RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 SMRP1Q8NCR6 262 aa13.16□□□□□ -0.3
HOXC4-202ENST00000430889 OR4E2Q8NGC2 313 aa13.16□□□□□ -0.3
HOXC4-202ENST00000430889 BBS10Q8TAM1 723 aa13.16□□□□□ -0.3
HOXC4-202ENST00000430889 KLHL6Q8WZ60 621 aa13.16□□□□□ -0.3
HOXC4-202ENST00000430889 GAL3ST3Q96A11 431 aa13.16□□□□□ -0.3
HOXC4-202ENST00000430889 MOAP1Q96BY2 351 aa13.16□□□□□ -0.3
HOXC4-202ENST00000430889 COL21A1Q96P44 957 aa13.16□□□□□ -0.3
HOXC4-202ENST00000430889 BBS4Q96RK4 519 aa13.16□□□□□ -0.3
HOXC4-202ENST00000430889 TMEM168Q9H0V1 697 aa13.16□□□□□ -0.3
HOXC4-202ENST00000430889 ZNF556Q9HAH1 456 aa13.16□□□□□ -0.3
HOXC4-202ENST00000430889 NECTIN3Q9NQS3 549 aa13.16□□□□□ -0.3
HOXC4-202ENST00000430889 SEMA3GQ9NS98 782 aa13.16□□□□□ -0.3
HOXC4-202ENST00000430889 LYARQ9NX58 379 aaKnown RBP13.16□□□□□ -0.3
HOXC4-202ENST00000430889 ENOPH1Q9UHY7 261 aa13.16□□□□□ -0.3
HOXC4-202ENST00000430889 SLC6A14Q9UN76 642 aa13.16□□□□□ -0.3
HOXC4-202ENST00000430889 A4GNTQ9UNA3 340 aa13.16□□□□□ -0.3
HOXC4-202ENST00000430889 UNC80Q8N2C7 3258 aa13.16□□□□□ -0.3
HOXC4-202ENST00000430889 SCN3AQ9NY46 2000 aa13.16□□□□□ -0.3
HOXC4-202ENST00000430889 A0A0J9YVX5 310 aa13.15□□□□□ -0.3
HOXC4-202ENST00000430889 ISM1B1AKI9 464 aa13.15□□□□□ -0.3
HOXC4-202ENST00000430889 FAAHO00519 579 aa13.15□□□□□ -0.3
HOXC4-202ENST00000430889 SLC22A1O15245 554 aa13.15□□□□□ -0.3
HOXC4-202ENST00000430889 NARSO43776 548 aaKnown RBP13.15□□□□□ -0.3
HOXC4-202ENST00000430889 SLITRK5O94991 958 aa13.15□□□□□ -0.3
HOXC4-202ENST00000430889 LCKP06239 509 aa13.15□□□□□ -0.3
HOXC4-202ENST00000430889 ASGR2P07307 311 aa13.15□□□□□ -0.3
HOXC4-202ENST00000430889 FHP07954 510 aa13.15□□□□□ -0.3
HOXC4-202ENST00000430889 GPC1P35052 558 aa13.15□□□□□ -0.3
HOXC4-202ENST00000430889 GSSP48637 474 aa13.15□□□□□ -0.3
HOXC4-202ENST00000430889 TPMTP51580 245 aa13.15□□□□□ -0.3
HOXC4-202ENST00000430889 CRISP1P54107 249 aa13.15□□□□□ -0.3
HOXC4-202ENST00000430889 TFF2Q03403 129 aa13.15□□□□□ -0.3
HOXC4-202ENST00000430889 KIR2DS3Q14952 304 aa13.15□□□□□ -0.3
HOXC4-202ENST00000430889 PTGES3Q15185 160 aaKnown RBP13.15□□□□□ -0.3
HOXC4-202ENST00000430889 ZNF829Q3KNS6 432 aaPredicted RBP13.15□□□□□ -0.3
HOXC4-202ENST00000430889 FRMPD2BQ6IN97 320 aa13.15□□□□□ -0.3
HOXC4-202ENST00000430889 FBXO42Q6P3S6 717 aa13.15□□□□□ -0.3
HOXC4-202ENST00000430889 KLHL35Q6PF15 583 aa13.15□□□□□ -0.3
HOXC4-202ENST00000430889 P3H2Q8IVL5 708 aa13.15□□□□□ -0.3
HOXC4-202ENST00000430889 SLC44A2Q8IWA5 706 aaPredicted RBP13.15□□□□□ -0.3
HOXC4-202ENST00000430889 OR56A1Q8NGH5 318 aa13.15□□□□□ -0.3
HOXC4-202ENST00000430889 FCGR1BQ92637 280 aa13.15□□□□□ -0.3
HOXC4-202ENST00000430889 GTPBP3Q969Y2 492 aaKnown RBP13.15□□□□□ -0.3
HOXC4-202ENST00000430889 TSACCQ96A04 125 aaPredicted RBP13.15□□□□□ -0.3
HOXC4-202ENST00000430889 OR2A14Q96R47 310 aa13.15□□□□□ -0.3
HOXC4-202ENST00000430889 COPS4Q9BT78 406 aa13.15□□□□□ -0.3
HOXC4-202ENST00000430889 BTBD2Q9BX70 525 aa13.15□□□□□ -0.3
HOXC4-202ENST00000430889 C8orf33Q9H7E9 229 aaPredicted RBP13.15□□□□□ -0.3
HOXC4-202ENST00000430889 NTMQ9P121 344 aa13.15□□□□□ -0.3
HOXC4-202ENST00000430889 KLK4Q9Y5K2 254 aa13.15□□□□□ -0.3
HOXC4-202ENST00000430889 SZT2Q5T011 3432 aa13.15□□□□□ -0.3
HOXC4-202ENST00000430889 GOLGA4Q13439 2230 aaKnown RBP13.15□□□□□ -0.3
HOXC4-202ENST00000430889 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.15□□□□□ -0.31
HOXC4-202ENST00000430889 ANKRD33BA6NCL7 494 aa13.15□□□□□ -0.31
HOXC4-202ENST00000430889 M0R082 166 aa13.15□□□□□ -0.31
HOXC4-202ENST00000430889 SERPINB7O75635 380 aa13.15□□□□□ -0.31
HOXC4-202ENST00000430889 TP53P04637 393 aaPredicted RBP13.15□□□□□ -0.31
HOXC4-202ENST00000430889 H1F0P07305 194 aaKnown RBP13.15□□□□□ -0.31
HOXC4-202ENST00000430889 CSNK2A2P19784 350 aaPredicted RBP13.15□□□□□ -0.31
HOXC4-202ENST00000430889 NR4A1P22736 598 aa13.15□□□□□ -0.31
HOXC4-202ENST00000430889 BMXP51813 675 aa13.15□□□□□ -0.31
HOXC4-202ENST00000430889 RAB8AP61006 207 aa13.15□□□□□ -0.31
HOXC4-202ENST00000430889 YPEL5P62699 121 aa13.15□□□□□ -0.31
HOXC4-202ENST00000430889 ALG11Q2TAA5 492 aa13.15□□□□□ -0.31
HOXC4-202ENST00000430889 TJAP1Q5JTD0 557 aa13.15□□□□□ -0.31
HOXC4-202ENST00000430889 P2RY8Q86VZ1 359 aa13.15□□□□□ -0.31
HOXC4-202ENST00000430889 CCDC116Q8IYX3 515 aa13.15□□□□□ -0.31
HOXC4-202ENST00000430889 NLGN4XQ8N0W4 816 aa13.15□□□□□ -0.31
HOXC4-202ENST00000430889 KCT2Q8NC54 265 aa13.15□□□□□ -0.31
HOXC4-202ENST00000430889 UTP15Q8TED0 518 aaKnown RBP13.15□□□□□ -0.31
HOXC4-202ENST00000430889 XAGE5Q8WWM1 108 aa13.15□□□□□ -0.31
HOXC4-202ENST00000430889 GIMAP5Q96F15 307 aa13.15□□□□□ -0.31
HOXC4-202ENST00000430889 NECTIN4Q96NY8 510 aa13.15□□□□□ -0.31
HOXC4-202ENST00000430889 OR2A5Q96R48 311 aa13.15□□□□□ -0.31
HOXC4-202ENST00000430889 KCNK12Q9HB15 430 aa13.15□□□□□ -0.31
HOXC4-202ENST00000430889 MAN2C1Q9NTJ4 1040 aa13.15□□□□□ -0.31
HOXC4-202ENST00000430889 TRNAU1APQ9NX07 287 aaKnown RBP13.15□□□□□ -0.31
HOXC4-202ENST00000430889 CLDND1Q9NY35 253 aa13.15□□□□□ -0.31
HOXC4-202ENST00000430889 KCMF1Q9P0J7 381 aa13.15□□□□□ -0.31
HOXC4-202ENST00000430889 SEC14L3Q9UDX4 400 aa13.15□□□□□ -0.31
HOXC4-202ENST00000430889 PILRAQ9UKJ1 303 aa13.15□□□□□ -0.31
HOXC4-202ENST00000430889 FBXW2Q9UKT8 454 aa13.15□□□□□ -0.31
HOXC4-202ENST00000430889 MGAT4BQ9UQ53 548 aa13.15□□□□□ -0.31
HOXC4-202ENST00000430889 CEP290O15078 2479 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 SPTBN5Q9NRC6 3674 aaKnown RBP13.14□□□□□ -0.31
HOXC4-202ENST00000430889 A0A1W2PRQ8 180 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 SH3PXD2BA1X283 911 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 CLDN24A6NM45 220 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 EMC8O43402 210 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 ASNA1O43681 348 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 ERAL1O75616 437 aaKnown RBP13.14□□□□□ -0.31
HOXC4-202ENST00000430889 LGI1O95970 557 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 HMGN2P05204 90 aaKnown RBP13.14□□□□□ -0.31
HOXC4-202ENST00000430889 NR2F1P10589 423 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 GABRG2P18507 467 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 C21orf33P30042 268 aaPredicted RBP13.14□□□□□ -0.31
HOXC4-202ENST00000430889 PTGER1P34995 402 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 ACTR1BP42025 376 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 SLC15A1P46059 708 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 IDH2P48735 452 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms