 aa11.48□□□□□ -0.57
CPSF4-208ENST00000452047 S1PR1P21453 382 aa11.48□□□□□ -0.57
CPSF4-208ENST00000452047 KIR3DL1P43629 444 aa11.48□□□□□ -0.57
CPSF4-208ENST00000452047 XKP51811 444 aa11.48□□□□□ -0.57
CPSF4-208ENST00000452047 SLC29A2Q14542 456 aa11.48□□□□□ -0.57
CPSF4-208ENST00000452047 RASA2Q15283 850 aa11.48□□□□□ -0.57
CPSF4-208ENST00000452047 TEX35Q5T0J7 233 aa11.48□□□□□ -0.57
CPSF4-208ENST00000452047 PRAMEF20Q5VT98 475 aa11.48□□□□□ -0.57
CPSF4-208ENST00000452047 SLC48A1Q6P1K1 146 aa11.48□□□□□ -0.57
CPSF4-208ENST00000452047 GDF7Q7Z4P5 450 aa11.48□□□□□ -0.57
CPSF4-208ENST00000452047 SRRM1Q8IYB3 904 aaKnown RBP11.48□□□□□ -0.57
CPSF4-208ENST00000452047 CDYL2Q8N8U2 506 aa11.48□□□□□ -0.57
CPSF4-208ENST00000452047 LRRN4CLQ8ND94 238 aa11.48□□□□□ -0.57
CPSF4-208ENST00000452047 ACMSDQ8TDX5 336 aa11.48□□□□□ -0.57
CPSF4-208ENST00000452047 ADIPOR1Q96A54 375 aa11.48□□□□□ -0.57
CPSF4-208ENST00000452047 TP53INP1Q96A56 240 aa11.48□□□□□ -0.57
CPSF4-208ENST00000452047 SMC6Q96SB8 1091 aa11.48□□□□□ -0.57
CPSF4-208ENST00000452047 PNPLA3Q9NST1 481 aa11.48□□□□□ -0.57
CPSF4-208ENST00000452047 CNIH4Q9P003 139 aa11.48□□□□□ -0.57
CPSF4-208ENST00000452047 PSMC3IPQ9P2W1 217 aaPredicted RBP11.48□□□□□ -0.57
CPSF4-208ENST00000452047 CNOT11Q9UKZ1 510 aaKnown RBP11.48□□□□□ -0.57
CPSF4-208ENST00000452047 PCDHA9Q9Y5H5 950 aa11.48□□□□□ -0.57
CPSF4-208ENST00000452047 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.48□□□□□ -0.57
CPSF4-208ENST00000452047 AKAP9Q99996 3911 aa11.48□□□□□ -0.57
CPSF4-208ENST00000452047 POLQO75417 2590 aa11.48□□□□□ -0.57
CPSF4-208ENST00000452047 FREM3P0C091 2139 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 C2orf92A0A1B0GVN3 265 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 ATP6AP2A0A1C7CYW4 349 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 C1orf226A1L170 272 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 GOLGA8RI6L899 631 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 MANBAO00462 879 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 AQP7O14520 342 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 SUSD5O60279 629 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 GUCY1B2O75343 617 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 ATP6AP2O75787 350 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 ATP1B1P05026 303 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 RFPL3SP0C7P2 107 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 HSD3B1P14060 373 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 PORP16435 677 aaPredicted RBP11.47□□□□□ -0.57
CPSF4-208ENST00000452047 TAC1P20366 129 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 IMPDH1P20839 514 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 ENDOUP21128 410 aaKnown RBP11.47□□□□□ -0.57
CPSF4-208ENST00000452047 ATP5F1P24539 256 aaPredicted RBP11.47□□□□□ -0.57
CPSF4-208ENST00000452047 HSD3B2P26439 372 aa11.47□□□□□ -0.57
CPSF4-208ENST00000452047 SERPINB3P29508 390 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms