RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 CALRP27797 417 aaKnown RBP2.39□□□□□ -2.03
PTPN4-205ENST00000433888 AKT2P31751 481 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 SFNP31947 248 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 PITPNBP48739 271 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 ATXN3P54252 364 aaPredicted RBP2.39□□□□□ -2.03
PTPN4-205ENST00000433888 UCNP55089 124 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 AKAP17AQ02040 695 aaKnown RBP2.39□□□□□ -2.03
PTPN4-205ENST00000433888 CDO1Q16878 200 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 ZNF542PQ5EBM4 170 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 PRAMEF7Q5VXH5 474 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 OR6B2Q6IFH4 312 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 ARMCX5Q6P1M9 558 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 MFSD7Q6UXD7 560 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 ADAMTSL2Q86TH1 951 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 ZNF410Q86VK4 478 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 ZBTB44Q8NCP5 570 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 TAF4BQ92750 862 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 ZNF799Q96GE5 643 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 CDKN2AIPNLQ96HQ2 116 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 RCHY1Q96PM5 261 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 FAM111AQ96PZ2 611 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 HSD17B14Q9BPX1 270 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 ATG101Q9BSB4 218 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 PINK1Q9BXM7 581 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 CARD9Q9H257 536 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 KCNK13Q9HB14 408 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 ZCCHC3Q9NUD5 404 aaKnown RBP2.39□□□□□ -2.03
PTPN4-205ENST00000433888 ACTR3BQ9P1U1 418 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 VPS18Q9P253 973 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 PSORS1C1Q9UIG5 152 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 SH3BGRL2Q9UJC5 107 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 BLOC1S6Q9UL45 172 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 AGTPBP1Q9UPW5 1226 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 SATB2Q9UPW6 733 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 TMED7Q9Y3B3 224 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 KLK4Q9Y5K2 254 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 CPQQ9Y646 472 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 CLCA3PQ9Y6N3 262 aa2.39□□□□□ -2.03
PTPN4-205ENST00000433888 C13orf42A0A1B0GVH6 325 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 LOC390937A0A1W2PQ73 354 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 FOXI3A8MTJ6 420 aaPredicted RBP2.38□□□□□ -2.03
PTPN4-205ENST00000433888 TCP10L2B9ZVM9 353 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 CACNB4O00305 520 aaPredicted RBP2.38□□□□□ -2.03
PTPN4-205ENST00000433888 MLNRO43193 412 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 B4GAT1O43505 415 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 ATP6V1G1O75348 118 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 FRAT2O75474 233 aaPredicted RBP2.38□□□□□ -2.03
PTPN4-205ENST00000433888 MT-ATP6P00846 226 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 PDGFBP01127 241 aaPredicted RBP2.38□□□□□ -2.03
PTPN4-205ENST00000433888 SKILP12757 684 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 MYL6BP14649 208 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 PRDX6P30041 224 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 RPL9P32969 192 aaKnown RBP2.38□□□□□ -2.03
PTPN4-205ENST00000433888 KIF5BP33176 963 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 TNFRSF4P43489 277 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 STARD6P59095 220 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 FKBP1BP68106 108 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 ARF5P84085 180 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 CKAP4Q07065 602 aaKnown RBP2.38□□□□□ -2.03
PTPN4-205ENST00000433888 ABRQ12979 859 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 KRT31Q15323 416 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 KCTD11Q693B1 232 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 FUT10Q6P4F1 479 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 MACC1Q6ZN28 852 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 PRSS42Q7Z5A4 293 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 AMIGO1Q86WK6 493 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 MEX3DQ86XN8 651 aaKnown RBP2.38□□□□□ -2.03
PTPN4-205ENST00000433888 TMEM126BQ8IUX1 230 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 KLHDC8AQ8IYD2 350 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 TMEM185AQ8NFB2 350 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 IPMKQ8NFU5 416 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 OR4A16Q8NH70 328 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 EXOC6Q8TAG9 804 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 NAP1L5Q96NT1 182 aaPredicted RBP2.38□□□□□ -2.03
PTPN4-205ENST00000433888 SIGLEC12Q96PQ1 595 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 MCCC1Q96RQ3 725 aaPredicted RBP2.38□□□□□ -2.03
PTPN4-205ENST00000433888 PCDHB18PQ96TA0 734 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 PAXXQ9BUH6 204 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 NTMT1Q9BV86 223 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 ZBP1Q9H171 429 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 NGBQ9NPG2 151 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 PNPLA3Q9NST1 481 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 SOHLH2Q9NX45 425 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 IL19Q9UHD0 177 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 RSPH14Q9UHP6 348 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 TRMT6Q9UJA5 497 aaKnown RBP2.38□□□□□ -2.03
PTPN4-205ENST00000433888 HOOK1Q9UJC3 728 aaKnown RBP2.38□□□□□ -2.03
PTPN4-205ENST00000433888 NCKAP1Q9Y2A7 1128 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 CHD4Q14839 1912 aa2.38□□□□□ -2.03
PTPN4-205ENST00000433888 MEGF6O75095 1541 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 RNF103-CHMP3A0A140T963 221 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 C2orf92A0A1B0GVN3 265 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 CCDC162PA2VCL2 907 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 ZSCAN5CA6NGD5 496 aaPredicted RBP2.37□□□□□ -2.03
PTPN4-205ENST00000433888 ANKDD1BA6NHY2 528 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 SDR42E2A6NKP2 422 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 ADAM12O43184 909 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 PSMD3O43242 534 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 HSF2BPO75031 334 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 LETM1O95202 739 aaPredicted RBP2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms