RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 MMP21Q8N119 569 aa16.22■□□□□ 0.19
FAM3A-216ENST00000449971 NRGNQ92686 78 aa16.22■□□□□ 0.19
FAM3A-216ENST00000449971 CCDC126Q96EE4 140 aa16.22■□□□□ 0.19
FAM3A-216ENST00000449971 L3HYPDHQ96EM0 354 aa16.22■□□□□ 0.19
FAM3A-216ENST00000449971 ENKD1Q9H0I2 346 aa16.22■□□□□ 0.19
FAM3A-216ENST00000449971 COQ3Q9NZJ6 369 aa16.22■□□□□ 0.19
FAM3A-216ENST00000449971 VPS29Q9UBQ0 182 aa16.22■□□□□ 0.19
FAM3A-216ENST00000449971 GRID1Q9ULK0 1009 aa16.22■□□□□ 0.19
FAM3A-216ENST00000449971 ERVK-19Q9WJR5 959 aa16.22■□□□□ 0.19
FAM3A-216ENST00000449971 STK38LQ9Y2H1 464 aa16.22■□□□□ 0.19
FAM3A-216ENST00000449971 INTS1Q8N201 2190 aaKnown RBP16.21■□□□□ 0.19
FAM3A-216ENST00000449971 FAM90A27PA6NNH2 459 aa16.21■□□□□ 0.19
FAM3A-216ENST00000449971 G3V2L1 256 aa16.21■□□□□ 0.19
FAM3A-216ENST00000449971 COPEO14579 308 aa16.21■□□□□ 0.19
FAM3A-216ENST00000449971 PRRG2O14669 202 aa16.21■□□□□ 0.19
FAM3A-216ENST00000449971 ASNA1O43681 348 aa16.21■□□□□ 0.19
FAM3A-216ENST00000449971 ULK1O75385 1050 aa16.21■□□□□ 0.19
FAM3A-216ENST00000449971 PROCP04070 461 aa16.21■□□□□ 0.19
FAM3A-216ENST00000449971 IGKV3-11P04433 115 aa16.21■□□□□ 0.19
FAM3A-216ENST00000449971 SLC35E2P0CK97 266 aa16.21■□□□□ 0.19
FAM3A-216ENST00000449971 CD99P14209 185 aa16.21■□□□□ 0.19
FAM3A-216ENST00000449971 ZNF24P17028 368 aa16.21■□□□□ 0.19
FAM3A-216ENST00000449971 RFC3P40938 356 aa16.21■□□□□ 0.19
FAM3A-216ENST00000449971 PKNOX1P55347 436 aa16.21■□□□□ 0.19
FAM3A-216ENST00000449971 GPR85P60893 370 aa16.21■□□□□ 0.19
FAM3A-216ENST00000449971 VSNL1P62760 191 aa16.21■□□□□ 0.19
FAM3A-216ENST00000449971 GALNT1Q10472 559 aaPredicted RBP16.21■□□□□ 0.19
FAM3A-216ENST00000449971 TBL3Q12788 808 aaKnown RBP16.21■□□□□ 0.19
FAM3A-216ENST00000449971 ASPHQ12797 758 aa16.21■□□□□ 0.19
FAM3A-216ENST00000449971 LCP2Q13094 533 aa16.21■□□□□ 0.19
FAM3A-216ENST00000449971 ZNF750Q32MQ0 723 aa16.21■□□□□ 0.19
FAM3A-216ENST00000449971 RNFT1Q5M7Z0 435 aa16.21■□□□□ 0.19
FAM3A-216ENST00000449971 NDUFAF5Q5TEU4 345 aa16.21■□□□□ 0.19
FAM3A-216ENST00000449971 ZYG11AQ6WRX3 759 aa16.21■□□□□ 0.19
FAM3A-216ENST00000449971 GHDCQ8N2G8 530 aa16.21■□□□□ 0.19
FAM3A-216ENST00000449971 C1orf52Q8N6N3 182 aaKnown RBP16.21■□□□□ 0.19
FAM3A-216ENST00000449971 CCDC63Q8NA47 563 aa16.21■□□□□ 0.19
FAM3A-216ENST00000449971 POGLUT1Q8NBL1 392 aa16.21■□□□□ 0.19
FAM3A-216ENST00000449971 OR4K14Q8NGD5 310 aa16.21■□□□□ 0.19
FAM3A-216ENST00000449971 FBXL20Q96IG2 436 aa16.21■□□□□ 0.19
FAM3A-216ENST00000449971 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.21■□□□□ 0.19
FAM3A-216ENST00000449971 PRRC2AP48634 2157 aaKnown RBP16.2■□□□□ 0.18
FAM3A-216ENST00000449971 A0A1W2PS29 197 aa16.2■□□□□ 0.18
FAM3A-216ENST00000449971 CDH16O75309 829 aa16.2■□□□□ 0.18
FAM3A-216ENST00000449971 HSD3B1P14060 373 aa16.2■□□□□ 0.18
FAM3A-216ENST00000449971 CHN1P15882 459 aa16.2■□□□□ 0.18
FAM3A-216ENST00000449971 KRT4P19013 534 aa16.2■□□□□ 0.18
FAM3A-216ENST00000449971 HSD3B2P26439 372 aa16.2■□□□□ 0.18
FAM3A-216ENST00000449971 CRHR1P34998 444 aa16.2■□□□□ 0.18
FAM3A-216ENST00000449971 DEKP35659 375 aaKnown RBP16.2■□□□□ 0.18
FAM3A-216ENST00000449971 XKP51811 444 aa16.2■□□□□ 0.18
FAM3A-216ENST00000449971 CCDC153Q494R4 210 aa16.2■□□□□ 0.18
FAM3A-216ENST00000449971 PIGGQ5H8A4 983 aa16.2■□□□□ 0.18
FAM3A-216ENST00000449971 OPN5Q6U736 354 aa16.2■□□□□ 0.18
FAM3A-216ENST00000449971 RNF111Q6ZNA4 994 aa16.2■□□□□ 0.18
FAM3A-216ENST00000449971 SIAH3Q8IW03 269 aa16.2■□□□□ 0.18
FAM3A-216ENST00000449971 C9orf40Q8IXQ3 194 aa16.2■□□□□ 0.18
FAM3A-216ENST00000449971 PSD4Q8NDX1 1056 aa16.2■□□□□ 0.18
FAM3A-216ENST00000449971 OR2W6PQ8NHA6 318 aa16.2■□□□□ 0.18
FAM3A-216ENST00000449971 C12orf65Q9H3J6 166 aaKnown RBP16.2■□□□□ 0.18
FAM3A-216ENST00000449971 GSTO2Q9H4Y5 243 aa16.2■□□□□ 0.18
FAM3A-216ENST00000449971 MID1IP1Q9NPA3 183 aa16.2■□□□□ 0.18
FAM3A-216ENST00000449971 TIMM22Q9Y584 194 aa16.2■□□□□ 0.18
FAM3A-216ENST00000449971 PCDHA9Q9Y5H5 950 aa16.2■□□□□ 0.18
FAM3A-216ENST00000449971 MAP1AP78559 2803 aaPredicted RBP16.19■□□□□ 0.18
FAM3A-216ENST00000449971 ZNF469Q96JG9 3925 aaPredicted RBP16.19■□□□□ 0.18
FAM3A-216ENST00000449971 DNHD1Q96M86 4753 aa16.19■□□□□ 0.18
FAM3A-216ENST00000449971 CCDC151A5D8V7 595 aa16.19■□□□□ 0.18
FAM3A-216ENST00000449971 NKX2-6A6NCS4 301 aa16.19■□□□□ 0.18
FAM3A-216ENST00000449971 TFECO14948 347 aaPredicted RBP16.19■□□□□ 0.18
FAM3A-216ENST00000449971 PLIN3O60664 434 aa16.19■□□□□ 0.18
FAM3A-216ENST00000449971 ZNF354AO60765 605 aaPredicted RBP16.19■□□□□ 0.18
FAM3A-216ENST00000449971 SLU7O95391 586 aaKnown RBP16.19■□□□□ 0.18
FAM3A-216ENST00000449971 ESRRBO95718 433 aa16.19■□□□□ 0.18
FAM3A-216ENST00000449971 ENO1P06733 434 aaKnown RBP16.19■□□□□ 0.18
FAM3A-216ENST00000449971 CPA3P15088 417 aa16.19■□□□□ 0.18
FAM3A-216ENST00000449971 HOXB4P17483 251 aaPredicted RBP16.19■□□□□ 0.18
FAM3A-216ENST00000449971 GALNSP34059 522 aa16.19■□□□□ 0.18
FAM3A-216ENST00000449971 HTR6P50406 440 aa16.19■□□□□ 0.18
FAM3A-216ENST00000449971 NAGLUP54802 743 aa16.19■□□□□ 0.18
FAM3A-216ENST00000449971 CSTF3Q12996 717 aaKnown RBP16.19■□□□□ 0.18
FAM3A-216ENST00000449971 MPEG1Q2M385 716 aa16.19■□□□□ 0.18
FAM3A-216ENST00000449971 SPRED3Q2MJR0 410 aa16.19■□□□□ 0.18
FAM3A-216ENST00000449971 CFAP157Q5JU67 520 aa16.19■□□□□ 0.18
FAM3A-216ENST00000449971 SCIMPQ6UWF3 145 aa16.19■□□□□ 0.18
FAM3A-216ENST00000449971 RTL4Q6ZR62 310 aa16.19■□□□□ 0.18
FAM3A-216ENST00000449971 SLC29A4Q7RTT9 530 aa16.19■□□□□ 0.18
FAM3A-216ENST00000449971 C4orf33Q8N1A6 199 aa16.19■□□□□ 0.18
FAM3A-216ENST00000449971 NUBPLQ8TB37 319 aa16.19■□□□□ 0.18
FAM3A-216ENST00000449971 TM4SF18Q96CE8 201 aa16.19■□□□□ 0.18
FAM3A-216ENST00000449971 GAL3ST4Q96RP7 486 aa16.19■□□□□ 0.18
FAM3A-216ENST00000449971 KCNA7Q96RP8 456 aa16.19■□□□□ 0.18
FAM3A-216ENST00000449971 AKAP6Q13023 2319 aa16.18■□□□□ 0.18
FAM3A-216ENST00000449971 C1orf226A1L170 272 aa16.18■□□□□ 0.18
FAM3A-216ENST00000449971 E9PLN8 166 aa16.18■□□□□ 0.18
FAM3A-216ENST00000449971 G3V3Y1 287 aa16.18■□□□□ 0.18
FAM3A-216ENST00000449971 ERAL1O75616 437 aaKnown RBP16.18■□□□□ 0.18
FAM3A-216ENST00000449971 TPOP07202 933 aa16.18■□□□□ 0.18
FAM3A-216ENST00000449971 CPMP14384 443 aa16.18■□□□□ 0.18
FAM3A-216ENST00000449971 NT5EP21589 574 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms