RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 RNPEPL1Q9HAU8 725 aa3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 DDX19AQ9NUU7 478 aaKnown RBP3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 CTSZQ9UBR2 303 aa3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 CTNNA3Q9UI47 895 aa3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 ZHX2Q9Y6X8 837 aa3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 AHDC1Q5TGY3 1603 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 DISP2A7MBM2 1401 aa3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 MAP3K15Q6ZN16 1313 aa3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 MYH3P11055 1940 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 MYH7P12883 1935 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 TCHHQ07283 1943 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 ITGB4P16144 1822 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 FAM149AA5PLN7 773 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 TRAFD1O14545 582 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 SYT7O43581 403 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 PFKFB2O60825 505 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 TPM3P06753 285 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 TPM2P07951 284 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 CCDC192P0DO97 292 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 KRT5P13647 590 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 PRELPP51888 382 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 NME5P56597 212 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 FKBP3Q00688 224 aaKnown RBP3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 SGCBQ16585 318 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 UPP1Q16831 310 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 IMMTQ16891 758 aaKnown RBP3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 MS4A18Q3C1V0 323 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 FUT11Q495W5 492 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 AARDQ4LEZ3 155 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 ATL3Q6DD88 541 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 PAQR6Q6TCH4 344 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 TMEM64Q6YI46 380 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 MYPOPQ86VE0 399 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 NLRP14Q86W24 1093 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 CACUL1Q86Y37 369 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 OR4N5Q8IXE1 308 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 Q8N377 158 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 NECAB1Q8N987 351 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 C8orf46Q8TAG6 207 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 BCL2L2Q92843 193 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 ZNF396Q96N95 335 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 ERGIC2Q96RQ1 377 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 ZNF665Q9H7R5 613 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 VIPAS39Q9H9C1 493 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 UBQLN2Q9UHD9 624 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 KLK13Q9UKR3 277 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 CFAP45Q9UL16 551 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 ITM2BQ9Y287 266 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 COL22A1Q8NFW1 1626 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 BCL9O00512 1426 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 RIC1Q4ADV7 1423 aa3.68□□□□□ -1.82
HMGB3P6-201ENST00000444896 LRP5O75197 1615 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 IQCMA0A1B0GVH7 501 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 C5orf51A6NDU8 294 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 ERI2A8K979 691 aaKnown RBP3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 ARHGEF33A8MVX0 844 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 A8MXK9 166 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 ERVV-1B6SEH8 477 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 E7EWF7 191 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 K7EQG2 157 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 INPP4BO15327 924 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 GOSR1O95249 250 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 UQCRFS1P1P0C7P4 283 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 HSPD1P10809 573 aaKnown RBP3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 PKLRP30613 574 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 ETV5P41161 510 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 MFGE8Q08431 387 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 CD300CQ08708 224 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 TRDNQ13061 729 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 MORF4L2Q15014 288 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 SPHARQ15513 63 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 KNOP1Q1ED39 458 aaKnown RBP3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 PARP10Q53GL7 1025 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 TEX35Q5T0J7 233 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 LYPLAL1Q5VWZ2 237 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 CCDC73Q6ZRK6 1079 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 CYP4V2Q6ZWL3 525 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 PRSS42Q7Z5A4 293 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 GTSCR1Q86UQ5 136 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 CARM1Q86X55 608 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 TMEM126BQ8IUX1 230 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 THEM5Q8N1Q8 247 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 ABHD12Q8N2K0 398 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 FBXL16Q8N461 479 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 RNASE8Q8TDE3 154 aaKnown RBP3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 CHPT1Q8WUD6 406 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 LIPHQ8WWY8 451 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 NABP1Q96AH0 204 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 ZNF274Q96GC6 653 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 TCEANC2Q96MN5 208 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 CCDC28BQ9BUN5 200 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 NTMT1Q9BV86 223 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 PINK1Q9BXM7 581 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 SLC5A7Q9GZV3 580 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 TNMDQ9H2S6 317 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 GPN1Q9HCN4 374 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 NAP1L2Q9ULW6 460 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 ROBO1Q9Y6N7 1651 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 ATRNO75882 1429 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms