RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 C11orf24Q96F05 449 aaPredicted RBP22.89■■□□□ 1.25
RAPGEF1-206ENST00000438647 WWTR1Q9GZV5 400 aa22.89■■□□□ 1.25
RAPGEF1-206ENST00000438647 DLGAP4Q9Y2H0 992 aa22.89■■□□□ 1.25
RAPGEF1-206ENST00000438647 HECTD1Q9ULT8 2610 aa22.89■■□□□ 1.25
RAPGEF1-206ENST00000438647 A0A1B0GUH1 482 aa22.88■■□□□ 1.25
RAPGEF1-206ENST00000438647 A0A1W2PS29 197 aa22.88■■□□□ 1.25
RAPGEF1-206ENST00000438647 NPIPA5E9PKD4 350 aa22.88■■□□□ 1.25
RAPGEF1-206ENST00000438647 RGS16O15492 202 aaPredicted RBP22.88■■□□□ 1.25
RAPGEF1-206ENST00000438647 RSL1D1O76021 490 aaKnown RBP22.88■■□□□ 1.25
RAPGEF1-206ENST00000438647 ATP1B1P05026 303 aa22.88■■□□□ 1.25
RAPGEF1-206ENST00000438647 IL3P08700 152 aa22.88■■□□□ 1.25
RAPGEF1-206ENST00000438647 SRSF11Q05519 484 aaKnown RBP22.88■■□□□ 1.25
RAPGEF1-206ENST00000438647 ZNF844Q08AG5 666 aa22.88■■□□□ 1.25
RAPGEF1-206ENST00000438647 FUT7Q11130 342 aa22.88■■□□□ 1.25
RAPGEF1-206ENST00000438647 EBPQ15125 230 aaKnown RBP22.88■■□□□ 1.25
RAPGEF1-206ENST00000438647 MMP21Q8N119 569 aa22.88■■□□□ 1.25
RAPGEF1-206ENST00000438647 OR7G1Q8NGA0 311 aa22.88■■□□□ 1.25
RAPGEF1-206ENST00000438647 FAM76AQ8TAV0 307 aa22.88■■□□□ 1.25
RAPGEF1-206ENST00000438647 METTL2AQ96IZ6 378 aaKnown RBP22.88■■□□□ 1.25
RAPGEF1-206ENST00000438647 PSMG3-AS1Q96PY0 264 aa22.88■■□□□ 1.25
RAPGEF1-206ENST00000438647 SHCBP1LQ9BZQ2 653 aa22.88■■□□□ 1.25
RAPGEF1-206ENST00000438647 SLC17A7Q9P2U7 560 aa22.88■■□□□ 1.25
RAPGEF1-206ENST00000438647 UTS2RQ9UKP6 389 aa22.88■■□□□ 1.25
RAPGEF1-206ENST00000438647 NPIPA1Q9UND3 350 aa22.88■■□□□ 1.25
RAPGEF1-206ENST00000438647 AZIN1O14977 448 aa22.87■■□□□ 1.25
RAPGEF1-206ENST00000438647 NPHS1O60500 1241 aa22.87■■□□□ 1.25
RAPGEF1-206ENST00000438647 CHEK2O96017 543 aa22.87■■□□□ 1.25
RAPGEF1-206ENST00000438647 ANXA4P09525 319 aaPredicted RBP22.87■■□□□ 1.25
RAPGEF1-206ENST00000438647 SERPINB3P29508 390 aa22.87■■□□□ 1.25
RAPGEF1-206ENST00000438647 ALDH3A1P30838 453 aa22.87■■□□□ 1.25
RAPGEF1-206ENST00000438647 SSTR4P31391 388 aa22.87■■□□□ 1.25
RAPGEF1-206ENST00000438647 FEN1P39748 380 aaKnown RBP22.87■■□□□ 1.25
RAPGEF1-206ENST00000438647 ZNF763Q0D2J5 394 aa22.87■■□□□ 1.25
RAPGEF1-206ENST00000438647 HLA-DQA1Q5Y7H0 255 aa22.87■■□□□ 1.25
RAPGEF1-206ENST00000438647 CROCCP2Q86T23 111 aa22.87■■□□□ 1.25
RAPGEF1-206ENST00000438647 SIAH3Q8IW03 269 aa22.87■■□□□ 1.25
RAPGEF1-206ENST00000438647 TAGAPQ8N103 731 aa22.87■■□□□ 1.25
RAPGEF1-206ENST00000438647 LRRC25Q8N386 305 aaPredicted RBP22.87■■□□□ 1.25
RAPGEF1-206ENST00000438647 VWA5B2Q8N398 1253 aa22.87■■□□□ 1.25
RAPGEF1-206ENST00000438647 ZFP62Q8NB50 900 aaPredicted RBP22.87■■□□□ 1.25
RAPGEF1-206ENST00000438647 C16orf78Q8WTQ4 265 aa22.87■■□□□ 1.25
RAPGEF1-206ENST00000438647 OR10A5Q9H207 317 aa22.87■■□□□ 1.25
RAPGEF1-206ENST00000438647 EML4Q9HC35 981 aaKnown RBP22.87■■□□□ 1.25
RAPGEF1-206ENST00000438647 GIMAP4Q9NUV9 329 aa22.87■■□□□ 1.25
RAPGEF1-206ENST00000438647 CFL2Q9Y281 166 aa22.87■■□□□ 1.25
RAPGEF1-206ENST00000438647 C2orf92A0A1B0GVN3 265 aa22.86■■□□□ 1.25
RAPGEF1-206ENST00000438647 TFECO14948 347 aaPredicted RBP22.86■■□□□ 1.25
RAPGEF1-206ENST00000438647 LRRTM2O43300 516 aa22.86■■□□□ 1.25
RAPGEF1-206ENST00000438647 LDLRP01130 860 aa22.86■■□□□ 1.25
RAPGEF1-206ENST00000438647 CLPSP04118 112 aa22.86■■□□□ 1.25
RAPGEF1-206ENST00000438647 CT62P0C5K7 136 aa22.86■■□□□ 1.25
RAPGEF1-206ENST00000438647 GPR85P60893 370 aa22.86■■□□□ 1.25
RAPGEF1-206ENST00000438647 MAP4K2Q12851 820 aa22.86■■□□□ 1.25
RAPGEF1-206ENST00000438647 ZNF750Q32MQ0 723 aa22.86■■□□□ 1.25
RAPGEF1-206ENST00000438647 CLEC6AQ6EIG7 209 aa22.86■■□□□ 1.25
RAPGEF1-206ENST00000438647 BNC2Q6ZN30 1099 aaPredicted RBP22.86■■□□□ 1.25
RAPGEF1-206ENST00000438647 GHDCQ8N2G8 530 aa22.86■■□□□ 1.25
RAPGEF1-206ENST00000438647 C16orf52Q8NHV5 167 aa22.86■■□□□ 1.25
RAPGEF1-206ENST00000438647 TP53INP1Q96A56 240 aa22.86■■□□□ 1.25
RAPGEF1-206ENST00000438647 MAGED4Q96JG8 741 aa22.86■■□□□ 1.25
RAPGEF1-206ENST00000438647 EBPLQ9BY08 206 aa22.86■■□□□ 1.25
RAPGEF1-206ENST00000438647 BRINP2Q9C0B6 783 aa22.86■■□□□ 1.25
RAPGEF1-206ENST00000438647 TSPAN10Q9H1Z9 355 aaPredicted RBP22.86■■□□□ 1.25
RAPGEF1-206ENST00000438647 TNFRSF12AQ9NP84 129 aa22.86■■□□□ 1.25
RAPGEF1-206ENST00000438647 PFDN4Q9NQP4 134 aa22.86■■□□□ 1.25
RAPGEF1-206ENST00000438647 SACM1LQ9NTJ5 587 aa22.86■■□□□ 1.25
RAPGEF1-206ENST00000438647 EHD3Q9NZN3 535 aa22.86■■□□□ 1.25
RAPGEF1-206ENST00000438647 HEY2Q9UBP5 337 aa22.86■■□□□ 1.25
RAPGEF1-206ENST00000438647 ENTPD4Q9Y227 616 aa22.86■■□□□ 1.25
RAPGEF1-206ENST00000438647 WBP11Q9Y2W2 641 aaKnown RBP22.86■■□□□ 1.25
RAPGEF1-206ENST00000438647 SETXQ7Z333 2677 aaKnown RBP22.85■■□□□ 1.25
RAPGEF1-206ENST00000438647 USP9YO00507 2555 aaPredicted RBP22.85■■□□□ 1.25
RAPGEF1-206ENST00000438647 WIPF3A6NGB9 483 aa22.85■■□□□ 1.25
RAPGEF1-206ENST00000438647 SLC28A1O00337 649 aa22.85■■□□□ 1.25
RAPGEF1-206ENST00000438647 ASNA1O43681 348 aa22.85■■□□□ 1.25
RAPGEF1-206ENST00000438647 ZNF354AO60765 605 aaPredicted RBP22.85■■□□□ 1.25
RAPGEF1-206ENST00000438647 P04436 131 aa22.85■■□□□ 1.25
RAPGEF1-206ENST00000438647 NEFHP12036 1026 aa22.85■■□□□ 1.25
RAPGEF1-206ENST00000438647 SERPINB5P36952 375 aa22.85■■□□□ 1.25
RAPGEF1-206ENST00000438647 CASP6P55212 293 aa22.85■■□□□ 1.25
RAPGEF1-206ENST00000438647 PRICKLE4Q2TBC4 344 aa22.85■■□□□ 1.25
RAPGEF1-206ENST00000438647 GK5Q6ZS86 529 aa22.85■■□□□ 1.25
RAPGEF1-206ENST00000438647 RNF165Q6ZSG1 346 aa22.85■■□□□ 1.25
RAPGEF1-206ENST00000438647 ZNF615Q8N8J6 731 aa22.85■■□□□ 1.25
RAPGEF1-206ENST00000438647 SPACA9Q96E40 222 aaPredicted RBP22.85■■□□□ 1.25
RAPGEF1-206ENST00000438647 CNRIP1Q96F85 164 aaPredicted RBP22.85■■□□□ 1.25
RAPGEF1-206ENST00000438647 ZNF681Q96N22 645 aa22.85■■□□□ 1.25
RAPGEF1-206ENST00000438647 MECRQ9BV79 373 aa22.85■■□□□ 1.25
RAPGEF1-206ENST00000438647 SPTAN1Q13813 2472 aaKnown RBP22.85■■□□□ 1.25
RAPGEF1-206ENST00000438647 SPTBN1Q01082 2364 aaKnown RBP22.84■■□□□ 1.25
RAPGEF1-206ENST00000438647 CAPN14A8MX76 684 aa22.84■■□□□ 1.25
RAPGEF1-206ENST00000438647 ACOT7O00154 380 aa22.84■■□□□ 1.25
RAPGEF1-206ENST00000438647 RGS14O43566 566 aa22.84■■□□□ 1.25
RAPGEF1-206ENST00000438647 TYROBPO43914 113 aa22.84■■□□□ 1.25
RAPGEF1-206ENST00000438647 NADKO95544 446 aaPredicted RBP22.84■■□□□ 1.25
RAPGEF1-206ENST00000438647 ZNF791Q3KP31 576 aaPredicted RBP22.84■■□□□ 1.25
RAPGEF1-206ENST00000438647 RNFT1Q5M7Z0 435 aa22.84■■□□□ 1.25
RAPGEF1-206ENST00000438647 C17orf47Q8NEP4 570 aa22.84■■□□□ 1.25
RAPGEF1-206ENST00000438647 OR2M7Q8NG81 312 aa22.84■■□□□ 1.25
RAPGEF1-206ENST00000438647 RELTQ969Z4 430 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms