RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 CCDC88CQ9P219 2028 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 HYKKA2RU49 373 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 ANKDD1BA6NHY2 528 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 HMGN4O00479 90 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 TPST2O60704 377 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 MMP20O60882 483 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 CCNKO75909 580 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 TP53P04637 393 aaPredicted RBP15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 HBQ1P09105 142 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 PSMA1P25786 263 aaKnown RBP15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 RCVRNP35243 200 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 BSGP35613 385 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 FRKP42685 505 aaPredicted RBP15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 MAPK12P53778 367 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 MANFP55145 182 aaKnown RBP15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 OR2B6P58173 313 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 ALDH6A1Q02252 535 aaKnown RBP15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 MLLT11Q13015 90 aaPredicted RBP15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 ATAT1Q5SQI0 421 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 KHDRBS2Q5VWX1 349 aaKnown RBP15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 ZNF544Q6NX49 715 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 CHRDL2Q6WN34 429 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 DEF8Q6ZN54 512 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 C6orf120Q7Z4R8 191 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 OR8H2Q8N162 312 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 PROKR2Q8NFJ6 384 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 GPR151Q8TDV0 419 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 RAB8BQ92930 207 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 ZNF514Q96K75 400 aaPredicted RBP15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 TSSK6Q9BXA6 273 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 MS4A8Q9BY19 250 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 ABCG4Q9H172 646 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 POLR2J3Q9H1A7 115 aaKnown RBP15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 TRPV4Q9HBA0 871 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 SEMA3GQ9NS98 782 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 H3BN98 237 aa15.52■□□□□ 0.07
CLCNKA-203ENST00000439316 KPNA3O00505 521 aaPredicted RBP15.52■□□□□ 0.07
CLCNKA-203ENST00000439316 RGS13O14921 159 aa15.52■□□□□ 0.07
CLCNKA-203ENST00000439316 HOXC11O43248 304 aaPredicted RBP15.52■□□□□ 0.07
CLCNKA-203ENST00000439316 UGT2B17O75795 530 aa15.52■□□□□ 0.07
CLCNKA-203ENST00000439316 POP7O75817 140 aaKnown RBP15.52■□□□□ 0.07
CLCNKA-203ENST00000439316 RORCP51449 518 aa15.52■□□□□ 0.07
CLCNKA-203ENST00000439316 METAP1P53582 386 aa15.52■□□□□ 0.07
CLCNKA-203ENST00000439316 PCBP4P57723 403 aaKnown RBP15.52■□□□□ 0.07
CLCNKA-203ENST00000439316 PSPHP78330 225 aa15.52■□□□□ 0.07
CLCNKA-203ENST00000439316 GPR50Q13585 617 aa15.52■□□□□ 0.07
CLCNKA-203ENST00000439316 NFE2L1Q14494 772 aa15.52■□□□□ 0.07
CLCNKA-203ENST00000439316 RSBN1Q5VWQ0 802 aaPredicted RBP15.52■□□□□ 0.07
CLCNKA-203ENST00000439316 RAET1GQ6H3X3 334 aa15.52■□□□□ 0.07
CLCNKA-203ENST00000439316 RBM45Q8IUH3 476 aaKnown RBP15.52■□□□□ 0.07
CLCNKA-203ENST00000439316 OR2L2Q8NH16 312 aa15.52■□□□□ 0.07
CLCNKA-203ENST00000439316 OR52A5Q9H2C5 316 aa15.52■□□□□ 0.07
CLCNKA-203ENST00000439316 PLAGL1Q9UM63 463 aa15.52■□□□□ 0.07
CLCNKA-203ENST00000439316 PCDHGB2Q9Y5G2 931 aa15.52■□□□□ 0.07
CLCNKA-203ENST00000439316 IQCMA0A1B0GVH7 501 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 ANHXE9PGG2 379 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 RTCAO00442 366 aaKnown RBP15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 NFATC1O95644 943 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 CISD3P0C7P0 127 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 GPR1P46091 355 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 HTR3AP46098 478 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 SMIM11AP58511 58 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 CNTN1Q12860 1018 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 HEPACAMQ14CZ8 416 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 ZNF79Q15937 498 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 NDUFA5Q16718 116 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 VITQ6UXI7 678 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 TMPRSS11AQ6ZMR5 421 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 FAM83HQ6ZRV2 1179 aaPredicted RBP15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 NRARPQ7Z6K4 114 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 SLC7A5P1Q8MH63 180 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 CACTIN-AS1Q8N1I8 211 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 TCEANCQ8N8B7 351 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 Q8N9G6 341 aaPredicted RBP15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 OR6F1Q8NGZ6 308 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 RASSF5Q8WWW0 418 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 SMPDL3AQ92484 453 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 RAD51AP1Q96B01 352 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 ZNF764Q96H86 408 aaPredicted RBP15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 MYADMQ96S97 322 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 WFDC6Q9BQY6 131 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 SERHL2Q9H4I8 314 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 PELI2Q9HAT8 420 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 ERGP11308 486 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 KELP23276 732 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 S100A1P23297 94 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 RFX2P48378 723 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 MESP2Q0VG99 397 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 HSPB3Q12988 150 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 C11orf96Q7Z7L8 435 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 PDZD3Q86UT5 571 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 LAX1Q8IWV1 398 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 PHC2Q8IXK0 858 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 ANKRD53Q8N9V6 530 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 FAM181AQ8N9Y4 354 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 OR5AR1Q8NGP9 310 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 SLC7A13Q8TCU3 470 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 CAPSLQ8WWF8 208 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 F2RL3Q96RI0 385 aa15.51■□□□□ 0.07
CLCNKA-203ENST00000439316 ZNF607Q96SK3 696 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms