RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 XAF1Q6GPH4 301 aa16.44■□□□□ 0.22
SMC6-206ENST00000446852 SHISA5Q8N114 240 aa16.44■□□□□ 0.22
SMC6-206ENST00000446852 C16orf58Q96GQ5 468 aa16.44■□□□□ 0.22
SMC6-206ENST00000446852 CSF3RQ99062 836 aa16.44■□□□□ 0.22
SMC6-206ENST00000446852 PITX2Q99697 317 aa16.44■□□□□ 0.22
SMC6-206ENST00000446852 WFDC6Q9BQY6 131 aa16.44■□□□□ 0.22
SMC6-206ENST00000446852 XPNPEP2O43895 674 aa16.44■□□□□ 0.22
SMC6-206ENST00000446852 ABCB7O75027 752 aa16.44■□□□□ 0.22
SMC6-206ENST00000446852 PDE9AO76083 593 aa16.44■□□□□ 0.22
SMC6-206ENST00000446852 NR2F1P10589 423 aa16.44■□□□□ 0.22
SMC6-206ENST00000446852 RHCEP18577 417 aa16.44■□□□□ 0.22
SMC6-206ENST00000446852 MPIP34949 423 aa16.44■□□□□ 0.22
SMC6-206ENST00000446852 GABARAPL2P60520 117 aa16.44■□□□□ 0.22
SMC6-206ENST00000446852 SUZ12Q15022 739 aaKnown RBP16.44■□□□□ 0.22
SMC6-206ENST00000446852 COMTD1Q86VU5 262 aa16.44■□□□□ 0.22
SMC6-206ENST00000446852 FAM46DQ8NEK8 389 aa16.44■□□□□ 0.22
SMC6-206ENST00000446852 BPIFB6Q8NFQ5 453 aa16.44■□□□□ 0.22
SMC6-206ENST00000446852 OR9Q2Q8NGE9 314 aa16.44■□□□□ 0.22
SMC6-206ENST00000446852 RSC1A1Q92681 617 aa16.44■□□□□ 0.22
SMC6-206ENST00000446852 SERINC2Q96SA4 455 aa16.44■□□□□ 0.22
SMC6-206ENST00000446852 NIPSNAP1Q9BPW8 284 aa16.44■□□□□ 0.22
SMC6-206ENST00000446852 FOXQ1Q9C009 403 aa16.44■□□□□ 0.22
SMC6-206ENST00000446852 SLC24A3Q9HC58 644 aa16.44■□□□□ 0.22
SMC6-206ENST00000446852 GIMAP4Q9NUV9 329 aa16.44■□□□□ 0.22
SMC6-206ENST00000446852 FAM32AQ9Y421 112 aaKnown RBP16.44■□□□□ 0.22
SMC6-206ENST00000446852 GPC6Q9Y625 555 aaPredicted RBP16.44■□□□□ 0.22
SMC6-206ENST00000446852 ZNF780BQ9Y6R6 833 aa16.44■□□□□ 0.22
SMC6-206ENST00000446852 A0A0J9YY10 115 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 KRBA1A5PL33 1030 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 ZNF217O75362 1048 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 WNT1P04628 370 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 JUNDP17535 347 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 NUDT1P36639 197 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 KCNJ5P48544 419 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 RPS6KA3P51812 740 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 HMGA2P52926 109 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 RPP38P78345 283 aaKnown RBP16.43■□□□□ 0.22
SMC6-206ENST00000446852 OLR1P78380 273 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 HHEXQ03014 270 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 LSAMPQ13449 338 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 GPR153Q6NV75 609 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 Q6ZPB1 254 aaPredicted RBP16.43■□□□□ 0.22
SMC6-206ENST00000446852 PRSS41Q7RTY9 318 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 B3GNT8Q7Z7M8 397 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 CLVS1Q8IUQ0 354 aaPredicted RBP16.43■□□□□ 0.22
SMC6-206ENST00000446852 SPARTQ8N0X7 666 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 CAMKVQ8NCB2 501 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 OR56A1Q8NGH5 318 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 OR4D11Q8NGI4 311 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 ZDHHC1Q8WTX9 485 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 ZNF566Q969W8 418 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 ELP4Q96EB1 424 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 ZNF607Q96SK3 696 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 CXorf21Q9HAI6 301 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 SEC14L3Q9UDX4 400 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 KCND3Q9UK17 655 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 CDC14AQ9UNH5 594 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 KCNE3Q9Y6H6 103 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 MYO15AQ9UKN7 3530 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 TMEM131Q92545 1883 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 TMEM247A6NEH6 219 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 ZNF860A6NHJ4 632 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 B4DGG1 531 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 NDUFS2O75306 463 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 NME6O75414 186 aaPredicted RBP16.43■□□□□ 0.22
SMC6-206ENST00000446852 GADD45GO95257 159 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 ANGPTL1O95841 491 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 EIF2S1P05198 315 aaKnown RBP16.43■□□□□ 0.22
SMC6-206ENST00000446852 CHRM4P08173 479 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 CPN2P22792 545 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 FMO3P31513 532 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 BUD31P41223 144 aaPredicted RBP16.43■□□□□ 0.22
SMC6-206ENST00000446852 RNF44Q7L0R7 432 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 RBM45Q8IUH3 476 aaKnown RBP16.43■□□□□ 0.22
SMC6-206ENST00000446852 TMEFF1Q8IYR6 380 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 PROX1Q92786 737 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 KAT2AQ92830 837 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 UBE2FQ969M7 185 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 THAP11Q96EK4 314 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 MPP4Q96JB8 637 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 APOL4Q9BPW4 351 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 ROGDIQ9GZN7 287 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 FANCEQ9HB96 536 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 BLOC1S6Q9UL45 172 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 DAPP1Q9UN19 280 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 HSPE1-MOB4S4R3N1 261 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 ABCA7Q8IZY2 2146 aa16.43■□□□□ 0.22
SMC6-206ENST00000446852 OR5K3A6NET4 321 aa16.42■□□□□ 0.22
SMC6-206ENST00000446852 EMC8O43402 210 aa16.42■□□□□ 0.22
SMC6-206ENST00000446852 HCRTR1O43613 425 aa16.42■□□□□ 0.22
SMC6-206ENST00000446852 CCDC159P0C7I6 412 aa16.42■□□□□ 0.22
SMC6-206ENST00000446852 TYRP1P17643 537 aa16.42■□□□□ 0.22
SMC6-206ENST00000446852 RELAQ04206 551 aa16.42■□□□□ 0.22
SMC6-206ENST00000446852 FOXD4Q12950 439 aaPredicted RBP16.42■□□□□ 0.22
SMC6-206ENST00000446852 TOP3AQ13472 1001 aaPredicted RBP16.42■□□□□ 0.22
SMC6-206ENST00000446852 BHLHB9Q6PI77 547 aa16.42■□□□□ 0.22
SMC6-206ENST00000446852 HMGN2P46Q86SG4 172 aa16.42■□□□□ 0.22
SMC6-206ENST00000446852 TSPYL5Q86VY4 417 aaPredicted RBP16.42■□□□□ 0.22
SMC6-206ENST00000446852 LACC1Q8IV20 430 aa16.42■□□□□ 0.22
SMC6-206ENST00000446852 MIPOL1Q8TD10 442 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms