RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 PSME2Q9UL46 239 aa12.17□□□□□ -0.46
VPS33A-202ENST00000451053 KCNMB2Q9Y691 235 aa12.17□□□□□ -0.46
VPS33A-202ENST00000451053 ZNF780BQ9Y6R6 833 aa12.17□□□□□ -0.46
VPS33A-202ENST00000451053 SYNDIG1LA6NDD5 238 aa12.16□□□□□ -0.46
VPS33A-202ENST00000451053 ERICH4A6NGS2 130 aa12.16□□□□□ -0.46
VPS33A-202ENST00000451053 CCDC154A6NI56 674 aa12.16□□□□□ -0.46
VPS33A-202ENST00000451053 MYO1GB0I1T2 1018 aa12.16□□□□□ -0.46
VPS33A-202ENST00000451053 C17orf105B2RV13 164 aa12.16□□□□□ -0.46
VPS33A-202ENST00000451053 DNAJB5O75953 348 aa12.16□□□□□ -0.46
VPS33A-202ENST00000451053 UNC5CO95185 931 aa12.16□□□□□ -0.46
VPS33A-202ENST00000451053 CBX6O95503 412 aa12.16□□□□□ -0.46
VPS33A-202ENST00000451053 COX7A2P14406 83 aa12.16□□□□□ -0.46
VPS33A-202ENST00000451053 TNNI3P19429 210 aa12.16□□□□□ -0.46
VPS33A-202ENST00000451053 CSNK2A2P19784 350 aaPredicted RBP12.16□□□□□ -0.46
VPS33A-202ENST00000451053 SLC26A5P58743 744 aa12.16□□□□□ -0.46
VPS33A-202ENST00000451053 BIKQ13323 160 aa12.16□□□□□ -0.46
VPS33A-202ENST00000451053 LTB4RQ15722 352 aa12.16□□□□□ -0.46
VPS33A-202ENST00000451053 CEBPEQ15744 281 aa12.16□□□□□ -0.46
VPS33A-202ENST00000451053 MMEL1Q495T6 779 aa12.16□□□□□ -0.46
VPS33A-202ENST00000451053 LACTB2Q53H82 288 aaPredicted RBP12.16□□□□□ -0.46
VPS33A-202ENST00000451053 GK5Q6ZS86 529 aa12.16□□□□□ -0.46
VPS33A-202ENST00000451053 MSANTD1Q6ZTZ1 278 aa12.16□□□□□ -0.46
VPS33A-202ENST00000451053 FUNDC1Q8IVP5 155 aa12.16□□□□□ -0.46
VPS33A-202ENST00000451053 CCDC116Q8IYX3 515 aa12.16□□□□□ -0.46
VPS33A-202ENST00000451053 LRRC25Q8N386 305 aaPredicted RBP12.16□□□□□ -0.46
VPS33A-202ENST00000451053 TMEM102Q8N9M5 508 aaPredicted RBP12.16□□□□□ -0.46
VPS33A-202ENST00000451053 PCYOX1LQ8NBM8 494 aa12.16□□□□□ -0.46
VPS33A-202ENST00000451053 OR9I1Q8NGQ6 314 aa12.16□□□□□ -0.46
VPS33A-202ENST00000451053 SUN3Q8TAQ9 357 aa12.16□□□□□ -0.46
VPS33A-202ENST00000451053 CIDECQ96AQ7 238 aaPredicted RBP12.16□□□□□ -0.46
VPS33A-202ENST00000451053 RBM18Q96H35 190 aaKnown RBP12.16□□□□□ -0.46
VPS33A-202ENST00000451053 TEX37Q96LM6 180 aa12.16□□□□□ -0.46
VPS33A-202ENST00000451053 FER1L6-AS2Q96M78 137 aa12.16□□□□□ -0.46
VPS33A-202ENST00000451053 PELOQ9BRX2 385 aaKnown RBP12.16□□□□□ -0.46
VPS33A-202ENST00000451053 ING2Q9H160 280 aa12.16□□□□□ -0.46
VPS33A-202ENST00000451053 SLAMF7Q9NQ25 335 aa12.16□□□□□ -0.46
VPS33A-202ENST00000451053 GIMAP4Q9NUV9 329 aa12.16□□□□□ -0.46
VPS33A-202ENST00000451053 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.16□□□□□ -0.46
VPS33A-202ENST00000451053 NDE1Q9NXR1 346 aa12.16□□□□□ -0.46
VPS33A-202ENST00000451053 SH3BP4Q9P0V3 963 aa12.16□□□□□ -0.46
VPS33A-202ENST00000451053 ENTPD4Q9Y227 616 aa12.16□□□□□ -0.46
VPS33A-202ENST00000451053 NDUFAF1Q9Y375 327 aa12.16□□□□□ -0.46
VPS33A-202ENST00000451053 CROCCQ5TZA2 2017 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 LOC100653049A0A140TA62 436 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 A0A1W2PP18 115 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 C9JVG2 144 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 HRKO00198 91 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 PDPK1O15530 556 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 KRT34O76011 436 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 DDAH2O95865 285 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 ATP1B1P05026 303 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 CT62P0C5K7 136 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 LAMP1P11279 417 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 EFNA1P20827 205 aaPredicted RBP12.15□□□□□ -0.46
VPS33A-202ENST00000451053 NT5EP21589 574 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 IL12AP29459 219 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 S100A3P33764 101 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 KIR3DL1P43629 444 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 PGDP52209 483 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 RRADP55042 308 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 MXRA7P84157 204 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 LRRC74AQ0VAA2 488 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 TBR1Q16650 682 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 BTBD16Q32M84 506 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 FAM174BQ3ZCQ3 159 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 CPTPQ5TA50 214 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 PLAG1Q6DJT9 500 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 GPR155Q7Z3F1 870 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 CAMKMTQ7Z624 323 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 SAMD14Q8IZD0 417 aaPredicted RBP12.15□□□□□ -0.46
VPS33A-202ENST00000451053 KIF2BQ8N4N8 673 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 POU5F2Q8N7G0 328 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 ZNF321PQ8N8H1 164 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 CLEC1AQ8NC01 280 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 C7orf57Q8NEG2 295 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 VPS37AQ8NEZ2 397 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 B3GNT7Q8NFL0 401 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 ADCY4Q8NFM4 1077 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 OR9A2Q8NGT5 310 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 OR14A16Q8NHC5 309 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 EXTL1Q92935 676 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 RIT1Q92963 219 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 NCLNQ969V3 563 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 BBS4Q96RK4 519 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 OR8D2Q9GZM6 311 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 RMND5AQ9H871 391 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 EFCAB1Q9HAE3 211 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 CXorf21Q9HAI6 301 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 ATP13A2Q9NQ11 1180 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 LEF1Q9UJU2 399 aaPredicted RBP12.15□□□□□ -0.46
VPS33A-202ENST00000451053 CLCA3PQ9Y6N3 262 aa12.15□□□□□ -0.46
VPS33A-202ENST00000451053 ACACBO00763 2458 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 PGRP06401 933 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 ITGAMP11215 1152 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 ITGA3P26006 1051 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 NTSP30990 170 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 GALNSP34059 522 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 SOX18P35713 384 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 CCL11P51671 97 aa12.14□□□□□ -0.47
VPS33A-202ENST00000451053 GPR143P51810 404 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms