RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 CD3EP07766 207 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 RBP3P10745 1247 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 APEHP13798 732 aaKnown RBP7.08□□□□□ -1.28
LINC01961-201ENST00000449954 CTNNA2P26232 953 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 KIR2DL2P43627 348 aaPredicted RBP7.08□□□□□ -1.28
LINC01961-201ENST00000449954 TTPAP49638 278 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 TBPL1P62380 186 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 CCZ1BP86790 482 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 CCZ1P86791 482 aaPredicted RBP7.08□□□□□ -1.28
LINC01961-201ENST00000449954 SRYQ05066 204 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 FUT7Q11130 342 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 NTRK2Q16620 822 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 AGAP6Q5VW22 663 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 USP43Q70EL4 1123 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 KLHDC8BQ8IXV7 354 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 ZNF595Q8IYB9 648 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 LRRC56Q8IYG6 542 aaPredicted RBP7.08□□□□□ -1.28
LINC01961-201ENST00000449954 TBC1D19Q8N5T2 526 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 FAM83FQ8NEG4 500 aaPredicted RBP7.08□□□□□ -1.28
LINC01961-201ENST00000449954 OR13J1Q8NGT2 312 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 OR4L1Q8NH43 312 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 NT5CQ8TCD5 201 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 SLC2A12Q8TD20 617 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 PTPMT1Q8WUK0 201 aaPredicted RBP7.08□□□□□ -1.28
LINC01961-201ENST00000449954 SREK1Q8WXA9 508 aaKnown RBP7.08□□□□□ -1.28
LINC01961-201ENST00000449954 DIO2Q92813 273 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 MRPL24Q96A35 216 aaKnown RBP7.08□□□□□ -1.28
LINC01961-201ENST00000449954 CTHRC1Q96CG8 243 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 RILPQ96NA2 401 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 JMJD8Q96S16 334 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 NGBQ9NPG2 151 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 DNAJC11Q9NVH1 559 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 UVRAGQ9P2Y5 699 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 ANAPC5Q9UJX4 755 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 PROCRQ9UNN8 238 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 SH2B3Q9UQQ2 575 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 B3GALT5Q9Y2C3 310 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 SNX8Q9Y5X2 465 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 NINQ8N4C6 2090 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 SLC22A20A6NK97 555 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 NDUFS8O00217 210 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 PLOD2O00469 737 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 TP53I11O14683 189 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 CST8O60676 142 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 CDH16O75309 829 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 TGM6O95932 706 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 CD8AP01732 235 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 PCMT1P22061 227 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 RPS3P23396 243 aaKnown RBP eCLIP7.07□□□□□ -1.28
LINC01961-201ENST00000449954 IMPA1P29218 277 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 HILS1P60008 231 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 SIRPAP78324 504 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 GGTLC2Q14390 218 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 RAB35Q15286 201 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 RPS6KA2Q15349 733 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 NCMAPQ5T1S8 102 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 LRRC38Q5VT99 294 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 FNDC7Q5VTL7 733 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 E4F1Q66K89 784 aaPredicted RBP7.07□□□□□ -1.28
LINC01961-201ENST00000449954 PEG10Q86TG7 708 aaKnown RBP7.07□□□□□ -1.28
LINC01961-201ENST00000449954 CILP2Q8IUL8 1156 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 CA13Q8N1Q1 262 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 RNF214Q8ND24 703 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 UTP15Q8TED0 518 aaKnown RBP7.07□□□□□ -1.28
LINC01961-201ENST00000449954 ATL1Q8WXF7 558 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 RHBDF1Q96CC6 855 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 TMEM41AQ96HV5 264 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 RUNDC3BQ96NL0 473 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 GNRHR2Q96P88 292 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 CACNG6Q9BXT2 260 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 ACTR6Q9GZN1 396 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 P2RY12Q9H244 342 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 LRRC40Q9H9A6 602 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 MED29Q9NX70 200 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 DDX56Q9NY93 547 aaKnown RBP7.07□□□□□ -1.28
LINC01961-201ENST00000449954 CTTNBP2NLQ9P2B4 639 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 VTI1BQ9UEU0 232 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 TMEFF2Q9UIK5 374 aaPredicted RBP7.07□□□□□ -1.28
LINC01961-201ENST00000449954 RIMKLBQ9ULI2 386 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 DTX4Q9Y2E6 619 aa7.07□□□□□ -1.28
LINC01961-201ENST00000449954 TRBC2A0A5B9 178 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 CAPN14A8MX76 684 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 C17orf105B2RV13 164 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 H3BMM5 538 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 LRATO95237 230 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 SYF2O95926 243 aaKnown RBP7.06□□□□□ -1.28
LINC01961-201ENST00000449954 SERPIND1P05546 499 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 CCND1P24385 295 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 RBL1P28749 1068 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 DEKP35659 375 aaKnown RBP7.06□□□□□ -1.28
LINC01961-201ENST00000449954 SKIV2L2P42285 1042 aaKnown RBP7.06□□□□□ -1.28
LINC01961-201ENST00000449954 CDKN2BP42772 138 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 MSH2P43246 934 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 TMED10P49755 219 aaKnown RBP7.06□□□□□ -1.28
LINC01961-201ENST00000449954 RAB38P57729 211 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 RPP38P78345 283 aaKnown RBP7.06□□□□□ -1.28
LINC01961-201ENST00000449954 PRAMEP78395 509 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 IRX1P78414 480 aaPredicted RBP7.06□□□□□ -1.28
LINC01961-201ENST00000449954 ACVR1Q04771 509 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 LGALS3BPQ08380 585 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms