RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 NME6O75414 186 aaPredicted RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 LRCH4O75427 683 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 NCR1O76036 304 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ATG12O94817 140 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 UBL3O95164 117 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 AGR2O95994 175 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 QDPRP09417 244 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 UNGP13051 313 aaPredicted RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 ZNF30P17039 623 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 PRPS1L1P21108 318 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ENPP1P22413 925 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 GABRR1P24046 479 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ARL3P36405 182 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ECI1P42126 302 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 TAF6P49848 677 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 CDH12P55289 794 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 TAS2R41P59536 307 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 STXBP1P61764 594 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 MRPS5P82675 430 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 CCINQ13939 588 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 SIX1Q15475 284 aaPredicted RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 AAK1Q2M2I8 961 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 RTP2Q5QGT7 225 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 CPTPQ5TA50 214 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 IER5Q5VY09 327 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 HBMQ6B0K9 141 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 SWSAP1Q6NVH7 229 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 RPTNQ6XPR3 784 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 USP17L1Q7RTZ2 530 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 PARGQ86W56 976 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ANGPTL5Q86XS5 388 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 DENND1CQ8IV53 801 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 TNS4Q8IZW8 715 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 HJURPQ8NCD3 748 aaPredicted RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 FAM71CQ8NEG0 241 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 PROKR2Q8NFJ6 384 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 OR4C5Q8NGB2 326 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 OR1J2Q8NGS2 313 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 OR2L2Q8NH16 312 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 C1orf216Q8TAB5 229 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 WDR48Q8TAF3 677 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 SLC16A10Q8TF71 515 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 SLC25A46Q96AG3 418 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 C14orf79Q96F83 325 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 CPNE2Q96FN4 548 aaPredicted RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 HSH2DQ96JZ2 352 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 KCNC2Q96PR1 638 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ZNF300Q96RE9 604 aaPredicted RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 SLC30A3Q99726 388 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 PIP5K1AQ99755 562 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 CCM2Q9BSQ5 444 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 FAIM2Q9BWQ8 316 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 SEC11CQ9BY50 192 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ACTRT3Q9BYD9 372 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 OR8D2Q9GZM6 311 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 MIXL1Q9H2W2 232 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ESRP2Q9H6T0 727 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 FAM212BQ9NTI7 297 aaPredicted RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 CHRNA9Q9UGM1 479 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 PSORS1C1Q9UIG5 152 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 KCNK7Q9Y2U2 307 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 GOLT1BQ9Y3E0 138 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 TNRC6CQ9HCJ0 1690 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 A0A087X0M5 115 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 A0A1B0GX30 115 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 A0A1W2PPQ1 181 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 RPS10-NUDT3A0A1W2PQS6 291 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 TCRBV7S2A1N4TA0A589 114 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 FAM166BA8MTA8 275 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ZNF705GA8MUZ8 300 aaPredicted RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 SMIM22K7EJ46 135 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 CYR61O00622 381 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 PHOX2AO14813 284 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 KHNYNO15037 678 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 AKR7A2O43488 359 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 BCL2L11O43521 198 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 PMS2P2O95744 297 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 SCGB1D1O95968 90 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 TP53P04637 393 aaPredicted RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 IL5P05113 134 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 INHBBP09529 407 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 LINC00614P0C842 121 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 CCR7P32248 378 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 RPS10P46783 165 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 OR1G1P47890 313 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 PREPP48147 710 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 SOX9P48436 509 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 MRPL19P49406 292 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 THBS3P49746 956 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 RPL23AP62750 156 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 TMEM115Q12893 351 aaPredicted RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 PPIGQ13427 754 aaKnown RBP eCLIP2.11□□□□□ -2.07
USP53-202ENST00000450251 PTPRRQ15256 657 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ADPRMQ3LIE5 342 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ZNF697Q5TEC3 545 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 LHX8Q68G74 356 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 RAET1GQ6H3X3 334 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 RTL6Q6ICC9 239 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 KIAA1211LQ6NV74 962 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 MPZL3Q6UWV2 235 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms