RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 OR4C11Q6IEV9 310 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 GRHL2Q6ISB3 625 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 ZNF793Q6ZN11 406 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 C3orf62Q6ZUJ4 267 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 CCDC91Q7Z6B0 441 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 OR4N5Q8IXE1 308 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 FBXW8Q8N3Y1 598 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 RPRMLQ8N4K4 120 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 SLC15A4Q8N697 577 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 TEX9Q8N6V9 391 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 ZNF321PQ8N8H1 164 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 CHDHQ8NE62 594 aaPredicted RBP7.16□□□□□ -1.26
VPS50-204ENST00000438395 OR7G3Q8NG95 312 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 ZNF473Q8WTR7 871 aaKnown RBP7.16□□□□□ -1.26
VPS50-204ENST00000438395 UBTD2Q8WUN7 234 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 TANKQ92844 425 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 ZNF597Q96LX8 424 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 MTERF1Q99551 399 aaKnown RBP7.16□□□□□ -1.26
VPS50-204ENST00000438395 TREX2Q9BQ50 279 aaPredicted RBP7.16□□□□□ -1.26
VPS50-204ENST00000438395 ERP44Q9BS26 406 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 TTYH2Q9BSA4 534 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 DOHHQ9BU89 302 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 OR51B5Q9H339 312 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 ZFP64Q9NPA5 681 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 PRDM7Q9NQW5 492 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 TUBA8Q9NY65 449 aaPredicted RBP7.16□□□□□ -1.26
VPS50-204ENST00000438395 FRRS1LQ9P0K9 344 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 TNFRSF10DQ9UBN6 386 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 ZNF490Q9ULM2 529 aaPredicted RBP7.16□□□□□ -1.26
VPS50-204ENST00000438395 UTP11Q9Y3A2 253 aaKnown RBP7.16□□□□□ -1.26
VPS50-204ENST00000438395 CLDN16Q9Y5I7 305 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 LIPGQ9Y5X9 500 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 MAP1AP78559 2803 aaPredicted RBP7.16□□□□□ -1.26
VPS50-204ENST00000438395 DNAJC13O75165 2243 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 A0A087X1B8 175 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 A0A1B0GVC2 190 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 TMEM200CA6NKL6 621 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 OR6C76A6NM76 312 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 HSPB2A8KAH6 182 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 CXorf49A8MYA2 514 aaPredicted RBP7.15□□□□□ -1.26
VPS50-204ENST00000438395 UBXN8O00124 270 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 KLK8O60259 260 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 SCELO95171 688 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 NADKO95544 446 aaPredicted RBP7.15□□□□□ -1.26
VPS50-204ENST00000438395 ETHE1O95571 254 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 CELA3AP09093 270 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 GLI4P10075 376 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 PTX3P26022 381 aaPredicted RBP7.15□□□□□ -1.26
VPS50-204ENST00000438395 PIK3CBP42338 1070 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 CASP2P42575 452 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 KIR2DL3P43628 341 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 TRPC1P48995 793 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 PLTPP55058 493 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 NRG3P56975 720 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 HERVK_113P63132 956 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 ERVK-8P63133 956 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 PPP2R2AP63151 447 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 TFF3Q07654 80 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 FOXO1Q12778 655 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 ZNF267Q14586 743 aaPredicted RBP7.15□□□□□ -1.26
VPS50-204ENST00000438395 TOMM20Q15388 145 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 HSPB2Q16082 182 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 KBTBD12Q3ZCT8 623 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 PIGGQ5H8A4 983 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 TMEM198Q66K66 360 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 OR52E8Q6IFG1 317 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 UBE3DQ7Z6J8 389 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 CMC1Q7Z7K0 106 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 NUDT13Q86X67 352 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 WFDC8Q8IUA0 241 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 C9orf40Q8IXQ3 194 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 LAS2Q8IYD9 372 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 ST13P4Q8IZP2 240 aaPredicted RBP7.15□□□□□ -1.26
VPS50-204ENST00000438395 ZCCHC7Q8N3Z6 543 aaKnown RBP7.15□□□□□ -1.26
VPS50-204ENST00000438395 ACBD4Q8NC06 268 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 GOT1L1Q8NHS2 421 aaPredicted RBP7.15□□□□□ -1.26
VPS50-204ENST00000438395 HUS1BQ8NHY5 278 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 PAQR8Q8TEZ7 354 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 ZNF721Q8TF20 911 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 DIO2Q92813 273 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 RIT1Q92963 219 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 ATP6V1E2Q96A05 226 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 ANKRD9Q96BM1 317 aaPredicted RBP7.15□□□□□ -1.26
VPS50-204ENST00000438395 PPWD1Q96BP3 646 aaKnown RBP7.15□□□□□ -1.26
VPS50-204ENST00000438395 RMND5BQ96G75 393 aaPredicted RBP7.15□□□□□ -1.26
VPS50-204ENST00000438395 UBXN10Q96LJ8 280 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 MCMBPQ9BTE3 642 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 SORBS1Q9BX66 1292 aaKnown RBP7.15□□□□□ -1.26
VPS50-204ENST00000438395 ERVK-6Q9BXR3 956 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 POLDIP3Q9BY77 421 aaKnown RBP7.15□□□□□ -1.26
VPS50-204ENST00000438395 RAB17Q9H0T7 212 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 SLC6A15Q9H2J7 730 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 ZNF703Q9H7S9 590 aaPredicted RBP7.15□□□□□ -1.26
VPS50-204ENST00000438395 GRPEL1Q9HAV7 217 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 DMRT3Q9NQL9 472 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 SNX15Q9NRS6 342 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 QPCTLQ9NXS2 382 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 MTRF1LQ9UGC7 380 aaKnown RBP7.15□□□□□ -1.26
VPS50-204ENST00000438395 ERVK-19Q9WJR5 959 aa7.15□□□□□ -1.26
VPS50-204ENST00000438395 ACOT9Q9Y305 439 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms