RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 ATP1B1P05026 303 aa13.4□□□□□ -0.27
USP39-207ENST00000450066 HMGN2P05204 90 aaKnown RBP13.4□□□□□ -0.27
USP39-207ENST00000450066 SYPP08247 313 aa13.4□□□□□ -0.27
USP39-207ENST00000450066 RNH1P13489 461 aaKnown RBP13.4□□□□□ -0.27
USP39-207ENST00000450066 UQCRBP14927 111 aa13.4□□□□□ -0.27
USP39-207ENST00000450066 AVPR2P30518 371 aa13.4□□□□□ -0.27
USP39-207ENST00000450066 KHKP50053 298 aa13.4□□□□□ -0.27
USP39-207ENST00000450066 PRKAG1P54619 331 aa13.4□□□□□ -0.27
USP39-207ENST00000450066 ANGPT1Q15389 498 aa13.4□□□□□ -0.27
USP39-207ENST00000450066 LTB4RQ15722 352 aa13.4□□□□□ -0.27
USP39-207ENST00000450066 NRF1Q16656 503 aa13.4□□□□□ -0.27
USP39-207ENST00000450066 SNAP47Q5SQN1 464 aa13.4□□□□□ -0.27
USP39-207ENST00000450066 VTCN1Q7Z7D3 282 aa13.4□□□□□ -0.27
USP39-207ENST00000450066 PATL1Q86TB9 770 aaKnown RBP13.4□□□□□ -0.27
USP39-207ENST00000450066 ZDHHC21Q8IVQ6 265 aa13.4□□□□□ -0.27
USP39-207ENST00000450066 SHISA5Q8N114 240 aa13.4□□□□□ -0.27
USP39-207ENST00000450066 CBR4Q8N4T8 237 aa13.4□□□□□ -0.27
USP39-207ENST00000450066 METTL25Q8N6Q8 603 aa13.4□□□□□ -0.27
USP39-207ENST00000450066 ADAMTS18Q8TE60 1221 aa13.4□□□□□ -0.27
USP39-207ENST00000450066 RAB8BQ92930 207 aa13.4□□□□□ -0.27
USP39-207ENST00000450066 COL26A1Q96A83 441 aa13.4□□□□□ -0.27
USP39-207ENST00000450066 NUDT22Q9BRQ3 303 aa13.4□□□□□ -0.27
USP39-207ENST00000450066 OR51I1Q9H343 314 aa13.4□□□□□ -0.27
USP39-207ENST00000450066 ASXL3Q9C0F0 2248 aa13.39□□□□□ -0.27
USP39-207ENST00000450066 TMEM247A6NEH6 219 aa13.39□□□□□ -0.27
USP39-207ENST00000450066 TMEM229AB2RXF0 380 aa13.39□□□□□ -0.27
USP39-207ENST00000450066 PCDHGA12O60330 932 aa13.39□□□□□ -0.27
USP39-207ENST00000450066 LDB3O75112 727 aa13.39□□□□□ -0.27
USP39-207ENST00000450066 OR2B3O76000 313 aa13.39□□□□□ -0.27
USP39-207ENST00000450066 SLITRK5O94991 958 aa13.39□□□□□ -0.27
USP39-207ENST00000450066 RPSAP08865 295 aaKnown RBP13.39□□□□□ -0.27
USP39-207ENST00000450066 NELFEP18615 380 aaKnown RBP13.39□□□□□ -0.27
USP39-207ENST00000450066 AVPR1BP47901 424 aa13.39□□□□□ -0.27
USP39-207ENST00000450066 CLCN2P51788 898 aa13.39□□□□□ -0.27
USP39-207ENST00000450066 FAM214AQ32MH5 1076 aa13.39□□□□□ -0.27
USP39-207ENST00000450066 TMEM71Q6P5X7 295 aa13.39□□□□□ -0.27
USP39-207ENST00000450066 EID2Q8N6I1 236 aa13.39□□□□□ -0.27
USP39-207ENST00000450066 NUP43Q8NFH3 380 aa13.39□□□□□ -0.27
USP39-207ENST00000450066 KAT2AQ92830 837 aa13.39□□□□□ -0.27
USP39-207ENST00000450066 NAT6Q93015 286 aa13.39□□□□□ -0.27
USP39-207ENST00000450066 TAMM41Q96BW9 452 aa13.39□□□□□ -0.27
USP39-207ENST00000450066 TPD52L3Q96J77 140 aa13.39□□□□□ -0.27
USP39-207ENST00000450066 ZNF768Q9H5H4 540 aaKnown RBP13.39□□□□□ -0.27
USP39-207ENST00000450066 PTGFRNQ9P2B2 879 aa13.39□□□□□ -0.27
USP39-207ENST00000450066 P2RX2Q9UBL9 471 aa13.39□□□□□ -0.27
USP39-207ENST00000450066 RAB26Q9ULW5 256 aa13.39□□□□□ -0.27
USP39-207ENST00000450066 TMEM150CB9EJG8 249 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 H0YIG0 161 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 M0QX08 132 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 PDLIM1O00151 329 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 RASAL1O95294 804 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 FABP3P05413 133 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 BCHEP06276 602 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 OR12D1P0DN82 309 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 PPP2R1BP30154 601 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 KCNJ10P78508 379 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 LASP1Q14847 261 aaKnown RBP13.38□□□□□ -0.27
USP39-207ENST00000450066 MAPK11Q15759 364 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 SWT1Q5T5J6 900 aaKnown RBP13.38□□□□□ -0.27
USP39-207ENST00000450066 PIWIL3Q7Z3Z3 882 aaKnown RBP13.38□□□□□ -0.27
USP39-207ENST00000450066 OR2L13Q8N349 312 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 OR7G2Q8NG99 324 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 OR5D16Q8NGK9 328 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 OR2I1PQ8NGU4 316 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 LZICQ8WZA0 190 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 TMBIM1Q969X1 311 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 ANKRD9Q96BM1 317 aaPredicted RBP13.38□□□□□ -0.27
USP39-207ENST00000450066 TMEM19Q96HH6 336 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 HCN3Q9P1Z3 774 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 TRPC4Q9UBN4 977 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 MRPS33Q9Y291 106 aaKnown RBP13.38□□□□□ -0.27
USP39-207ENST00000450066 AK5Q9Y6K8 562 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 GNGT2O14610 69 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 CASC3O15234 703 aaKnown RBP13.38□□□□□ -0.27
USP39-207ENST00000450066 ASNA1O43681 348 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 PGM3O95394 542 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 CPNE6O95741 557 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 IFI6P09912 130 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 ZNF23P17027 643 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 MRPS35P82673 323 aaKnown RBP13.38□□□□□ -0.27
USP39-207ENST00000450066 ID2Q02363 134 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 ZNF628Q5EBL2 1059 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 PERM1Q5SV97 790 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 TLDC1Q6P9B6 456 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 LGI4Q8N135 537 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 XAGE5Q8WWM1 108 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 MMABQ96EY8 250 aaPredicted RBP13.38□□□□□ -0.27
USP39-207ENST00000450066 Q9H521 79 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 DDX18Q9NVP1 670 aaKnown RBP13.38□□□□□ -0.27
USP39-207ENST00000450066 GMEB2Q9UKD1 530 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 BAG5Q9UL15 447 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 PADI2Q9Y2J8 665 aa13.38□□□□□ -0.27
USP39-207ENST00000450066 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.37□□□□□ -0.27
USP39-207ENST00000450066 C7orf72A4D263 438 aa13.37□□□□□ -0.27
USP39-207ENST00000450066 A8MU76 341 aa13.37□□□□□ -0.27
USP39-207ENST00000450066 DENRO43583 198 aaKnown RBP13.37□□□□□ -0.27
USP39-207ENST00000450066 PDE9AO76083 593 aa13.37□□□□□ -0.27
USP39-207ENST00000450066 OPN1SWP03999 348 aa13.37□□□□□ -0.27
USP39-207ENST00000450066 FOLR1P15328 257 aa13.37□□□□□ -0.27
USP39-207ENST00000450066 MAN2A2P49641 1150 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms