RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 WBP11Q9Y2W2 641 aaKnown RBP15.22■□□□□ 0.03
SF3A1-204ENST00000447376 KLF13Q9Y2Y9 288 aaPredicted RBP15.22■□□□□ 0.03
SF3A1-204ENST00000447376 GCN1Q92616 2671 aaKnown RBP15.22■□□□□ 0.03
SF3A1-204ENST00000447376 OR6C76A6NM76 312 aa15.21■□□□□ 0.03
SF3A1-204ENST00000447376 NPIPB8E9PQR5 432 aa15.21■□□□□ 0.03
SF3A1-204ENST00000447376 WWP2O00308 870 aa15.21■□□□□ 0.03
SF3A1-204ENST00000447376 KLF11O14901 512 aa15.21■□□□□ 0.03
SF3A1-204ENST00000447376 PIP5K1BO14986 540 aa15.21■□□□□ 0.03
SF3A1-204ENST00000447376 MAN1A2O60476 641 aa15.21■□□□□ 0.03
SF3A1-204ENST00000447376 OR2J2O76002 312 aa15.21■□□□□ 0.03
SF3A1-204ENST00000447376 SP1P08047 785 aa15.21■□□□□ 0.03
SF3A1-204ENST00000447376 IL3P08700 152 aa15.21■□□□□ 0.03
SF3A1-204ENST00000447376 CPMP14384 443 aa15.21■□□□□ 0.03
SF3A1-204ENST00000447376 ARRB2P32121 409 aa15.21■□□□□ 0.03
SF3A1-204ENST00000447376 SPINK14Q6IE38 97 aa15.21■□□□□ 0.03
SF3A1-204ENST00000447376 OPN5Q6U736 354 aa15.21■□□□□ 0.03
SF3A1-204ENST00000447376 LRRC25Q8N386 305 aaPredicted RBP15.21■□□□□ 0.03
SF3A1-204ENST00000447376 ZNF781Q8N8C0 355 aa15.21■□□□□ 0.03
SF3A1-204ENST00000447376 MDS2Q8NDY4 140 aa15.21■□□□□ 0.03
SF3A1-204ENST00000447376 LRRC8CQ8TDW0 803 aa15.21■□□□□ 0.03
SF3A1-204ENST00000447376 ZNF721Q8TF20 911 aa15.21■□□□□ 0.03
SF3A1-204ENST00000447376 PPP3R2Q96LZ3 170 aa15.21■□□□□ 0.03
SF3A1-204ENST00000447376 SIGLEC12Q96PQ1 595 aa15.21■□□□□ 0.03
SF3A1-204ENST00000447376 GAL3ST4Q96RP7 486 aa15.21■□□□□ 0.03
SF3A1-204ENST00000447376 EBPLQ9BY08 206 aa15.21■□□□□ 0.03
SF3A1-204ENST00000447376 TIMMDC1Q9NPL8 285 aa15.21■□□□□ 0.03
SF3A1-204ENST00000447376 MIEF1Q9NQG6 463 aa15.21■□□□□ 0.03
SF3A1-204ENST00000447376 HAO1Q9UJM8 370 aa15.21■□□□□ 0.03
SF3A1-204ENST00000447376 ZNF223Q9UK11 482 aaPredicted RBP15.21■□□□□ 0.03
SF3A1-204ENST00000447376 UTS2RQ9UKP6 389 aa15.21■□□□□ 0.03
SF3A1-204ENST00000447376 TMED5Q9Y3A6 229 aa15.21■□□□□ 0.03
SF3A1-204ENST00000447376 ANKUB1A6NFN9 424 aa15.2■□□□□ 0.02
SF3A1-204ENST00000447376 TCP11X1B4DZS4 312 aa15.2■□□□□ 0.02
SF3A1-204ENST00000447376 KLRC4-KLRK1H3BQV0 150 aa15.2■□□□□ 0.02
SF3A1-204ENST00000447376 EDN3P14138 238 aa15.2■□□□□ 0.02
SF3A1-204ENST00000447376 GNLYP22749 145 aa15.2■□□□□ 0.02
SF3A1-204ENST00000447376 MAPK1P28482 360 aa15.2■□□□□ 0.02
SF3A1-204ENST00000447376 HK2P52789 917 aa15.2■□□□□ 0.02
SF3A1-204ENST00000447376 CES4AQ5XG92 561 aa15.2■□□□□ 0.02
SF3A1-204ENST00000447376 FAM219BQ5XKK7 198 aa15.2■□□□□ 0.02
SF3A1-204ENST00000447376 ARFGAP2Q8N6H7 521 aa15.2■□□□□ 0.02
SF3A1-204ENST00000447376 NUBPLQ8TB37 319 aa15.2■□□□□ 0.02
SF3A1-204ENST00000447376 C16orf78Q8WTQ4 265 aa15.2■□□□□ 0.02
SF3A1-204ENST00000447376 ZNF75CPQ92670 426 aaPredicted RBP15.2■□□□□ 0.02
SF3A1-204ENST00000447376 BRINP2Q9C0B6 783 aa15.2■□□□□ 0.02
SF3A1-204ENST00000447376 TUBB1Q9H4B7 451 aa15.2■□□□□ 0.02
SF3A1-204ENST00000447376 ZNF395Q9H8N7 513 aaPredicted RBP15.2■□□□□ 0.02
SF3A1-204ENST00000447376 CXorf21Q9HAI6 301 aa15.2■□□□□ 0.02
SF3A1-204ENST00000447376 CFL2Q9Y281 166 aa15.2■□□□□ 0.02
SF3A1-204ENST00000447376 CNTRLQ7Z7A1 2325 aa15.2■□□□□ 0.02
SF3A1-204ENST00000447376 WASHC1A8K0Z3 465 aa15.19■□□□□ 0.02
SF3A1-204ENST00000447376 SLCO1B7G3V0H7 640 aa15.19■□□□□ 0.02
SF3A1-204ENST00000447376 SNNO75324 88 aaPredicted RBP15.19■□□□□ 0.02
SF3A1-204ENST00000447376 SKAP2O75563 359 aaPredicted RBP15.19■□□□□ 0.02
SF3A1-204ENST00000447376 NEURL1O76050 574 aa15.19■□□□□ 0.02
SF3A1-204ENST00000447376 IGKV3-11P04433 115 aa15.19■□□□□ 0.02
SF3A1-204ENST00000447376 ATP1B1P05026 303 aa15.19■□□□□ 0.02
SF3A1-204ENST00000447376 DDX5P17844 614 aaKnown RBP15.19■□□□□ 0.02
SF3A1-204ENST00000447376 FEN1P39748 380 aaKnown RBP15.19■□□□□ 0.02
SF3A1-204ENST00000447376 ST13P50502 369 aaKnown RBP15.19■□□□□ 0.02
SF3A1-204ENST00000447376 RAE1P78406 368 aaKnown RBP15.19■□□□□ 0.02
SF3A1-204ENST00000447376 MPEG1Q2M385 716 aa15.19■□□□□ 0.02
SF3A1-204ENST00000447376 GALNTL6Q49A17 601 aa15.19■□□□□ 0.02
SF3A1-204ENST00000447376 ATP6AP1LQ52LC2 224 aa15.19■□□□□ 0.02
SF3A1-204ENST00000447376 NOXRED1Q6NXP6 359 aa15.19■□□□□ 0.02
SF3A1-204ENST00000447376 IL20RBQ6UXL0 311 aa15.19■□□□□ 0.02
SF3A1-204ENST00000447376 Q6ZSR9 355 aa15.19■□□□□ 0.02
SF3A1-204ENST00000447376 IKBIPQ70UQ0 350 aa15.19■□□□□ 0.02
SF3A1-204ENST00000447376 GALNTL5Q7Z4T8 443 aa15.19■□□□□ 0.02
SF3A1-204ENST00000447376 TAGAPQ8N103 731 aa15.19■□□□□ 0.02
SF3A1-204ENST00000447376 VWA5B2Q8N398 1253 aa15.19■□□□□ 0.02
SF3A1-204ENST00000447376 SLC15A4Q8N697 577 aa15.19■□□□□ 0.02
SF3A1-204ENST00000447376 ZNF321PQ8N8H1 164 aa15.19■□□□□ 0.02
SF3A1-204ENST00000447376 ST6GALNAC3Q8NDV1 305 aa15.19■□□□□ 0.02
SF3A1-204ENST00000447376 OR7G1Q8NGA0 311 aa15.19■□□□□ 0.02
SF3A1-204ENST00000447376 C11orf24Q96F05 449 aaPredicted RBP15.19■□□□□ 0.02
SF3A1-204ENST00000447376 SCMH1Q96GD3 660 aa15.19■□□□□ 0.02
SF3A1-204ENST00000447376 RASL10BQ96S79 203 aa15.19■□□□□ 0.02
SF3A1-204ENST00000447376 SORT1Q99523 831 aa15.19■□□□□ 0.02
SF3A1-204ENST00000447376 C20orf27Q9GZN8 174 aa15.19■□□□□ 0.02
SF3A1-204ENST00000447376 TRIM45Q9H8W5 580 aaPredicted RBP15.19■□□□□ 0.02
SF3A1-204ENST00000447376 LIN28AQ9H9Z2 209 aaKnown RBP15.19■□□□□ 0.02
SF3A1-204ENST00000447376 EHD3Q9NZN3 535 aa15.19■□□□□ 0.02
SF3A1-204ENST00000447376 CCL27Q9Y4X3 112 aa15.19■□□□□ 0.02
SF3A1-204ENST00000447376 POLR3HQ9Y535 204 aaPredicted RBP15.19■□□□□ 0.02
SF3A1-204ENST00000447376 PTGDR2Q9Y5Y4 395 aa15.19■□□□□ 0.02
SF3A1-204ENST00000447376 HELZ2Q9BYK8 2649 aaKnown RBP15.19■□□□□ 0.02
SF3A1-204ENST00000447376 C2orf92A0A1B0GVN3 265 aa15.18■□□□□ 0.02
SF3A1-204ENST00000447376 DYNC1I1O14576 645 aa15.18■□□□□ 0.02
SF3A1-204ENST00000447376 LSM1O15116 133 aaKnown RBP15.18■□□□□ 0.02
SF3A1-204ENST00000447376 PRKNO60260 465 aaPredicted RBP15.18■□□□□ 0.02
SF3A1-204ENST00000447376 NME2P1O60361 137 aa15.18■□□□□ 0.02
SF3A1-204ENST00000447376 BCAS2O75934 225 aaPredicted RBP15.18■□□□□ 0.02
SF3A1-204ENST00000447376 NME2P22392 152 aa15.18■□□□□ 0.02
SF3A1-204ENST00000447376 MPIP34949 423 aa15.18■□□□□ 0.02
SF3A1-204ENST00000447376 NRG3P56975 720 aa15.18■□□□□ 0.02
SF3A1-204ENST00000447376 RPL38P63173 70 aaKnown RBP15.18■□□□□ 0.02
SF3A1-204ENST00000447376 SRSF11Q05519 484 aaKnown RBP15.18■□□□□ 0.02
SF3A1-204ENST00000447376 RBPJQ06330 500 aa15.18■□□□□ 0.02
SF3A1-204ENST00000447376 C2orf80Q0P641 193 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms