RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 ZNF324BQ6AW86 544 aaPredicted RBP13.74□□□□□ -0.21
HDAC4-204ENST00000446876 IL20RBQ6UXL0 311 aa13.74□□□□□ -0.21
HDAC4-204ENST00000446876 Q6ZSR9 355 aa13.74□□□□□ -0.21
HDAC4-204ENST00000446876 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.74□□□□□ -0.21
HDAC4-204ENST00000446876 CROCCP2Q86T23 111 aa13.74□□□□□ -0.21
HDAC4-204ENST00000446876 DDIASQ8IXT1 998 aa13.74□□□□□ -0.21
HDAC4-204ENST00000446876 HORMAD2Q8N7B1 307 aa13.74□□□□□ -0.21
HDAC4-204ENST00000446876 ANKRD42Q8N9B4 389 aa13.74□□□□□ -0.21
HDAC4-204ENST00000446876 TMEM178AQ8NBL3 297 aa13.74□□□□□ -0.21
HDAC4-204ENST00000446876 SIMC1Q8NDZ2 872 aa13.74□□□□□ -0.21
HDAC4-204ENST00000446876 PPP1R14CQ8TAE6 165 aa13.74□□□□□ -0.21
HDAC4-204ENST00000446876 ZNF681Q96N22 645 aa13.74□□□□□ -0.21
HDAC4-204ENST00000446876 SLX1AQ9BQ83 275 aa13.74□□□□□ -0.21
HDAC4-204ENST00000446876 BRINP2Q9C0B6 783 aa13.74□□□□□ -0.21
HDAC4-204ENST00000446876 TSPAN10Q9H1Z9 355 aaPredicted RBP13.74□□□□□ -0.21
HDAC4-204ENST00000446876 LRTM1Q9HBL6 345 aa13.74□□□□□ -0.21
HDAC4-204ENST00000446876 EML4Q9HC35 981 aaKnown RBP13.74□□□□□ -0.21
HDAC4-204ENST00000446876 PFDN4Q9NQP4 134 aa13.74□□□□□ -0.21
HDAC4-204ENST00000446876 ZDHHC2Q9UIJ5 367 aa13.74□□□□□ -0.21
HDAC4-204ENST00000446876 ERVK-11Q9UQG0 969 aa13.74□□□□□ -0.21
HDAC4-204ENST00000446876 RP1L1Q8IWN7 2480 aaPredicted RBP13.74□□□□□ -0.21
HDAC4-204ENST00000446876 EXPH5Q8NEV8 1989 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 GOLGA6L10A6NI86 522 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 A8MVJ9 347 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 SLC28A1O00337 649 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 TM9SF1O15321 606 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 RGS14O43566 566 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 SKAP2O75563 359 aaPredicted RBP13.73□□□□□ -0.21
HDAC4-204ENST00000446876 NADKO95544 446 aaPredicted RBP13.73□□□□□ -0.21
HDAC4-204ENST00000446876 CHEK2O96017 543 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 FGF4P08620 206 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 DHRS4L1P0CG22 281 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 CSNK2A2P19784 350 aaPredicted RBP13.73□□□□□ -0.21
HDAC4-204ENST00000446876 TACR1P25103 407 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 SOX18P35713 384 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 RFC3P40938 356 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 TDGF1P3P51864 188 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 GPR85P60893 370 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 RPL38P63173 70 aaKnown RBP13.73□□□□□ -0.21
HDAC4-204ENST00000446876 C2orf80Q0P641 193 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 MGAT2Q10469 447 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 DUSP8Q13202 625 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 CASP8Q14790 479 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 EXOSC7Q15024 291 aaKnown RBP13.73□□□□□ -0.21
HDAC4-204ENST00000446876 KIAA0040Q15053 153 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 EBPQ15125 230 aaKnown RBP13.73□□□□□ -0.21
HDAC4-204ENST00000446876 PRICKLE4Q2TBC4 344 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 GALNTL6Q49A17 601 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 NOXRED1Q6NXP6 359 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 SLC29A4Q7RTT9 530 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 CLYBLQ8N0X4 340 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 LRRC25Q8N386 305 aaPredicted RBP13.73□□□□□ -0.21
HDAC4-204ENST00000446876 CPSF7Q8N684 471 aaKnown RBP13.73□□□□□ -0.21
HDAC4-204ENST00000446876 OR5L2Q8NGL0 311 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 NUBPLQ8TB37 319 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 PRR7Q8TB68 274 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 NR4A3Q92570 626 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 TMEM125Q96AQ2 219 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 FRMD6Q96NE9 622 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 WWTR1Q9GZV5 400 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 TMBIM4Q9HC24 238 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 HPF1Q9NWY4 346 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 C1orf109Q9NX04 203 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 MAT2BQ9NZL9 334 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 PCDHGB6Q9Y5F9 930 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 ACTL7BQ9Y614 415 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 ZNF780BQ9Y6R6 833 aa13.73□□□□□ -0.21
HDAC4-204ENST00000446876 A0A0G2JMM0 328 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 A0A1W2PPB8 328 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 A0A1W2PRS3 328 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 KIR3DP1A8MWS1 328 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 G3V3Y1 287 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 ZWINTO95229 277 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 HSPA4LO95757 839 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 ATP1B1P05026 303 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 SERPINE1P05121 402 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 DRD2P14416 443 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 S1PR1P21453 382 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 BGNP21810 368 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 PRPH2P23942 346 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 SERPINB5P36952 375 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 MEOX1P50221 254 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 KCNK10P57789 538 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 MRPS35P82673 323 aaKnown RBP13.72□□□□□ -0.21
HDAC4-204ENST00000446876 FUT7Q11130 342 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 HEPACAMQ14CZ8 416 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 PIGGQ5H8A4 983 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 C6orf163Q5TEZ5 329 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 FAM71E1Q6IPT2 247 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 TMEM64Q6YI46 380 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 TICAM1Q8IUC6 712 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 CCDC116Q8IYX3 515 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 VWA5B2Q8N398 1253 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 ZNF615Q8N8J6 731 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 ST6GALNAC3Q8NDV1 305 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 OR9A2Q8NGT5 310 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 CLHC1Q8NHS4 586 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.72□□□□□ -0.21
HDAC4-204ENST00000446876 MGARPQ8TDB4 240 aa13.72□□□□□ -0.21
HDAC4-204ENST00000446876 GFM2Q969S9 779 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms