RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 CISD2Q8N5K1 135 aaKnown RBP11.07□□□□□ -0.64
RFC4-208ENST00000447345 SUN3Q8TAQ9 357 aa11.07□□□□□ -0.64
RFC4-208ENST00000447345 FAM76AQ8TAV0 307 aa11.07□□□□□ -0.64
RFC4-208ENST00000447345 CPT1CQ8TCG5 803 aa11.07□□□□□ -0.64
RFC4-208ENST00000447345 HAS2Q92819 552 aa11.07□□□□□ -0.64
RFC4-208ENST00000447345 TUBGCP3Q96CW5 907 aa11.07□□□□□ -0.64
RFC4-208ENST00000447345 EGLN2Q96KS0 407 aa11.07□□□□□ -0.64
RFC4-208ENST00000447345 PPP3R2Q96LZ3 170 aa11.07□□□□□ -0.64
RFC4-208ENST00000447345 SH3GL2Q99962 352 aa11.07□□□□□ -0.64
RFC4-208ENST00000447345 RNF32Q9H0A6 362 aa11.07□□□□□ -0.64
RFC4-208ENST00000447345 VIPAS39Q9H9C1 493 aa11.07□□□□□ -0.64
RFC4-208ENST00000447345 CXorf21Q9HAI6 301 aa11.07□□□□□ -0.64
RFC4-208ENST00000447345 GIMAP4Q9NUV9 329 aa11.07□□□□□ -0.64
RFC4-208ENST00000447345 PNPOQ9NVS9 261 aa11.07□□□□□ -0.64
RFC4-208ENST00000447345 SIRT5Q9NXA8 310 aa11.07□□□□□ -0.64
RFC4-208ENST00000447345 MARCOQ9UEW3 520 aaPredicted RBP11.07□□□□□ -0.64
RFC4-208ENST00000447345 BAIAP2L1Q9UHR4 511 aa11.07□□□□□ -0.64
RFC4-208ENST00000447345 PSME2Q9UL46 239 aa11.07□□□□□ -0.64
RFC4-208ENST00000447345 FASNP49327 2511 aaKnown RBP11.06□□□□□ -0.64
RFC4-208ENST00000447345 TRAV17A0A0B4J275 112 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 TMEM200CA6NKL6 621 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 PRAMEF2O60811 474 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 CLPSP04118 112 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 IGKV3-11P04433 115 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 DDCP20711 480 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 GSTM5P46439 218 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 RPL14P50914 215 aaKnown RBP11.06□□□□□ -0.64
RFC4-208ENST00000447345 SSR4P51571 173 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 SLC18A1P54219 525 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 MRPS35P82673 323 aaKnown RBP11.06□□□□□ -0.64
RFC4-208ENST00000447345 PMP22Q01453 160 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 SRSF11Q05519 484 aaKnown RBP11.06□□□□□ -0.64
RFC4-208ENST00000447345 BIKQ13323 160 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 EXOSC7Q15024 291 aaKnown RBP11.06□□□□□ -0.64
RFC4-208ENST00000447345 INPP5JQ15735 1006 aaPredicted RBP11.06□□□□□ -0.64
RFC4-208ENST00000447345 IGFBP7Q16270 282 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 PRSS53Q2L4Q9 553 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 FAM71E1Q6IPT2 247 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 SLC29A4Q7RTT9 530 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 CCDC116Q8IYX3 515 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 VWA5B2Q8N398 1253 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 TMEM156Q8N614 296 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 FNDC5Q8NAU1 212 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 C7orf57Q8NEG2 295 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 OR9A2Q8NGT5 310 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 ASB15Q8WXK1 588 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 FCRL1Q96LA6 429 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 ZNF681Q96N22 645 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 BBS4Q96RK4 519 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 CCT7Q99832 543 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 NUF2Q9BZD4 464 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 SLC35C2Q9NQQ7 365 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.06□□□□□ -0.64
RFC4-208ENST00000447345 MAT2BQ9NZL9 334 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 LRFN1Q9P244 771 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 MYOTQ9UBF9 498 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 BCAP29Q9UHQ4 241 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 NTNG1Q9Y2I2 539 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 TENM4Q6N022 2769 aa11.06□□□□□ -0.64
RFC4-208ENST00000447345 HELZ2Q9BYK8 2649 aaKnown RBP11.05□□□□□ -0.64
RFC4-208ENST00000447345 ZGRF1Q86YA3 2104 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 HMGB1P1B2RPK0 211 aaPredicted RBP11.05□□□□□ -0.64
RFC4-208ENST00000447345 NPIPB8E9PQR5 432 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 ATP1B1P05026 303 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 KITP10721 976 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 PCSK2P16519 638 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 MAPK1P28482 360 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 GALNSP34059 522 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 SOX3P41225 446 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 CYB561P49447 251 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 SLC37A1P57057 533 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 PTGR1Q14914 329 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 EBPQ15125 230 aaKnown RBP11.05□□□□□ -0.64
RFC4-208ENST00000447345 NNATQ16517 81 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 PRICKLE4Q2TBC4 344 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 ZNF766Q5HY98 468 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 C6orf136Q5SQH8 315 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 ATG16L1Q676U5 607 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 IKBIPQ70UQ0 350 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 TRIM42Q8IWZ5 723 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 CYP4Z2PQ8N1L4 340 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 LIX1Q8N485 282 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 MDS2Q8NDY4 140 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 SIMC1Q8NDZ2 872 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 OR5L2Q8NGL0 311 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.05□□□□□ -0.64
RFC4-208ENST00000447345 KAT2AQ92830 837 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 SNRNP40Q96DI7 357 aaKnown RBP11.05□□□□□ -0.64
RFC4-208ENST00000447345 METTL2AQ96IZ6 378 aaKnown RBP11.05□□□□□ -0.64
RFC4-208ENST00000447345 C5orf34Q96MH7 638 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 RASL10BQ96S79 203 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 WWTR1Q9GZV5 400 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 MANSC1Q9H8J5 431 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 ANKRA2Q9H9E1 313 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 ASF1BQ9NVP2 202 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 ZNF446Q9NWS9 450 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 EXO1Q9UQ84 846 aaKnown RBP11.05□□□□□ -0.64
RFC4-208ENST00000447345 ERVK-11Q9UQG0 969 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 TMED5Q9Y3A6 229 aa11.05□□□□□ -0.64
RFC4-208ENST00000447345 MYO18BQ8IUG5 2567 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms