RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 ACTRT2Q8TDY3 377 aa16.47■□□□□ 0.23
CCDC188-201ENST00000439765 THAP3Q8WTV1 239 aaPredicted RBP16.47■□□□□ 0.23
CCDC188-201ENST00000439765 PTPMT1Q8WUK0 201 aaPredicted RBP16.47■□□□□ 0.23
CCDC188-201ENST00000439765 C10orf82Q8WW14 230 aa16.47■□□□□ 0.23
CCDC188-201ENST00000439765 DAZLQ92904 295 aaKnown RBP16.47■□□□□ 0.23
CCDC188-201ENST00000439765 TUBGCP3Q96CW5 907 aa16.47■□□□□ 0.23
CCDC188-201ENST00000439765 VMP1Q96GC9 406 aa16.47■□□□□ 0.23
CCDC188-201ENST00000439765 LMF1Q96S06 567 aa16.47■□□□□ 0.23
CCDC188-201ENST00000439765 OR8D2Q9GZM6 311 aa16.47■□□□□ 0.23
CCDC188-201ENST00000439765 AKTIPQ9H8T0 292 aa16.47■□□□□ 0.23
CCDC188-201ENST00000439765 ZNF223Q9UK11 482 aaPredicted RBP16.47■□□□□ 0.23
CCDC188-201ENST00000439765 LSM1O15116 133 aaKnown RBP16.46■□□□□ 0.23
CCDC188-201ENST00000439765 RSL1D1O76021 490 aaKnown RBP16.46■□□□□ 0.23
CCDC188-201ENST00000439765 GP1BBP13224 206 aa16.46■□□□□ 0.23
CCDC188-201ENST00000439765 COX7A2P14406 83 aa16.46■□□□□ 0.23
CCDC188-201ENST00000439765 TIA1P31483 386 aaKnown RBP eCLIP16.46■□□□□ 0.23
CCDC188-201ENST00000439765 STT3AP46977 705 aa16.46■□□□□ 0.23
CCDC188-201ENST00000439765 ALDH9A1P49189 494 aa16.46■□□□□ 0.23
CCDC188-201ENST00000439765 CLCN2P51788 898 aa16.46■□□□□ 0.23
CCDC188-201ENST00000439765 RAE1P78406 368 aaKnown RBP16.46■□□□□ 0.23
CCDC188-201ENST00000439765 NR6A1Q15406 480 aa16.46■□□□□ 0.23
CCDC188-201ENST00000439765 FHL5Q5TD97 284 aa16.46■□□□□ 0.23
CCDC188-201ENST00000439765 H3F3CQ6NXT2 135 aa16.46■□□□□ 0.23
CCDC188-201ENST00000439765 Q6ZS92 163 aa16.46■□□□□ 0.23
CCDC188-201ENST00000439765 ACAD11Q709F0 780 aa16.46■□□□□ 0.23
CCDC188-201ENST00000439765 ZNF321PQ8N8H1 164 aa16.46■□□□□ 0.23
CCDC188-201ENST00000439765 CATSPER1Q8NEC5 780 aa16.46■□□□□ 0.23
CCDC188-201ENST00000439765 CDC26Q8NHZ8 85 aa16.46■□□□□ 0.23
CCDC188-201ENST00000439765 SLC2A12Q8TD20 617 aa16.46■□□□□ 0.23
CCDC188-201ENST00000439765 DOK4Q8TEW6 326 aa16.46■□□□□ 0.23
CCDC188-201ENST00000439765 PPWD1Q96BP3 646 aaKnown RBP16.46■□□□□ 0.23
CCDC188-201ENST00000439765 PPP3R2Q96LZ3 170 aa16.46■□□□□ 0.23
CCDC188-201ENST00000439765 OR52B2Q96RD2 323 aa16.46■□□□□ 0.23
CCDC188-201ENST00000439765 CCDC28BQ9BUN5 200 aa16.46■□□□□ 0.23
CCDC188-201ENST00000439765 ANKRD10Q9NXR5 420 aa16.46■□□□□ 0.23
CCDC188-201ENST00000439765 STMN3Q9NZ72 180 aa16.46■□□□□ 0.23
CCDC188-201ENST00000439765 MCM8Q9UJA3 840 aa16.46■□□□□ 0.23
CCDC188-201ENST00000439765 OR10H2O60403 315 aa16.45■□□□□ 0.22
CCDC188-201ENST00000439765 PEX11AO75192 247 aa16.45■□□□□ 0.22
CCDC188-201ENST00000439765 GUCY1B2O75343 617 aa16.45■□□□□ 0.22
CCDC188-201ENST00000439765 GPR75O95800 540 aa16.45■□□□□ 0.22
CCDC188-201ENST00000439765 DDAH2O95865 285 aa16.45■□□□□ 0.22
CCDC188-201ENST00000439765 PIK3R1P27986 724 aa16.45■□□□□ 0.22
CCDC188-201ENST00000439765 MEP1AQ16819 746 aa16.45■□□□□ 0.22
CCDC188-201ENST00000439765 LSM12Q3MHD2 195 aaKnown RBP16.45■□□□□ 0.22
CCDC188-201ENST00000439765 C6orf136Q5SQH8 315 aa16.45■□□□□ 0.22
CCDC188-201ENST00000439765 DGAT2L6Q6ZPD8 337 aa16.45■□□□□ 0.22
CCDC188-201ENST00000439765 CEP70Q8NHQ1 597 aa16.45■□□□□ 0.22
CCDC188-201ENST00000439765 BCAS4Q8TDM0 211 aa16.45■□□□□ 0.22
CCDC188-201ENST00000439765 SNRNP40Q96DI7 357 aaKnown RBP16.45■□□□□ 0.22
CCDC188-201ENST00000439765 RBM18Q96H35 190 aaKnown RBP16.45■□□□□ 0.22
CCDC188-201ENST00000439765 METTL2AQ96IZ6 378 aaKnown RBP16.45■□□□□ 0.22
CCDC188-201ENST00000439765 ZNF354BQ96LW1 612 aa16.45■□□□□ 0.22
CCDC188-201ENST00000439765 DEFB126Q9BYW3 111 aa16.45■□□□□ 0.22
CCDC188-201ENST00000439765 CDCP1Q9H5V8 836 aa16.45■□□□□ 0.22
CCDC188-201ENST00000439765 TCF7L2Q9NQB0 619 aa16.45■□□□□ 0.22
CCDC188-201ENST00000439765 C1orf109Q9NX04 203 aa16.45■□□□□ 0.22
CCDC188-201ENST00000439765 GIMAP2Q9UG22 337 aa16.45■□□□□ 0.22
CCDC188-201ENST00000439765 PPIEQ9UNP9 301 aaKnown RBP16.45■□□□□ 0.22
CCDC188-201ENST00000439765 POLR3HQ9Y535 204 aaPredicted RBP16.45■□□□□ 0.22
CCDC188-201ENST00000439765 CACNA1DQ01668 2161 aa16.44■□□□□ 0.22
CCDC188-201ENST00000439765 OR5H15A6NDH6 313 aa16.44■□□□□ 0.22
CCDC188-201ENST00000439765 PRKNO60260 465 aaPredicted RBP16.44■□□□□ 0.22
CCDC188-201ENST00000439765 IL3P08700 152 aa16.44■□□□□ 0.22
CCDC188-201ENST00000439765 GPR143P51810 404 aa16.44■□□□□ 0.22
CCDC188-201ENST00000439765 ZNF169Q14929 603 aaPredicted RBP16.44■□□□□ 0.22
CCDC188-201ENST00000439765 KIAA0040Q15053 153 aa16.44■□□□□ 0.22
CCDC188-201ENST00000439765 TLR1Q15399 786 aa16.44■□□□□ 0.22
CCDC188-201ENST00000439765 SMU1Q2TAY7 513 aa16.44■□□□□ 0.22
CCDC188-201ENST00000439765 GALNTL6Q49A17 601 aa16.44■□□□□ 0.22
CCDC188-201ENST00000439765 ATP6AP1LQ52LC2 224 aa16.44■□□□□ 0.22
CCDC188-201ENST00000439765 NXNQ6DKJ4 435 aa16.44■□□□□ 0.22
CCDC188-201ENST00000439765 FAM180BQ6P0A1 224 aa16.44■□□□□ 0.22
CCDC188-201ENST00000439765 RPS19BP1Q86WX3 136 aaKnown RBP16.44■□□□□ 0.22
CCDC188-201ENST00000439765 ST13P4Q8IZP2 240 aaPredicted RBP16.44■□□□□ 0.22
CCDC188-201ENST00000439765 TM4SF18Q96CE8 201 aa16.44■□□□□ 0.22
CCDC188-201ENST00000439765 C11orf24Q96F05 449 aaPredicted RBP16.44■□□□□ 0.22
CCDC188-201ENST00000439765 RILPQ96NA2 401 aa16.44■□□□□ 0.22
CCDC188-201ENST00000439765 CNPPD1Q9BV87 410 aa16.44■□□□□ 0.22
CCDC188-201ENST00000439765 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.44■□□□□ 0.22
CCDC188-201ENST00000439765 LRTM1Q9HBL6 345 aa16.44■□□□□ 0.22
CCDC188-201ENST00000439765 ABI3Q9P2A4 366 aa16.44■□□□□ 0.22
CCDC188-201ENST00000439765 MAP10Q9P2G4 905 aa16.44■□□□□ 0.22
CCDC188-201ENST00000439765 DLGAP4Q9Y2H0 992 aa16.44■□□□□ 0.22
CCDC188-201ENST00000439765 PCDHA9Q9Y5H5 950 aa16.44■□□□□ 0.22
CCDC188-201ENST00000439765 UNC79Q9P2D8 2635 aa16.43■□□□□ 0.22
CCDC188-201ENST00000439765 C1orf226A1L170 272 aa16.43■□□□□ 0.22
CCDC188-201ENST00000439765 GABRR3A8MPY1 467 aa16.43■□□□□ 0.22
CCDC188-201ENST00000439765 HRKO00198 91 aa16.43■□□□□ 0.22
CCDC188-201ENST00000439765 NDUFAB1O14561 156 aa16.43■□□□□ 0.22
CCDC188-201ENST00000439765 SEC22BO75396 215 aa16.43■□□□□ 0.22
CCDC188-201ENST00000439765 AGFG2O95081 481 aa16.43■□□□□ 0.22
CCDC188-201ENST00000439765 ANXA4P09525 319 aaPredicted RBP16.43■□□□□ 0.22
CCDC188-201ENST00000439765 LBPP18428 481 aa16.43■□□□□ 0.22
CCDC188-201ENST00000439765 TNFSF10P50591 281 aa16.43■□□□□ 0.22
CCDC188-201ENST00000439765 TRA2BP62995 288 aaKnown RBP16.43■□□□□ 0.22
CCDC188-201ENST00000439765 ZNF750Q32MQ0 723 aa16.43■□□□□ 0.22
CCDC188-201ENST00000439765 RFTN2Q52LD8 501 aaPredicted RBP16.43■□□□□ 0.22
CCDC188-201ENST00000439765 GKAP1Q5VSY0 366 aaPredicted RBP16.43■□□□□ 0.22
CCDC188-201ENST00000439765 SLC48A1Q6P1K1 146 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms