RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 MESP2Q0VG99 397 aa12.94□□□□□ -0.34
POLR1B-209ENST00000448770 ASAH1Q13510 395 aa12.94□□□□□ -0.34
POLR1B-209ENST00000448770 CASP12Q6UXS9 341 aa12.94□□□□□ -0.34
POLR1B-209ENST00000448770 C6orf120Q7Z4R8 191 aa12.94□□□□□ -0.34
POLR1B-209ENST00000448770 FAM129CQ86XR2 697 aa12.94□□□□□ -0.34
POLR1B-209ENST00000448770 TRIM48Q8IWZ4 208 aa12.94□□□□□ -0.34
POLR1B-209ENST00000448770 FBXO15Q8NCQ5 510 aaPredicted RBP12.94□□□□□ -0.34
POLR1B-209ENST00000448770 OR8J1Q8NGP2 316 aa12.94□□□□□ -0.34
POLR1B-209ENST00000448770 MTERF3Q96E29 417 aa12.94□□□□□ -0.34
POLR1B-209ENST00000448770 ZNF582Q96NG8 517 aaPredicted RBP12.94□□□□□ -0.34
POLR1B-209ENST00000448770 PRRG3Q9BZD7 231 aa12.94□□□□□ -0.34
POLR1B-209ENST00000448770 KCNK12Q9HB15 430 aa12.94□□□□□ -0.34
POLR1B-209ENST00000448770 TEX10Q9NXF1 929 aaPredicted RBP12.94□□□□□ -0.34
POLR1B-209ENST00000448770 HCN2Q9UL51 889 aa12.94□□□□□ -0.34
POLR1B-209ENST00000448770 TMCC3Q9ULS5 477 aa12.94□□□□□ -0.34
POLR1B-209ENST00000448770 DNMT3AQ9Y6K1 912 aaPredicted RBP12.94□□□□□ -0.34
POLR1B-209ENST00000448770 HMX3A6NHT5 357 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 C5orf58C9J3I9 102 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 TMPRSS11DO60235 418 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 ALDH1A1P00352 501 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 LALBAP00709 142 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 SYN1P17600 705 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 DDCP20711 480 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 PSMB5P28074 263 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 RECQLP46063 649 aaPredicted RBP12.93□□□□□ -0.34
POLR1B-209ENST00000448770 DEFB103AP81534 67 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 EFNB1P98172 346 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 OCLNQ16625 522 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 LY6G5CQ5SRR4 150 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 PAMR1Q6UXH9 720 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 UNC5DQ6UXZ4 953 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 GDPGP1Q6ZNW5 385 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 USP30Q70CQ3 517 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 NLGN4YQ8NFZ3 816 aaPredicted RBP12.93□□□□□ -0.34
POLR1B-209ENST00000448770 OR5AR1Q8NGP9 310 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 LRR1Q96L50 414 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 NECTIN4Q96NY8 510 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 KATNB1Q9BVA0 655 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 ZDHHC5Q9C0B5 715 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 SNX7Q9UNH6 387 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 SSR3Q9UNL2 185 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 GPR52Q9Y2T5 361 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 RPL36Q9Y3U8 105 aaKnown RBP12.93□□□□□ -0.34
POLR1B-209ENST00000448770 SPIN1Q9Y657 262 aaPredicted RBP12.93□□□□□ -0.34
POLR1B-209ENST00000448770 CDH23Q9H251 3354 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 A0A0G2JN53 185 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 SHISA3A0PJX4 238 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 FEZF1A0PJY2 475 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 MYL12BO14950 172 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 CCL16O15467 120 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 PRKRAO75569 313 aaKnown RBP12.93□□□□□ -0.34
POLR1B-209ENST00000448770 ACADLP28330 430 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 BSGP35613 385 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 PCBP4P57723 403 aaKnown RBP12.93□□□□□ -0.34
POLR1B-209ENST00000448770 GALK2Q01415 458 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 INSL4Q14641 139 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 GINS1Q14691 196 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 TRMT11Q7Z4G4 463 aaKnown RBP12.93□□□□□ -0.34
POLR1B-209ENST00000448770 C11orf74Q86VG3 221 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 RDH10Q8IZV5 341 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 EXOSC8Q96B26 276 aaKnown RBP12.93□□□□□ -0.34
POLR1B-209ENST00000448770 ZNF354BQ96LW1 612 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 TREX2Q9BQ50 279 aaPredicted RBP12.93□□□□□ -0.34
POLR1B-209ENST00000448770 EGLN3Q9H6Z9 239 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 MALT1Q9UDY8 824 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 FBXW2Q9UKT8 454 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 NDRG2Q9UN36 371 aaKnown RBP12.93□□□□□ -0.34
POLR1B-209ENST00000448770 DIMT1Q9UNQ2 313 aaKnown RBP12.93□□□□□ -0.34
POLR1B-209ENST00000448770 MAU2Q9Y6X3 613 aa12.93□□□□□ -0.34
POLR1B-209ENST00000448770 CXorf51AA0A1B0GTR3 108 aa12.92□□□□□ -0.34
POLR1B-209ENST00000448770 CENPXA8MT69 81 aa12.92□□□□□ -0.34
POLR1B-209ENST00000448770 QSOX1O00391 747 aa12.92□□□□□ -0.34
POLR1B-209ENST00000448770 NDUFB5O43674 189 aa12.92□□□□□ -0.34
POLR1B-209ENST00000448770 EPHX1P07099 455 aa12.92□□□□□ -0.34
POLR1B-209ENST00000448770 CPEP16870 476 aa12.92□□□□□ -0.34
POLR1B-209ENST00000448770 PRKCAP17252 672 aa12.92□□□□□ -0.34
POLR1B-209ENST00000448770 APEX1P27695 318 aaKnown RBP12.92□□□□□ -0.34
POLR1B-209ENST00000448770 RPL3P39023 403 aaKnown RBP12.92□□□□□ -0.34
POLR1B-209ENST00000448770 MANFP55145 182 aaKnown RBP12.92□□□□□ -0.34
POLR1B-209ENST00000448770 CD83Q01151 205 aa12.92□□□□□ -0.34
POLR1B-209ENST00000448770 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.92□□□□□ -0.34
POLR1B-209ENST00000448770 ZNF805Q5CZA5 627 aa12.92□□□□□ -0.34
POLR1B-209ENST00000448770 PRAMEF14Q5SWL7 426 aa12.92□□□□□ -0.34
POLR1B-209ENST00000448770 PRAMEF13Q5VWM6 474 aa12.92□□□□□ -0.34
POLR1B-209ENST00000448770 ZNF438Q7Z4V0 828 aa12.92□□□□□ -0.34
POLR1B-209ENST00000448770 OR8D4Q8NGM9 314 aa12.92□□□□□ -0.34
POLR1B-209ENST00000448770 OR52P1PQ8NH57 321 aa12.92□□□□□ -0.34
POLR1B-209ENST00000448770 RAET1EQ8TD07 263 aa12.92□□□□□ -0.34
POLR1B-209ENST00000448770 IRF7Q92985 503 aa12.92□□□□□ -0.34
POLR1B-209ENST00000448770 ZNF689Q96CS4 500 aaPredicted RBP12.92□□□□□ -0.34
POLR1B-209ENST00000448770 DIRAS2Q96HU8 199 aa12.92□□□□□ -0.34
POLR1B-209ENST00000448770 DEPDC7Q96QD5 511 aa12.92□□□□□ -0.34
POLR1B-209ENST00000448770 ZSCAN32Q9NX65 697 aa12.92□□□□□ -0.34
POLR1B-209ENST00000448770 TOR4AQ9NXH8 423 aa12.92□□□□□ -0.34
POLR1B-209ENST00000448770 IL36AQ9UHA7 158 aa12.92□□□□□ -0.34
POLR1B-209ENST00000448770 DVL2O14641 736 aa12.91□□□□□ -0.34
POLR1B-209ENST00000448770 POLR1CO15160 346 aaPredicted RBP12.91□□□□□ -0.34
POLR1B-209ENST00000448770 SEC14L5O43304 696 aa12.91□□□□□ -0.34
POLR1B-209ENST00000448770 NME6O75414 186 aaPredicted RBP12.91□□□□□ -0.34
POLR1B-209ENST00000448770 MOSPD3O75425 235 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms