RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 ZFAND3Q9H8U3 227 aa9.31□□□□□ -0.92
LINC01004-202ENST00000450686 IGSF5Q9NSI5 407 aa9.31□□□□□ -0.92
LINC01004-202ENST00000450686 BOKQ9UMX3 212 aaPredicted RBP9.31□□□□□ -0.92
LINC01004-202ENST00000450686 CAMK2AQ9UQM7 478 aa9.31□□□□□ -0.92
LINC01004-202ENST00000450686 DTX4Q9Y2E6 619 aa9.31□□□□□ -0.92
LINC01004-202ENST00000450686 FN1P02751 2386 aaKnown RBP9.31□□□□□ -0.92
LINC01004-202ENST00000450686 ANK3Q12955 4377 aaKnown RBP9.31□□□□□ -0.92
LINC01004-202ENST00000450686 A0A1W2PR48 441 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 FAM159BA6NKW6 160 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 K7EPI3 171 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 GNB5O14775 395 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 PGRMC2O15173 223 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 AIFM1O95831 613 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 TCP1P17987 556 aaKnown RBP9.3□□□□□ -0.92
LINC01004-202ENST00000450686 CASP2P42575 452 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 DGKQP52824 942 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 SLC37A1P57057 533 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 RAB10P61026 200 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 ATP6V0D1P61421 351 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 ADAM8P78325 824 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 CRYZQ08257 329 aaKnown RBP9.3□□□□□ -0.92
LINC01004-202ENST00000450686 LAPTM5Q13571 262 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 TBCCQ15814 346 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 FLYWCH1Q4VC44 716 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 TMEM35AQ53FP2 167 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 UBAP2Q5T6F2 1119 aaKnown RBP9.3□□□□□ -0.92
LINC01004-202ENST00000450686 DEPDC1Q5TB30 811 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 FNDC7Q5VTL7 733 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 GRHL2Q6ISB3 625 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 SYDE1Q6ZW31 735 aaPredicted RBP9.3□□□□□ -0.92
LINC01004-202ENST00000450686 RAPH1Q70E73 1250 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 CHSY3Q70JA7 882 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 SLC29A4Q7RTT9 530 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 ISCA2Q86U28 154 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 CCDC25Q86WR0 208 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 MED12LQ86YW9 2145 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 PPM1NQ8N819 430 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 SIMC1Q8NDZ2 872 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 KCTD4Q8WVF5 259 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 ZNF592Q92610 1267 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 RIT1Q92963 219 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 NXNL1Q96CM4 212 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 CMTM7Q96FZ5 175 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 RBM18Q96H35 190 aaKnown RBP9.3□□□□□ -0.92
LINC01004-202ENST00000450686 UBXN10Q96LJ8 280 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 ZNF597Q96LX8 424 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 RILPQ96NA2 401 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 GNRHR2Q96P88 292 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 TIMP4Q99727 224 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 ROGDIQ9GZN7 287 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 DLL4Q9NR61 685 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 TEX10Q9NXF1 929 aaPredicted RBP9.3□□□□□ -0.92
LINC01004-202ENST00000450686 NUDT4Q9NZJ9 180 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 EHD3Q9NZN3 535 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 TXNDC16Q9P2K2 825 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 OPTCQ9UBM4 332 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 ASB4Q9Y574 426 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 SPACA6W5XKT8 324 aa9.3□□□□□ -0.92
LINC01004-202ENST00000450686 IQANK1A0A1B0GTG1 560 aa9.29□□□□□ -0.92
LINC01004-202ENST00000450686 A0A1W2PPR1 153 aa9.29□□□□□ -0.92
LINC01004-202ENST00000450686 EEF1E1-BLOC1S5C9J1V9 151 aa9.29□□□□□ -0.92
LINC01004-202ENST00000450686 SYT5O00445 386 aa9.29□□□□□ -0.92
LINC01004-202ENST00000450686 EEF1E1O43324 174 aaKnown RBP9.29□□□□□ -0.92
LINC01004-202ENST00000450686 TRIM3O75382 744 aaPredicted RBP9.29□□□□□ -0.92
LINC01004-202ENST00000450686 NME6O75414 186 aaPredicted RBP9.29□□□□□ -0.92
LINC01004-202ENST00000450686 SIX3O95343 332 aaPredicted RBP9.29□□□□□ -0.92
LINC01004-202ENST00000450686 NR2F6P10588 404 aa9.29□□□□□ -0.92
LINC01004-202ENST00000450686 MTHFD2P13995 350 aa9.29□□□□□ -0.92
LINC01004-202ENST00000450686 TCEA1P23193 301 aaKnown RBP9.29□□□□□ -0.92
LINC01004-202ENST00000450686 DNASE1P24855 282 aa9.29□□□□□ -0.92
LINC01004-202ENST00000450686 HPDP32754 393 aaPredicted RBP9.29□□□□□ -0.92
LINC01004-202ENST00000450686 BSGP35613 385 aa9.29□□□□□ -0.92
LINC01004-202ENST00000450686 GP5P40197 560 aa9.29□□□□□ -0.92
LINC01004-202ENST00000450686 ASCL1P50553 236 aa9.29□□□□□ -0.92
LINC01004-202ENST00000450686 GNG11P61952 73 aa9.29□□□□□ -0.92
LINC01004-202ENST00000450686 C2orf54Q08AI8 447 aa9.29□□□□□ -0.92
LINC01004-202ENST00000450686 FOXF2Q12947 444 aa9.29□□□□□ -0.92
LINC01004-202ENST00000450686 TOMM20Q15388 145 aa9.29□□□□□ -0.92
LINC01004-202ENST00000450686 NTRK2Q16620 822 aa9.29□□□□□ -0.92
LINC01004-202ENST00000450686 CPSF6Q16630 551 aaKnown RBP eCLIP9.29□□□□□ -0.921e-7■■■■■ 32.5
LINC01004-202ENST00000450686 KRTAP21-3Q3LHN1 58 aa9.29□□□□□ -0.92
LINC01004-202ENST00000450686 KBTBD12Q3ZCT8 623 aa9.29□□□□□ -0.92
LINC01004-202ENST00000450686 WIPI1Q5MNZ9 446 aaPredicted RBP9.29□□□□□ -0.92
LINC01004-202ENST00000450686 FBXW10Q5XX13 1052 aa9.29□□□□□ -0.92
LINC01004-202ENST00000450686 FAM180BQ6P0A1 224 aa9.29□□□□□ -0.92
LINC01004-202ENST00000450686 TRIM46Q7Z4K8 759 aa9.29□□□□□ -0.92
LINC01004-202ENST00000450686 YRDCQ86U90 279 aaKnown RBP9.29□□□□□ -0.92
LINC01004-202ENST00000450686 ST13P4Q8IZP2 240 aaPredicted RBP9.29□□□□□ -0.92
LINC01004-202ENST00000450686 CENPLQ8N0S6 344 aaPredicted RBP9.29□□□□□ -0.92
LINC01004-202ENST00000450686 ZNF441Q8N8Z8 693 aa9.29□□□□□ -0.92
LINC01004-202ENST00000450686 C9orf106Q8NAJ2 232 aa9.29□□□□□ -0.92
LINC01004-202ENST00000450686 MYRIPQ8NFW9 859 aa9.29□□□□□ -0.92
LINC01004-202ENST00000450686 GOT1L1Q8NHS2 421 aaPredicted RBP9.29□□□□□ -0.92
LINC01004-202ENST00000450686 UBTD2Q8WUN7 234 aa9.29□□□□□ -0.92
LINC01004-202ENST00000450686 RNASE6Q93091 150 aaKnown RBP9.29□□□□□ -0.92
LINC01004-202ENST00000450686 RGMAQ96B86 450 aa9.29□□□□□ -0.92
LINC01004-202ENST00000450686 TRIB1Q96RU8 372 aa9.29□□□□□ -0.92
LINC01004-202ENST00000450686 CPNE1Q99829 537 aa9.29□□□□□ -0.92
LINC01004-202ENST00000450686 NSMCE4AQ9NXX6 385 aa9.29□□□□□ -0.92
LINC01004-202ENST00000450686 GRHL1Q9NZI5 618 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms