RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 TSSK4Q6SA08 328 aa15.7■□□□□ 0.1
USHBP1-203ENST00000431146 FAM92BQ6ZTR7 304 aa15.7■□□□□ 0.1
USHBP1-203ENST00000431146 WDR53Q7Z5U6 358 aaPredicted RBP15.7■□□□□ 0.1
USHBP1-203ENST00000431146 CAMKK1Q8N5S9 505 aa15.7■□□□□ 0.1
USHBP1-203ENST00000431146 C17orf50Q8WW18 174 aa15.7■□□□□ 0.1
USHBP1-203ENST00000431146 THAP11Q96EK4 314 aa15.7■□□□□ 0.1
USHBP1-203ENST00000431146 SEMA3GQ9NS98 782 aa15.7■□□□□ 0.1
USHBP1-203ENST00000431146 EXD2Q9NVH0 621 aa15.7■□□□□ 0.1
USHBP1-203ENST00000431146 NAALAD2Q9Y3Q0 740 aa15.7■□□□□ 0.1
USHBP1-203ENST00000431146 AQP9O43315 295 aa15.7■□□□□ 0.1
USHBP1-203ENST00000431146 TPD52L2O43399 206 aaKnown RBP15.7■□□□□ 0.1
USHBP1-203ENST00000431146 IFNA14P01570 189 aa15.7■□□□□ 0.1
USHBP1-203ENST00000431146 NXPH1P58417 271 aa15.7■□□□□ 0.1
USHBP1-203ENST00000431146 TMED1Q13445 227 aa15.7■□□□□ 0.1
USHBP1-203ENST00000431146 IQCHQ86VS3 1027 aa15.7■□□□□ 0.1
USHBP1-203ENST00000431146 SIMC1Q8NDZ2 872 aa15.7■□□□□ 0.1
USHBP1-203ENST00000431146 ZNF555Q8NEP9 628 aa15.7■□□□□ 0.1
USHBP1-203ENST00000431146 TREX2Q9BQ50 279 aaPredicted RBP15.7■□□□□ 0.1
USHBP1-203ENST00000431146 SEMA6CQ9H3T2 930 aa15.7■□□□□ 0.1
USHBP1-203ENST00000431146 C3orf18Q9UK00 162 aa15.7■□□□□ 0.1
USHBP1-203ENST00000431146 KCNE3Q9Y6H6 103 aa15.7■□□□□ 0.1
USHBP1-203ENST00000431146 LDB3O75112 727 aa15.69■□□□□ 0.1
USHBP1-203ENST00000431146 NR2F1P10589 423 aa15.69■□□□□ 0.1
USHBP1-203ENST00000431146 RANBP1P43487 201 aa15.69■□□□□ 0.1
USHBP1-203ENST00000431146 XKP51811 444 aa15.69■□□□□ 0.1
USHBP1-203ENST00000431146 CDH12P55289 794 aa15.69■□□□□ 0.1
USHBP1-203ENST00000431146 SPIBQ01892 262 aa15.69■□□□□ 0.1
USHBP1-203ENST00000431146 GANABQ14697 944 aaKnown RBP15.69■□□□□ 0.1
USHBP1-203ENST00000431146 NADK2Q4G0N4 442 aa15.69■□□□□ 0.1
USHBP1-203ENST00000431146 SLC30A8Q8IWU4 369 aa15.69■□□□□ 0.1
USHBP1-203ENST00000431146 C19orf47Q8N9M1 422 aaKnown RBP15.69■□□□□ 0.1
USHBP1-203ENST00000431146 ATG16L2Q8NAA4 619 aa15.69■□□□□ 0.1
USHBP1-203ENST00000431146 TMEM52Q8NDY8 209 aa15.69■□□□□ 0.1
USHBP1-203ENST00000431146 GEMIN6Q8WXD5 167 aaKnown RBP15.69■□□□□ 0.1
USHBP1-203ENST00000431146 ELP4Q96EB1 424 aa15.69■□□□□ 0.1
USHBP1-203ENST00000431146 RDH12Q96NR8 316 aa15.69■□□□□ 0.1
USHBP1-203ENST00000431146 ZNF300Q96RE9 604 aaPredicted RBP15.69■□□□□ 0.1
USHBP1-203ENST00000431146 SLC38A3Q99624 504 aa15.69■□□□□ 0.1
USHBP1-203ENST00000431146 MAP3K3Q99759 626 aa15.69■□□□□ 0.1
USHBP1-203ENST00000431146 YIPF3Q9GZM5 350 aa15.69■□□□□ 0.1
USHBP1-203ENST00000431146 ROGDIQ9GZN7 287 aa15.69■□□□□ 0.1
USHBP1-203ENST00000431146 GABARAPL1Q9H0R8 117 aa15.69■□□□□ 0.1
USHBP1-203ENST00000431146 RIBC2Q9H4K1 309 aa15.69■□□□□ 0.1
USHBP1-203ENST00000431146 ZSCAN32Q9NX65 697 aa15.69■□□□□ 0.1
USHBP1-203ENST00000431146 KIF17Q9P2E2 1029 aa15.69■□□□□ 0.1
USHBP1-203ENST00000431146 RHCGQ9UBD6 479 aa15.69■□□□□ 0.1
USHBP1-203ENST00000431146 P2RX2Q9UBL9 471 aa15.69■□□□□ 0.1
USHBP1-203ENST00000431146 MUTYHQ9UIF7 546 aa15.69■□□□□ 0.1
USHBP1-203ENST00000431146 PHF11Q9UIL8 331 aa15.69■□□□□ 0.1
USHBP1-203ENST00000431146 PSME2Q9UL46 239 aa15.69■□□□□ 0.1
USHBP1-203ENST00000431146 ORC6Q9Y5N6 252 aa15.69■□□□□ 0.1
USHBP1-203ENST00000431146 LYVE1Q9Y5Y7 322 aa15.69■□□□□ 0.1
USHBP1-203ENST00000431146 ASXL3Q9C0F0 2248 aa15.69■□□□□ 0.1
USHBP1-203ENST00000431146 LOC100130705A0A1B0GUX0 176 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 FAM227AF5H4B4 570 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 SGK494L7N484 410 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 B4GAT1O43505 415 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 MFN2O95140 757 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 RPL5P46777 297 aaKnown RBP15.68■□□□□ 0.1
USHBP1-203ENST00000431146 FASLGP48023 281 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 TPD52P55327 224 aaPredicted RBP15.68■□□□□ 0.1
USHBP1-203ENST00000431146 FUT5Q11128 374 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 ELOAQ14241 798 aaKnown RBP15.68■□□□□ 0.1
USHBP1-203ENST00000431146 PUM1Q14671 1186 aaKnown RBP eCLIP15.68■□□□□ 0.1
USHBP1-203ENST00000431146 CEBPEQ15744 281 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 C6orf132Q5T0Z8 1188 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 KDM4DQ6B0I6 523 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 TMEM64Q6YI46 380 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 ARMC8Q8IUR7 673 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 NUP43Q8NFH3 380 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 GPR32P1Q8NGA4 272 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 COL21A1Q96P44 957 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 WFDC6Q9BQY6 131 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 PCED1AQ9H1Q7 454 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 PCDHGA8Q9Y5G5 932 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 SLC22A7Q9Y694 548 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 WDFY4Q6ZS81 3184 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 TNFRSF11BO00300 401 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 PROS1P07225 676 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 FHP07954 510 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 IL7RP16871 459 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 CD247P20963 164 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 KHKP50053 298 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 RAD23AP54725 363 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 SHC2P98077 582 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 RELAQ04206 551 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 SIM2Q14190 667 aaPredicted RBP15.68■□□□□ 0.1
USHBP1-203ENST00000431146 TTC23Q5W5X9 447 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 FAM111BQ6SJ93 734 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 C8orf59Q8N0T1 100 aaPredicted RBP15.68■□□□□ 0.1
USHBP1-203ENST00000431146 ZNF655Q8N720 491 aaPredicted RBP15.68■□□□□ 0.1
USHBP1-203ENST00000431146 SFXN5Q8TD22 340 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 ING2Q9H160 280 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 PCDHGB3Q9Y5G1 929 aa15.68■□□□□ 0.1
USHBP1-203ENST00000431146 VILLO15195 856 aa15.67■□□□□ 0.1
USHBP1-203ENST00000431146 EMC8O43402 210 aa15.67■□□□□ 0.1
USHBP1-203ENST00000431146 ZNF10P21506 573 aaPredicted RBP15.67■□□□□ 0.1
USHBP1-203ENST00000431146 EPHA2P29317 976 aa15.67■□□□□ 0.1
USHBP1-203ENST00000431146 TLX1P31314 330 aaPredicted RBP15.67■□□□□ 0.1
USHBP1-203ENST00000431146 CAPZBP47756 277 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms