RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 FBXO17Q96EF6 278 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 CXorf58Q96LI9 332 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 USP28Q96RU2 1077 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 KRTAP17-1Q9BYP8 105 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 KRTAP9-8Q9BYQ0 159 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 NGBQ9NPG2 151 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 HPS4Q9NQG7 708 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 THAP10Q9P2Z0 257 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 MIOXQ9UGB7 285 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 PLCL2Q9UPR0 1127 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 RNF215Q9Y6U7 377 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 DEPDC5O75140 1603 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 ALKQ9UM73 1620 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 SCAF11Q99590 1463 aaKnown RBP2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 MROH2AA6NES4 1674 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 RTEL1-TNFRSF6BF6WH68 1400 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 FMN1Q68DA7 1419 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 KIAA1107Q9UPP5 1409 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 RAPGEF6Q8TEU7 1601 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 LOC390937A0A1W2PQ73 354 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 RNF222A6NCQ9 220 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 EPM2AB3EWF7 344 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 PRR23D1E9PI22 279 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 TRAFD1O14545 582 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 CHADO15335 359 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 GRID2O43424 1007 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 B4GAT1O43505 415 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 LANCL1O43813 399 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 SNAP91O60641 907 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 SMPD2O60906 423 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 CSO75390 466 aaKnown RBP2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 FRAT2O75474 233 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 GMNNO75496 209 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 NDUFA7O95182 113 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 IGHG1P01857 330 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 HIST1H2AGP0C0S8 130 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 CCDC159P0C7I6 412 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 PRR23D2P0DMB1 279 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 GHRP10912 638 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 GP9P14770 177 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 MAGEA4P43358 317 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 NUMBP49757 651 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 ERVK-16P61578 105 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 NAAAQ02083 359 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 PDZK1IP1Q13113 114 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 ZNF177Q13360 481 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 KLF5Q13887 457 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 TMEM187Q14656 261 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 SLC17A1Q14916 467 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 KARSQ15046 597 aaKnown RBP2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 P2RY14Q15391 338 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 HAGHQ16775 308 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 MTHFSDQ2M296 383 aaKnown RBP2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 ZNF699Q32M78 642 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 ZFP69Q49AA0 526 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 WDR25Q64LD2 544 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 RAET1GQ6H3X3 334 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 RTL6Q6ICC9 239 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 IRGCQ6NXR0 463 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 GDPGP1Q6ZNW5 385 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 Q6ZRG5 221 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 ZFAND4Q86XD8 727 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 UNC5CLQ8IV45 518 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 LRRC17Q8N6Y2 441 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 ZNF614Q8N883 585 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 BCORP1Q8N888 145 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 LEMD2Q8NC56 503 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 CHDHQ8NE62 594 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 ANKRD20A12PQ8NF67 263 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 ZNF397Q8NF99 534 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 OR52B4Q8NGK2 314 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 OR4F5Q8NH21 305 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 SSC4DQ8WTU2 575 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 CHPT1Q8WUD6 406 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 HIST1H2ACQ93077 130 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 NCLNQ969V3 563 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 MRPL24Q96A35 216 aaKnown RBP2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 ZNF274Q96GC6 653 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 ALKBH3Q96Q83 286 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 FAM124BQ9H5Z6 455 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 C3orf14Q9HBI5 128 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 GDF3Q9NR23 364 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 POLE3Q9NRF9 147 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 NDE1Q9NXR1 346 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 WWOXQ9NZC7 414 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 NDUFA13Q9P0J0 144 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 VPS54Q9P1Q0 977 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 MDFICQ9P1T7 246 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 COPS7AQ9UBW8 275 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 MRPS28Q9Y2Q9 187 aaKnown RBP2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 RNF115Q9Y4L5 304 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 ATG4BQ9Y4P1 393 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 ZHX2Q9Y6X8 837 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 PZPP20742 1482 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 PLEKHH2Q8IVE3 1493 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 ATP7AQ04656 1500 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 KIF26BQ2KJY2 2108 aa2.62□□□□□ -1.99
HMGB1P27-201ENST00000431429 TMEM2Q9UHN6 1383 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms