RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 SCELO95171 688 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 OR5F1O95221 314 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 ATE1O95260 518 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 ZNF888P0CJ79 500 aaPredicted RBP7.64□□□□□ -1.19
CCDC39-201ENST00000442201 EFNA1P20827 205 aaPredicted RBP7.64□□□□□ -1.19
CCDC39-201ENST00000442201 PTPN6P29350 595 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 CDKN2CP42773 168 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 ATXN3P54252 364 aaPredicted RBP7.64□□□□□ -1.19
CCDC39-201ENST00000442201 OR1D5P58170 312 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 GPLD1P80108 840 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 TXNL4AP83876 142 aaKnown RBP7.64□□□□□ -1.19
CCDC39-201ENST00000442201 LPAL2Q16609 132 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 MRM1Q6IN84 353 aaKnown RBP7.64□□□□□ -1.19
CCDC39-201ENST00000442201 ABHD13Q7L211 337 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 CHERPQ8IWX8 916 aaKnown RBP7.64□□□□□ -1.19
CCDC39-201ENST00000442201 ADGRG5Q8IZF4 528 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 MMP21Q8N119 569 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 CSNK1A1LQ8N752 337 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 OR4C6Q8NH72 309 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 ZCCHC10Q8TBK6 192 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 CNDP2Q96KP4 475 aaKnown RBP7.64□□□□□ -1.19
CCDC39-201ENST00000442201 TM9SF2Q99805 663 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 GON7Q9BXV9 100 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 DIABLOQ9NR28 239 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 SLC6A13Q9NSD5 602 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 TEX10Q9NXF1 929 aaPredicted RBP7.64□□□□□ -1.19
CCDC39-201ENST00000442201 CNOT11Q9UKZ1 510 aaKnown RBP7.64□□□□□ -1.19
CCDC39-201ENST00000442201 NEUROG3Q9Y4Z2 214 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 MAU2Q9Y6X3 613 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 EVPLLA8MZ36 301 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 H3BUI4 141 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 CCRL2O00421 344 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 TXNDC9O14530 226 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 EPN2O95208 641 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 CER1O95813 267 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 SYPP08247 313 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 ALOX12P18054 663 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 NR4A1P22736 598 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 CERS1P27544 350 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 GFERP55789 205 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 VSX2P58304 361 aaPredicted RBP7.64□□□□□ -1.19
CCDC39-201ENST00000442201 SELPLGQ14242 412 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 NKAIN2Q5VXU1 208 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 SLC23A3Q6PIS1 610 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 CORO6Q6QEF8 472 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 DHFR2Q86XF0 187 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 PLXDC1Q8IUK5 500 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 MCATQ8IVS2 390 aaKnown RBP7.64□□□□□ -1.19
CCDC39-201ENST00000442201 ARL6IP6Q8N6S5 226 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 ASCC1Q8N9N2 400 aaKnown RBP7.64□□□□□ -1.19
CCDC39-201ENST00000442201 FAM47BQ8NA70 645 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 CATSPER1Q8NEC5 780 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 BHLHE22Q8NFJ8 381 aaPredicted RBP7.64□□□□□ -1.19
CCDC39-201ENST00000442201 OR6C4Q8NGE1 309 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 TRIM63Q969Q1 353 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 AURKBQ96GD4 344 aaPredicted RBP7.64□□□□□ -1.19
CCDC39-201ENST00000442201 ZNF764Q96H86 408 aaPredicted RBP7.64□□□□□ -1.19
CCDC39-201ENST00000442201 SOHLH2Q9NX45 425 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 LYARQ9NX58 379 aaKnown RBP7.64□□□□□ -1.19
CCDC39-201ENST00000442201 EHD3Q9NZN3 535 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 GMPR2Q9P2T1 348 aaKnown RBP7.64□□□□□ -1.19
CCDC39-201ENST00000442201 DAPK2Q9UIK4 370 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 HEATR5BQ9P2D3 2071 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 CACNA1EQ15878 2313 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 A0A1W2PRB8 838 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 H0YJX3 145 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 H3BNH8 94 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 SRPX2O60687 465 aaPredicted RBP7.63□□□□□ -1.19
CCDC39-201ENST00000442201 GMNNO75496 209 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 SMIM10L1P0DMW3 83 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 RRM2P31350 389 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 S100A12P80511 92 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 MPEG1Q2M385 716 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 DEFB110Q30KQ9 67 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 AMZ1Q400G9 498 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 DEFB134Q4QY38 66 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 OR4A15Q8NGL6 344 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 PMEPA1Q969W9 287 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 SMIM10Q96HG1 83 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 SERINC2Q96SA4 455 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 CPPED1Q9BRF8 314 aaPredicted RBP7.63□□□□□ -1.19
CCDC39-201ENST00000442201 MUC13Q9H3R2 512 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 PIF1Q9H611 641 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 EGFL7Q9UHF1 273 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 GMEB2Q9UKD1 530 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 FBXW2Q9UKT8 454 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 VPS4AQ9UN37 437 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 ASB4Q9Y574 426 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 H3BMQ9 156 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 CLIC1O00299 241 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 B4GAT1O43505 415 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 MYF5P13349 255 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 HOXB9P17482 250 aaPredicted RBP7.63□□□□□ -1.19
CCDC39-201ENST00000442201 HTR1EP28566 365 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 MLLT3P42568 568 aaPredicted RBP7.63□□□□□ -1.19
CCDC39-201ENST00000442201 NR0B2Q15466 257 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 TRIP10Q15642 601 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 LINC00299Q6ZSB3 139 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 CARFQ8N187 725 aa7.63□□□□□ -1.19
CCDC39-201ENST00000442201 DNAJC22Q8N4W6 341 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 191.5 ms