RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 CHRNGP07510 517 aa20.1■□□□□ 0.81
C9orf3-208ENST00000451893 KITP10721 976 aa20.1■□□□□ 0.81
C9orf3-208ENST00000451893 EPORP19235 508 aa20.1■□□□□ 0.81
C9orf3-208ENST00000451893 HTR1EP28566 365 aa20.1■□□□□ 0.81
C9orf3-208ENST00000451893 BUD31P41223 144 aaPredicted RBP20.1■□□□□ 0.81
C9orf3-208ENST00000451893 PKNOX1P55347 436 aa20.1■□□□□ 0.81
C9orf3-208ENST00000451893 ID2Q02363 134 aa20.1■□□□□ 0.81
C9orf3-208ENST00000451893 SLAMF1Q13291 335 aa20.1■□□□□ 0.81
C9orf3-208ENST00000451893 SPDYAQ5MJ70 313 aa20.1■□□□□ 0.81
C9orf3-208ENST00000451893 OR4C11Q6IEV9 310 aa20.1■□□□□ 0.81
C9orf3-208ENST00000451893 ZNF793Q6ZN11 406 aa20.1■□□□□ 0.81
C9orf3-208ENST00000451893 BNC2Q6ZN30 1099 aaPredicted RBP20.1■□□□□ 0.81
C9orf3-208ENST00000451893 TRPM8Q7Z2W7 1104 aa20.1■□□□□ 0.81
C9orf3-208ENST00000451893 CLYBLQ8N0X4 340 aa20.1■□□□□ 0.81
C9orf3-208ENST00000451893 HUS1BQ8NHY5 278 aa20.1■□□□□ 0.81
C9orf3-208ENST00000451893 MTERF1Q99551 399 aaKnown RBP20.1■□□□□ 0.81
C9orf3-208ENST00000451893 PFDN4Q9NQP4 134 aa20.1■□□□□ 0.81
C9orf3-208ENST00000451893 ZDHHC2Q9UIJ5 367 aa20.1■□□□□ 0.81
C9orf3-208ENST00000451893 PCTPQ9UKL6 214 aa20.1■□□□□ 0.81
C9orf3-208ENST00000451893 UNC79Q9P2D8 2635 aa20.09■□□□□ 0.81
C9orf3-208ENST00000451893 TPOP07202 933 aa20.09■□□□□ 0.81
C9orf3-208ENST00000451893 GTF2H2Q13888 395 aa20.09■□□□□ 0.81
C9orf3-208ENST00000451893 METTL21CQ5VZV1 264 aa20.09■□□□□ 0.81
C9orf3-208ENST00000451893 LIPJQ5W064 366 aa20.09■□□□□ 0.81
C9orf3-208ENST00000451893 GTF2H2CQ6P1K8 395 aa20.09■□□□□ 0.81
C9orf3-208ENST00000451893 PAOXQ6QHF9 649 aa20.09■□□□□ 0.81
C9orf3-208ENST00000451893 CYP20A1Q6UW02 462 aa20.09■□□□□ 0.81
C9orf3-208ENST00000451893 PSD4Q8NDX1 1056 aa20.09■□□□□ 0.81
C9orf3-208ENST00000451893 AGAP11Q8TF27 550 aa20.09■□□□□ 0.81
C9orf3-208ENST00000451893 RBM18Q96H35 190 aaKnown RBP20.09■□□□□ 0.81
C9orf3-208ENST00000451893 LRRC37BQ96QE4 947 aa20.09■□□□□ 0.81
C9orf3-208ENST00000451893 WDR41Q9HAD4 459 aa20.09■□□□□ 0.81
C9orf3-208ENST00000451893 MYOTQ9UBF9 498 aa20.09■□□□□ 0.81
C9orf3-208ENST00000451893 MARCOQ9UEW3 520 aaPredicted RBP20.09■□□□□ 0.81
C9orf3-208ENST00000451893 ZNF223Q9UK11 482 aaPredicted RBP20.09■□□□□ 0.81
C9orf3-208ENST00000451893 PPIEQ9UNP9 301 aaKnown RBP20.09■□□□□ 0.81
C9orf3-208ENST00000451893 ZNF195O14628 629 aa20.08■□□□□ 0.81
C9orf3-208ENST00000451893 HS6ST1O60243 411 aa20.08■□□□□ 0.81
C9orf3-208ENST00000451893 CCDC22O60826 627 aa20.08■□□□□ 0.81
C9orf3-208ENST00000451893 WISP2O76076 250 aa20.08■□□□□ 0.81
C9orf3-208ENST00000451893 SIX3O95343 332 aaPredicted RBP20.08■□□□□ 0.81
C9orf3-208ENST00000451893 SNRPB2P08579 225 aaKnown RBP20.08■□□□□ 0.81
C9orf3-208ENST00000451893 COX6B1P14854 86 aa20.08■□□□□ 0.81
C9orf3-208ENST00000451893 PTGER1P34995 402 aa20.08■□□□□ 0.81
C9orf3-208ENST00000451893 PTGS2P35354 604 aa20.08■□□□□ 0.81
C9orf3-208ENST00000451893 PIK3CBP42338 1070 aa20.08■□□□□ 0.81
C9orf3-208ENST00000451893 GPR143P51810 404 aa20.08■□□□□ 0.81
C9orf3-208ENST00000451893 PLIN5Q00G26 463 aa20.08■□□□□ 0.81
C9orf3-208ENST00000451893 IFT88Q13099 833 aa20.08■□□□□ 0.81
C9orf3-208ENST00000451893 CPSF6Q16630 551 aaKnown RBP eCLIP20.08■□□□□ 0.81
C9orf3-208ENST00000451893 SH2D4BQ5SQS7 431 aa20.08■□□□□ 0.81
C9orf3-208ENST00000451893 DEPDC1Q5TB30 811 aa20.08■□□□□ 0.81
C9orf3-208ENST00000451893 EPGNQ6UW88 154 aa20.08■□□□□ 0.81
C9orf3-208ENST00000451893 C16orf47Q6ZP98 133 aaPredicted RBP20.08■□□□□ 0.81
C9orf3-208ENST00000451893 Q6ZPB1 254 aaPredicted RBP20.08■□□□□ 0.81
C9orf3-208ENST00000451893 SIAH3Q8IW03 269 aa20.08■□□□□ 0.81
C9orf3-208ENST00000451893 ARMC10Q8N2F6 343 aa20.08■□□□□ 0.81
C9orf3-208ENST00000451893 SLC2A12Q8TD20 617 aa20.08■□□□□ 0.81
C9orf3-208ENST00000451893 THOC1Q96FV9 657 aaKnown RBP20.08■□□□□ 0.81
C9orf3-208ENST00000451893 ART5Q96L15 291 aa20.08■□□□□ 0.81
C9orf3-208ENST00000451893 ZNF382Q96SR6 550 aa20.08■□□□□ 0.81
C9orf3-208ENST00000451893 CCT7Q99832 543 aa20.08■□□□□ 0.81
C9orf3-208ENST00000451893 RPF2Q9H7B2 306 aaKnown RBP20.08■□□□□ 0.81
C9orf3-208ENST00000451893 IPPKQ9H8X2 491 aa20.08■□□□□ 0.81
C9orf3-208ENST00000451893 DMRT3Q9NQL9 472 aa20.08■□□□□ 0.81
C9orf3-208ENST00000451893 ZNF835Q9Y2P0 537 aa20.08■□□□□ 0.81
C9orf3-208ENST00000451893 MEMO1Q9Y316 297 aa20.08■□□□□ 0.81
C9orf3-208ENST00000451893 TRAF6Q9Y4K3 522 aa20.08■□□□□ 0.81
C9orf3-208ENST00000451893 PCNX1Q96RV3 2341 aa20.07■□□□□ 0.8
C9orf3-208ENST00000451893 ENO4A6NNW6 628 aa20.07■□□□□ 0.8
C9orf3-208ENST00000451893 PRKNO60260 465 aaPredicted RBP20.07■□□□□ 0.8
C9orf3-208ENST00000451893 OR10H2O60403 315 aa20.07■□□□□ 0.8
C9orf3-208ENST00000451893 PTX3P26022 381 aaPredicted RBP20.07■□□□□ 0.8
C9orf3-208ENST00000451893 SOX3P41225 446 aa20.07■□□□□ 0.8
C9orf3-208ENST00000451893 RPS13P62277 151 aaKnown RBP20.07■□□□□ 0.8
C9orf3-208ENST00000451893 CCDC121Q6ZUS5 278 aa20.07■□□□□ 0.8
C9orf3-208ENST00000451893 MDGA2Q7Z553 956 aa20.07■□□□□ 0.8
C9orf3-208ENST00000451893 UBE3DQ7Z6J8 389 aa20.07■□□□□ 0.8
C9orf3-208ENST00000451893 GPR180Q86V85 440 aa20.07■□□□□ 0.8
C9orf3-208ENST00000451893 ZNF227Q86WZ6 799 aa20.07■□□□□ 0.8
C9orf3-208ENST00000451893 OR4N5Q8IXE1 308 aa20.07■□□□□ 0.8
C9orf3-208ENST00000451893 RNF175Q8N4F7 328 aa20.07■□□□□ 0.8
C9orf3-208ENST00000451893 PTPMT1Q8WUK0 201 aaPredicted RBP20.07■□□□□ 0.8
C9orf3-208ENST00000451893 RASL10BQ96S79 203 aa20.07■□□□□ 0.8
C9orf3-208ENST00000451893 CCDC28BQ9BUN5 200 aa20.07■□□□□ 0.8
C9orf3-208ENST00000451893 SORBS1Q9BX66 1292 aaKnown RBP20.07■□□□□ 0.8
C9orf3-208ENST00000451893 MRGBPQ9NV56 204 aa20.07■□□□□ 0.8
C9orf3-208ENST00000451893 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.07■□□□□ 0.8
C9orf3-208ENST00000451893 COQ3Q9NZJ6 369 aa20.07■□□□□ 0.8
C9orf3-208ENST00000451893 HEY2Q9UBP5 337 aa20.07■□□□□ 0.8
C9orf3-208ENST00000451893 PPT2Q9UMR5 302 aa20.07■□□□□ 0.8
C9orf3-208ENST00000451893 A0A1B0GTH9 108 aa20.06■□□□□ 0.8
C9orf3-208ENST00000451893 ERICH4A6NGS2 130 aa20.06■□□□□ 0.8
C9orf3-208ENST00000451893 ZNHIT1O43257 154 aa20.06■□□□□ 0.8
C9orf3-208ENST00000451893 UGDHO60701 494 aa20.06■□□□□ 0.8
C9orf3-208ENST00000451893 PDE9AO76083 593 aa20.06■□□□□ 0.8
C9orf3-208ENST00000451893 ESRRBO95718 433 aa20.06■□□□□ 0.8
C9orf3-208ENST00000451893 OTCP00480 354 aa20.06■□□□□ 0.8
C9orf3-208ENST00000451893 IDH3AP50213 366 aa20.06■□□□□ 0.8
C9orf3-208ENST00000451893 CCNG1P51959 295 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms