RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 TMEM200CA6NKL6 621 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 HRKO00198 91 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 PRKNO60260 465 aaPredicted RBP10.97□□□□□ -0.65
HSPG2-206ENST00000439717 TBX19O60806 448 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 PEX11AO75192 247 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 VPS4BO75351 444 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 ITGA10O75578 1167 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 ATP6AP2O75787 350 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 PRPS2P11908 318 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 BCKDHAP12694 445 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 DDX5P17844 614 aaKnown RBP10.97□□□□□ -0.65
HSPG2-206ENST00000439717 SDC1P18827 310 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 TACR1P25103 407 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 MPIP34949 423 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 CD96P40200 585 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 ASMTP46597 345 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 CYB561P49447 251 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 HLCSP50747 726 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 SSR4P51571 173 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 HK2P52789 917 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 SLC37A1P57057 533 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 FUT7Q11130 342 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 MAD2L1Q13257 205 aaPredicted RBP10.97□□□□□ -0.65
HSPG2-206ENST00000439717 OR1C1Q15619 314 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 PDCD2Q16342 344 aaPredicted RBP10.97□□□□□ -0.65
HSPG2-206ENST00000439717 INAQ16352 499 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 MPEG1Q2M385 716 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 PRICKLE4Q2TBC4 344 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 COLEC12Q5KU26 742 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 C6orf136Q5SQH8 315 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 SLC29A4Q7RTT9 530 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 TICAM1Q8IUC6 712 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 C9orf40Q8IXQ3 194 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 CCDC116Q8IYX3 515 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 LRRC34Q8IZ02 419 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 VWA5B2Q8N398 1253 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 MDS2Q8NDY4 140 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 THAP3Q8WTV1 239 aaPredicted RBP10.97□□□□□ -0.65
HSPG2-206ENST00000439717 EXOSC8Q96B26 276 aaKnown RBP10.97□□□□□ -0.65
HSPG2-206ENST00000439717 TUBGCP3Q96CW5 907 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 ERP27Q96DN0 273 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 ZNF639Q9UID6 485 aa10.97□□□□□ -0.65
HSPG2-206ENST00000439717 EXO1Q9UQ84 846 aaKnown RBP10.97□□□□□ -0.65
HSPG2-206ENST00000439717 UQCRHLA0A096LP55 91 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 MYO1GB0I1T2 1018 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 SLCO1B7G3V0H7 640 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 BCAS2O75934 225 aaPredicted RBP10.96□□□□□ -0.65
HSPG2-206ENST00000439717 OR2J2O76002 312 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 SLITRK5O94991 958 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 F10P00742 488 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 CLPSP04118 112 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 JUNP05412 331 aaKnown RBP10.96□□□□□ -0.65
HSPG2-206ENST00000439717 CT62P0C5K7 136 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 PLA2G2AP14555 144 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 CD46P15529 392 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 S1PR1P21453 382 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 SSTR4P31391 388 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 RPL3P39023 403 aaKnown RBP10.96□□□□□ -0.65
HSPG2-206ENST00000439717 PPP2R2AP63151 447 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 OCRLQ01968 901 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 OC90Q02509 493 aaPredicted RBP10.96□□□□□ -0.65
HSPG2-206ENST00000439717 TLE1Q04724 770 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 EMX2Q04743 252 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 MGAT2Q10469 447 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 INPP5JQ15735 1006 aaPredicted RBP10.96□□□□□ -0.65
HSPG2-206ENST00000439717 PIGGQ5H8A4 983 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 ZNF766Q5HY98 468 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 R3HCC1LQ7Z5L2 792 aaKnown RBP10.96□□□□□ -0.65
HSPG2-206ENST00000439717 TMEM156Q8N614 296 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 SLC15A4Q8N697 577 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 ZNF615Q8N8J6 731 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 FNDC5Q8NAU1 212 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 CPT1CQ8TCG5 803 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 ZNF675Q8TD23 568 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 ZNF75CPQ92670 426 aaPredicted RBP10.96□□□□□ -0.65
HSPG2-206ENST00000439717 TP53INP1Q96A56 240 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 CTHRC1Q96CG8 243 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 MTERF3Q96E29 417 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 EGLN2Q96KS0 407 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 TSSK3Q96PN8 268 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 SIGLEC12Q96PQ1 595 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 BBS4Q96RK4 519 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 BRINP2Q9C0B6 783 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 WWTR1Q9GZV5 400 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 OR10A5Q9H207 317 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 REEP4Q9H6H4 257 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 PNPOQ9NVS9 261 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 ANKRD10Q9NXR5 420 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 ASIC5Q9NY37 505 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 MAT2BQ9NZL9 334 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 LUZP4Q9P127 313 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 LRFN1Q9P244 771 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 EIF3LQ9Y262 564 aaKnown RBP10.96□□□□□ -0.65
HSPG2-206ENST00000439717 CFL2Q9Y281 166 aa10.96□□□□□ -0.65
HSPG2-206ENST00000439717 SPTA1P02549 2419 aa10.95□□□□□ -0.66
HSPG2-206ENST00000439717 WWP2O00308 870 aa10.95□□□□□ -0.66
HSPG2-206ENST00000439717 NEURL1O76050 574 aa10.95□□□□□ -0.66
HSPG2-206ENST00000439717 NTSP30990 170 aa10.95□□□□□ -0.66
HSPG2-206ENST00000439717 MLLT10P55197 1068 aa10.95□□□□□ -0.66
HSPG2-206ENST00000439717 DUSP2Q05923 314 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms