RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 FAM180BQ6P0A1 224 aa23.21■■□□□ 1.31
HTATSF1-203ENST00000448450 SLC48A1Q6P1K1 146 aa23.21■■□□□ 1.31
HTATSF1-203ENST00000448450 TRIM46Q7Z4K8 759 aa23.21■■□□□ 1.31
HTATSF1-203ENST00000448450 GALNTL5Q7Z4T8 443 aa23.21■■□□□ 1.31
HTATSF1-203ENST00000448450 FJX1Q86VR8 437 aa23.21■■□□□ 1.31
HTATSF1-203ENST00000448450 ZNF227Q86WZ6 799 aa23.21■■□□□ 1.31
HTATSF1-203ENST00000448450 C16orf78Q8WTQ4 265 aa23.21■■□□□ 1.31
HTATSF1-203ENST00000448450 KLHL29Q96CT2 875 aa23.21■■□□□ 1.31
HTATSF1-203ENST00000448450 ART5Q96L15 291 aa23.21■■□□□ 1.31
HTATSF1-203ENST00000448450 RRAGDQ9NQL2 400 aaPredicted RBP23.21■■□□□ 1.31
HTATSF1-203ENST00000448450 SLC25A12O75746 678 aa23.2■■□□□ 1.3
HTATSF1-203ENST00000448450 IGKV3-11P04433 115 aa23.2■■□□□ 1.3
HTATSF1-203ENST00000448450 ANXA4P09525 319 aaPredicted RBP23.2■■□□□ 1.3
HTATSF1-203ENST00000448450 CPMP14384 443 aa23.2■■□□□ 1.3
HTATSF1-203ENST00000448450 PORP16435 677 aaPredicted RBP23.2■■□□□ 1.3
HTATSF1-203ENST00000448450 NT5EP21589 574 aa23.2■■□□□ 1.3
HTATSF1-203ENST00000448450 SP5Q6BEB4 398 aaPredicted RBP23.2■■□□□ 1.3
HTATSF1-203ENST00000448450 LRIG3Q6UXM1 1119 aa23.2■■□□□ 1.3
HTATSF1-203ENST00000448450 OR5L2Q8NGL0 311 aa23.2■■□□□ 1.3
HTATSF1-203ENST00000448450 CDC26Q8NHZ8 85 aa23.2■■□□□ 1.3
HTATSF1-203ENST00000448450 ASB15Q8WXK1 588 aa23.2■■□□□ 1.3
HTATSF1-203ENST00000448450 SCMH1Q96GD3 660 aa23.2■■□□□ 1.3
HTATSF1-203ENST00000448450 PKNOX2Q96KN3 472 aa23.2■■□□□ 1.3
HTATSF1-203ENST00000448450 KCNK9Q9NPC2 374 aa23.2■■□□□ 1.3
HTATSF1-203ENST00000448450 ERVK-11Q9UQG0 969 aa23.2■■□□□ 1.3
HTATSF1-203ENST00000448450 TACC2O95359 2948 aa23.19■■□□□ 1.3
HTATSF1-203ENST00000448450 POLQO75417 2590 aa23.19■■□□□ 1.3
HTATSF1-203ENST00000448450 CELSR1Q9NYQ6 3014 aa23.19■■□□□ 1.3
HTATSF1-203ENST00000448450 TMEM233B4DJY2 109 aa23.19■■□□□ 1.3
HTATSF1-203ENST00000448450 PTGER1P34995 402 aa23.19■■□□□ 1.3
HTATSF1-203ENST00000448450 ETV4P43268 484 aa23.19■■□□□ 1.3
HTATSF1-203ENST00000448450 INAQ16352 499 aa23.19■■□□□ 1.3
HTATSF1-203ENST00000448450 SPRED3Q2MJR0 410 aa23.19■■□□□ 1.3
HTATSF1-203ENST00000448450 BEND6Q5SZJ8 279 aaPredicted RBP23.19■■□□□ 1.3
HTATSF1-203ENST00000448450 IL20RBQ6UXL0 311 aa23.19■■□□□ 1.3
HTATSF1-203ENST00000448450 RNF111Q6ZNA4 994 aa23.19■■□□□ 1.3
HTATSF1-203ENST00000448450 CROCCP2Q86T23 111 aa23.19■■□□□ 1.3
HTATSF1-203ENST00000448450 NUDCD3Q8IVD9 361 aa23.19■■□□□ 1.3
HTATSF1-203ENST00000448450 C9orf40Q8IXQ3 194 aa23.19■■□□□ 1.3
HTATSF1-203ENST00000448450 CYP4Z2PQ8N1L4 340 aa23.19■■□□□ 1.3
HTATSF1-203ENST00000448450 TMEM178AQ8NBL3 297 aa23.19■■□□□ 1.3
HTATSF1-203ENST00000448450 OR8K3Q8NH51 312 aa23.19■■□□□ 1.3
HTATSF1-203ENST00000448450 AGR3Q8TD06 166 aa23.19■■□□□ 1.3
HTATSF1-203ENST00000448450 TMEM125Q96AQ2 219 aa23.19■■□□□ 1.3
HTATSF1-203ENST00000448450 RASL10BQ96S79 203 aa23.19■■□□□ 1.3
HTATSF1-203ENST00000448450 TRIM45Q9H8W5 580 aaPredicted RBP23.19■■□□□ 1.3
HTATSF1-203ENST00000448450 CXorf21Q9HAI6 301 aa23.19■■□□□ 1.3
HTATSF1-203ENST00000448450 PSME2Q9UL46 239 aa23.19■■□□□ 1.3
HTATSF1-203ENST00000448450 PCDHGB6Q9Y5F9 930 aa23.19■■□□□ 1.3
HTATSF1-203ENST00000448450 CDK2AP1O14519 115 aa23.18■■□□□ 1.3
HTATSF1-203ENST00000448450 OR6B1O95007 311 aa23.18■■□□□ 1.3
HTATSF1-203ENST00000448450 CT62P0C5K7 136 aa23.18■■□□□ 1.3
HTATSF1-203ENST00000448450 SSTR4P31391 388 aa23.18■■□□□ 1.3
HTATSF1-203ENST00000448450 GALNSP34059 522 aa23.18■■□□□ 1.3
HTATSF1-203ENST00000448450 SOX3P41225 446 aa23.18■■□□□ 1.3
HTATSF1-203ENST00000448450 SERPINB4P48594 390 aa23.18■■□□□ 1.3
HTATSF1-203ENST00000448450 TNFAIP8L3Q5GJ75 292 aa23.18■■□□□ 1.3
HTATSF1-203ENST00000448450 GALNT18Q6P9A2 607 aa23.18■■□□□ 1.3
HTATSF1-203ENST00000448450 PNPLA5Q7Z6Z6 429 aaPredicted RBP23.18■■□□□ 1.3
HTATSF1-203ENST00000448450 MCEMP1Q8IX19 187 aa23.18■■□□□ 1.3
HTATSF1-203ENST00000448450 GALNT12Q8IXK2 581 aa23.18■■□□□ 1.3
HTATSF1-203ENST00000448450 C11orf24Q96F05 449 aaPredicted RBP23.18■■□□□ 1.3
HTATSF1-203ENST00000448450 EML4Q9HC35 981 aaKnown RBP23.18■■□□□ 1.3
HTATSF1-203ENST00000448450 PFDN4Q9NQP4 134 aa23.18■■□□□ 1.3
HTATSF1-203ENST00000448450 TRAF6Q9Y4K3 522 aa23.18■■□□□ 1.3
HTATSF1-203ENST00000448450 POLR3HQ9Y535 204 aaPredicted RBP23.18■■□□□ 1.3
HTATSF1-203ENST00000448450 PDZD2O15018 2839 aa23.18■■□□□ 1.3
HTATSF1-203ENST00000448450 GOLGA6L10A6NI86 522 aa23.17■■□□□ 1.3
HTATSF1-203ENST00000448450 A8MVJ9 347 aa23.17■■□□□ 1.3
HTATSF1-203ENST00000448450 SLC28A1O00337 649 aa23.17■■□□□ 1.3
HTATSF1-203ENST00000448450 ZNF354AO60765 605 aaPredicted RBP23.17■■□□□ 1.3
HTATSF1-203ENST00000448450 SEC22BO75396 215 aa23.17■■□□□ 1.3
HTATSF1-203ENST00000448450 CHEK2O96017 543 aa23.17■■□□□ 1.3
HTATSF1-203ENST00000448450 CRYABP02511 175 aaKnown RBP23.17■■□□□ 1.3
HTATSF1-203ENST00000448450 LINC00032P0C843 101 aa23.17■■□□□ 1.3
HTATSF1-203ENST00000448450 MYZAPP0CAP1 466 aa23.17■■□□□ 1.3
HTATSF1-203ENST00000448450 DRD2P14416 443 aa23.17■■□□□ 1.3
HTATSF1-203ENST00000448450 CSNK2A2P19784 350 aaPredicted RBP23.17■■□□□ 1.3
HTATSF1-203ENST00000448450 DUSP2Q05923 314 aa23.17■■□□□ 1.3
HTATSF1-203ENST00000448450 MPP2Q14168 576 aa23.17■■□□□ 1.3
HTATSF1-203ENST00000448450 C6orf163Q5TEZ5 329 aa23.17■■□□□ 1.3
HTATSF1-203ENST00000448450 KANK2Q63ZY3 851 aa23.17■■□□□ 1.3
HTATSF1-203ENST00000448450 ZNF324BQ6AW86 544 aaPredicted RBP23.17■■□□□ 1.3
HTATSF1-203ENST00000448450 MDGA2Q7Z553 956 aa23.17■■□□□ 1.3
HTATSF1-203ENST00000448450 DNAJB8Q8NHS0 232 aa23.17■■□□□ 1.3
HTATSF1-203ENST00000448450 PPP1R14CQ8TAE6 165 aa23.17■■□□□ 1.3
HTATSF1-203ENST00000448450 EXOSC8Q96B26 276 aaKnown RBP23.17■■□□□ 1.3
HTATSF1-203ENST00000448450 CNRIP1Q96F85 164 aaPredicted RBP23.17■■□□□ 1.3
HTATSF1-203ENST00000448450 PGM2Q96G03 612 aa23.17■■□□□ 1.3
HTATSF1-203ENST00000448450 GAL3ST4Q96RP7 486 aa23.17■■□□□ 1.3
HTATSF1-203ENST00000448450 BRINP2Q9C0B6 783 aa23.17■■□□□ 1.3
HTATSF1-203ENST00000448450 TUBB1Q9H4B7 451 aa23.17■■□□□ 1.3
HTATSF1-203ENST00000448450 SSU72Q9NP77 194 aaKnown RBP23.17■■□□□ 1.3
HTATSF1-203ENST00000448450 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23.17■■□□□ 1.3
HTATSF1-203ENST00000448450 HPF1Q9NWY4 346 aa23.17■■□□□ 1.3
HTATSF1-203ENST00000448450 SIRT5Q9NXA8 310 aa23.17■■□□□ 1.3
HTATSF1-203ENST00000448450 UTS2RQ9UKP6 389 aa23.17■■□□□ 1.3
HTATSF1-203ENST00000448450 CCL27Q9Y4X3 112 aa23.17■■□□□ 1.3
HTATSF1-203ENST00000448450 DNAJC15Q9Y5T4 150 aa23.17■■□□□ 1.3
HTATSF1-203ENST00000448450 ZNF780BQ9Y6R6 833 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms