RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.52□□□□□ -0.25
HDAC8-213ENST00000436675 CHMP2BQ9UQN3 213 aa13.52□□□□□ -0.25
HDAC8-213ENST00000436675 USF3Q68DE3 2245 aa13.52□□□□□ -0.25
HDAC8-213ENST00000436675 ANKRD33BA6NCL7 494 aa13.51□□□□□ -0.25
HDAC8-213ENST00000436675 GLOD5A6NK44 160 aa13.51□□□□□ -0.25
HDAC8-213ENST00000436675 SNPHO15079 494 aa13.51□□□□□ -0.25
HDAC8-213ENST00000436675 OR10H2O60403 315 aa13.51□□□□□ -0.25
HDAC8-213ENST00000436675 ELK3P41970 407 aa13.51□□□□□ -0.25
HDAC8-213ENST00000436675 SLC37A1P57057 533 aa13.51□□□□□ -0.25
HDAC8-213ENST00000436675 IRF8Q02556 426 aa13.51□□□□□ -0.25
HDAC8-213ENST00000436675 CBLBQ13191 982 aa13.51□□□□□ -0.25
HDAC8-213ENST00000436675 CHIT1Q13231 466 aa13.51□□□□□ -0.25
HDAC8-213ENST00000436675 RPS6KA2Q15349 733 aa13.51□□□□□ -0.25
HDAC8-213ENST00000436675 PPP1R7Q15435 360 aa13.51□□□□□ -0.25
HDAC8-213ENST00000436675 TGFBIQ15582 683 aa13.51□□□□□ -0.25
HDAC8-213ENST00000436675 HIST2H2ACQ16777 129 aaPredicted RBP13.51□□□□□ -0.25
HDAC8-213ENST00000436675 TBCELQ5QJ74 424 aa13.51□□□□□ -0.25
HDAC8-213ENST00000436675 HIST2H2AA3Q6FI13 130 aa13.51□□□□□ -0.25
HDAC8-213ENST00000436675 FAM83FQ8NEG4 500 aaPredicted RBP13.51□□□□□ -0.25
HDAC8-213ENST00000436675 SPPL2AQ8TCT8 520 aa13.51□□□□□ -0.25
HDAC8-213ENST00000436675 ZNF473Q8WTR7 871 aaKnown RBP13.51□□□□□ -0.25
HDAC8-213ENST00000436675 ANKRD7Q92527 254 aa13.51□□□□□ -0.25
HDAC8-213ENST00000436675 PIK3IP1Q96FE7 263 aa13.51□□□□□ -0.25
HDAC8-213ENST00000436675 CCL19Q99731 98 aa13.51□□□□□ -0.25
HDAC8-213ENST00000436675 PIP5K1AQ99755 562 aa13.51□□□□□ -0.25
HDAC8-213ENST00000436675 EFCAB11Q9BUY7 163 aa13.51□□□□□ -0.25
HDAC8-213ENST00000436675 EHD1Q9H4M9 534 aa13.51□□□□□ -0.25
HDAC8-213ENST00000436675 NDRG3Q9UGV2 375 aa13.51□□□□□ -0.25
HDAC8-213ENST00000436675 C2orf92A0A1B0GVN3 265 aa13.5□□□□□ -0.25
HDAC8-213ENST00000436675 C2orf72A6NCS6 295 aa13.5□□□□□ -0.25
HDAC8-213ENST00000436675 H0Y3Z8 333 aa13.5□□□□□ -0.25
HDAC8-213ENST00000436675 SIAH2O43255 324 aa13.5□□□□□ -0.25
HDAC8-213ENST00000436675 CCNT2O60583 730 aaKnown RBP13.5□□□□□ -0.25
HDAC8-213ENST00000436675 STK16O75716 305 aa13.5□□□□□ -0.25
HDAC8-213ENST00000436675 CLPSP04118 112 aa13.5□□□□□ -0.25
HDAC8-213ENST00000436675 SSTR4P31391 388 aa13.5□□□□□ -0.25
HDAC8-213ENST00000436675 HNRNPH2P55795 449 aaKnown RBP13.5□□□□□ -0.25
HDAC8-213ENST00000436675 LAPTM5Q13571 262 aa13.5□□□□□ -0.25
HDAC8-213ENST00000436675 DDX39BQ13838 428 aaKnown RBP13.5□□□□□ -0.25
HDAC8-213ENST00000436675 PDK4Q16654 411 aa13.5□□□□□ -0.25
HDAC8-213ENST00000436675 NHSL2Q5HYW2 709 aa13.5□□□□□ -0.25
HDAC8-213ENST00000436675 PAGE2BQ5JRK9 111 aa13.5□□□□□ -0.25
HDAC8-213ENST00000436675 OR4C11Q6IEV9 310 aa13.5□□□□□ -0.25
HDAC8-213ENST00000436675 ZC3HC1Q86WB0 502 aaKnown RBP13.5□□□□□ -0.25
HDAC8-213ENST00000436675 ST13P4Q8IZP2 240 aaPredicted RBP13.5□□□□□ -0.25
HDAC8-213ENST00000436675 TRIM58Q8NG06 486 aa13.5□□□□□ -0.25
HDAC8-213ENST00000436675 TANKQ92844 425 aa13.5□□□□□ -0.25
HDAC8-213ENST00000436675 RIT1Q92963 219 aa13.5□□□□□ -0.25
HDAC8-213ENST00000436675 EXT2Q93063 718 aa13.5□□□□□ -0.25
HDAC8-213ENST00000436675 VPS39Q96JC1 886 aa13.5□□□□□ -0.25
HDAC8-213ENST00000436675 NAT9Q9BTE0 207 aa13.5□□□□□ -0.25
HDAC8-213ENST00000436675 SFXN3Q9BWM7 321 aa13.5□□□□□ -0.25
HDAC8-213ENST00000436675 ANGPTL4Q9BY76 406 aa13.5□□□□□ -0.25
HDAC8-213ENST00000436675 CNOT10Q9H9A5 744 aaKnown RBP13.5□□□□□ -0.25
HDAC8-213ENST00000436675 KLHL28Q9NXS3 571 aa13.5□□□□□ -0.25
HDAC8-213ENST00000436675 ASIC3Q9UHC3 531 aa13.5□□□□□ -0.25
HDAC8-213ENST00000436675 TESMINQ9Y4I5 508 aa13.5□□□□□ -0.25
HDAC8-213ENST00000436675 WIF1Q9Y5W5 379 aa13.5□□□□□ -0.25
HDAC8-213ENST00000436675 NPFFR2Q9Y5X5 522 aa13.5□□□□□ -0.25
HDAC8-213ENST00000436675 CAPN14A8MX76 684 aa13.49□□□□□ -0.25
HDAC8-213ENST00000436675 DNALI1O14645 258 aaPredicted RBP13.49□□□□□ -0.25
HDAC8-213ENST00000436675 SNX4O95219 450 aa13.49□□□□□ -0.25
HDAC8-213ENST00000436675 NID1P14543 1247 aa13.49□□□□□ -0.25
HDAC8-213ENST00000436675 EPORP19235 508 aa13.49□□□□□ -0.25
HDAC8-213ENST00000436675 CASP3P42574 277 aa13.49□□□□□ -0.25
HDAC8-213ENST00000436675 RAP1GDS1P52306 607 aa13.49□□□□□ -0.25
HDAC8-213ENST00000436675 FAM27E3Q08E93 113 aa13.49□□□□□ -0.25
HDAC8-213ENST00000436675 SETDB1Q15047 1291 aa13.49□□□□□ -0.25
HDAC8-213ENST00000436675 ACKR1Q16570 336 aa13.49□□□□□ -0.25
HDAC8-213ENST00000436675 CYP1B1Q16678 543 aa13.49□□□□□ -0.25
HDAC8-213ENST00000436675 TMEM35AQ53FP2 167 aa13.49□□□□□ -0.25
HDAC8-213ENST00000436675 HLA-DQA1Q5Y7H0 255 aa13.49□□□□□ -0.25
HDAC8-213ENST00000436675 DESI1Q6ICB0 168 aa13.49□□□□□ -0.25
HDAC8-213ENST00000436675 ANGPTL8Q6UXH0 198 aa13.49□□□□□ -0.25
HDAC8-213ENST00000436675 GPR180Q86V85 440 aa13.49□□□□□ -0.25
HDAC8-213ENST00000436675 GPSM1Q86YR5 675 aa13.49□□□□□ -0.25
HDAC8-213ENST00000436675 TCAIMQ8N3R3 496 aa13.49□□□□□ -0.25
HDAC8-213ENST00000436675 RDH11Q8TC12 318 aa13.49□□□□□ -0.25
HDAC8-213ENST00000436675 ZPLD1Q8TCW7 415 aa13.49□□□□□ -0.25
HDAC8-213ENST00000436675 UCN3Q969E3 161 aa13.49□□□□□ -0.25
HDAC8-213ENST00000436675 WDR34Q96EX3 536 aa13.49□□□□□ -0.25
HDAC8-213ENST00000436675 WFIKKN1Q96NZ8 548 aa13.49□□□□□ -0.25
HDAC8-213ENST00000436675 PIGQQ9BRB3 760 aa13.49□□□□□ -0.25
HDAC8-213ENST00000436675 CD274Q9NZQ7 290 aa13.49□□□□□ -0.25
HDAC8-213ENST00000436675 A0A1W2PS29 197 aa13.48□□□□□ -0.25
HDAC8-213ENST00000436675 OR6C76A6NM76 312 aa13.48□□□□□ -0.25
HDAC8-213ENST00000436675 DEFB108AA8MXU0 73 aa13.48□□□□□ -0.25
HDAC8-213ENST00000436675 CTIFO43310 598 aaKnown RBP13.48□□□□□ -0.25
HDAC8-213ENST00000436675 SMNDC1O75940 238 aaKnown RBP eCLIP13.48□□□□□ -0.25
HDAC8-213ENST00000436675 SCELO95171 688 aa13.48□□□□□ -0.25
HDAC8-213ENST00000436675 RCBTB2O95199 551 aa13.48□□□□□ -0.25
HDAC8-213ENST00000436675 CNOT4O95628 575 aaKnown RBP13.48□□□□□ -0.25
HDAC8-213ENST00000436675 GPR75O95800 540 aa13.48□□□□□ -0.25
HDAC8-213ENST00000436675 PTPN6P29350 595 aa13.48□□□□□ -0.25
HDAC8-213ENST00000436675 TLX1P31314 330 aaPredicted RBP13.48□□□□□ -0.25
HDAC8-213ENST00000436675 GGT5P36269 586 aa13.48□□□□□ -0.25
HDAC8-213ENST00000436675 STARP49675 285 aa13.48□□□□□ -0.25
HDAC8-213ENST00000436675 TNFRSF17Q02223 184 aa13.48□□□□□ -0.25
HDAC8-213ENST00000436675 BIKQ13323 160 aa13.48□□□□□ -0.25
HDAC8-213ENST00000436675 OR4D1Q15615 310 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms