RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 OGFOD2Q6N063 350 aa23.37■■□□□ 1.33
CPNE1-212ENST00000430570 IGFL2Q6UWQ7 119 aa23.37■■□□□ 1.33
CPNE1-212ENST00000430570 GALNT12Q8IXK2 581 aa23.37■■□□□ 1.33
CPNE1-212ENST00000430570 THAP3Q8WTV1 239 aaPredicted RBP23.37■■□□□ 1.33
CPNE1-212ENST00000430570 FBXL20Q96IG2 436 aa23.37■■□□□ 1.33
CPNE1-212ENST00000430570 LMF1Q96S06 567 aa23.37■■□□□ 1.33
CPNE1-212ENST00000430570 BRINP2Q9C0B6 783 aa23.37■■□□□ 1.33
CPNE1-212ENST00000430570 LIN28AQ9H9Z2 209 aaKnown RBP23.37■■□□□ 1.33
CPNE1-212ENST00000430570 SLAMF7Q9NQ25 335 aa23.37■■□□□ 1.33
CPNE1-212ENST00000430570 GIMAP4Q9NUV9 329 aa23.37■■□□□ 1.33
CPNE1-212ENST00000430570 PLA2G3Q9NZ20 509 aa23.37■■□□□ 1.33
CPNE1-212ENST00000430570 SH3BP4Q9P0V3 963 aa23.37■■□□□ 1.33
CPNE1-212ENST00000430570 ATP6V1HQ9UI12 483 aa23.37■■□□□ 1.33
CPNE1-212ENST00000430570 ATRXP46100 2492 aa23.37■■□□□ 1.33
CPNE1-212ENST00000430570 TMEM200CA6NKL6 621 aa23.36■■□□□ 1.33
CPNE1-212ENST00000430570 DYRK3O43781 588 aa23.36■■□□□ 1.33
CPNE1-212ENST00000430570 DIAPH2O60879 1101 aa23.36■■□□□ 1.33
CPNE1-212ENST00000430570 ALPPP05187 535 aa23.36■■□□□ 1.33
CPNE1-212ENST00000430570 S1PR1P21453 382 aa23.36■■□□□ 1.33
CPNE1-212ENST00000430570 MAP4K2Q12851 820 aa23.36■■□□□ 1.33
CPNE1-212ENST00000430570 MFAP5Q13361 173 aa23.36■■□□□ 1.33
CPNE1-212ENST00000430570 NXNQ6DKJ4 435 aa23.36■■□□□ 1.33
CPNE1-212ENST00000430570 RPS19BP1Q86WX3 136 aaKnown RBP23.36■■□□□ 1.33
CPNE1-212ENST00000430570 RIMKLAQ8IXN7 391 aa23.36■■□□□ 1.33
CPNE1-212ENST00000430570 SAMD14Q8IZD0 417 aaPredicted RBP23.36■■□□□ 1.33
CPNE1-212ENST00000430570 SIMC1Q8NDZ2 872 aa23.36■■□□□ 1.33
CPNE1-212ENST00000430570 OR7A2PQ8NGA2 310 aa23.36■■□□□ 1.33
CPNE1-212ENST00000430570 OR9A2Q8NGT5 310 aa23.36■■□□□ 1.33
CPNE1-212ENST00000430570 ACTRT2Q8TDY3 377 aa23.36■■□□□ 1.33
CPNE1-212ENST00000430570 CIDECQ96AQ7 238 aaPredicted RBP23.36■■□□□ 1.33
CPNE1-212ENST00000430570 PPCDCQ96CD2 204 aa23.36■■□□□ 1.33
CPNE1-212ENST00000430570 THOC1Q96FV9 657 aaKnown RBP23.36■■□□□ 1.33
CPNE1-212ENST00000430570 ZNF354BQ96LW1 612 aa23.36■■□□□ 1.33
CPNE1-212ENST00000430570 BBS4Q96RK4 519 aa23.36■■□□□ 1.33
CPNE1-212ENST00000430570 STMN3Q9NZ72 180 aa23.36■■□□□ 1.33
CPNE1-212ENST00000430570 PIEZO2Q9H5I5 2752 aa23.36■■□□□ 1.33
CPNE1-212ENST00000430570 SCAMP2O15127 329 aaKnown RBP23.35■■□□□ 1.33
CPNE1-212ENST00000430570 ZFAND5O76080 213 aa23.35■■□□□ 1.33
CPNE1-212ENST00000430570 MDH1P40925 334 aaKnown RBP23.35■■□□□ 1.33
CPNE1-212ENST00000430570 CLDN8P56748 225 aa23.35■■□□□ 1.33
CPNE1-212ENST00000430570 RNF4P78317 190 aa23.35■■□□□ 1.33
CPNE1-212ENST00000430570 FUT7Q11130 342 aa23.35■■□□□ 1.33
CPNE1-212ENST00000430570 ACER2Q5QJU3 275 aa23.35■■□□□ 1.33
CPNE1-212ENST00000430570 HSDL2Q6YN16 418 aa23.35■■□□□ 1.33
CPNE1-212ENST00000430570 C16orf47Q6ZP98 133 aaPredicted RBP23.35■■□□□ 1.33
CPNE1-212ENST00000430570 PTRH1Q86Y79 214 aaKnown RBP23.35■■□□□ 1.33
CPNE1-212ENST00000430570 SLC5A8Q8N695 610 aa23.35■■□□□ 1.33
CPNE1-212ENST00000430570 RBMXL3Q8N7X1 1067 aaKnown RBP23.35■■□□□ 1.33
CPNE1-212ENST00000430570 CTHRC1Q96CG8 243 aa23.35■■□□□ 1.33
CPNE1-212ENST00000430570 ZNF764Q96H86 408 aaPredicted RBP23.35■■□□□ 1.33
CPNE1-212ENST00000430570 ART5Q96L15 291 aa23.35■■□□□ 1.33
CPNE1-212ENST00000430570 EBF4Q9BQW3 602 aa23.35■■□□□ 1.33
CPNE1-212ENST00000430570 GLIPR2Q9H4G4 154 aa23.35■■□□□ 1.33
CPNE1-212ENST00000430570 COPS7AQ9UBW8 275 aa23.35■■□□□ 1.33
CPNE1-212ENST00000430570 ZNF639Q9UID6 485 aa23.35■■□□□ 1.33
CPNE1-212ENST00000430570 CSAG2Q9Y5P2 127 aa23.35■■□□□ 1.33
CPNE1-212ENST00000430570 CPAMD8Q8IZJ3 1885 aa23.35■■□□□ 1.33
CPNE1-212ENST00000430570 TGDSO95455 350 aa23.34■■□□□ 1.33
CPNE1-212ENST00000430570 F10P00742 488 aa23.34■■□□□ 1.33
CPNE1-212ENST00000430570 PRB1P04280 392 aa23.34■■□□□ 1.33
CPNE1-212ENST00000430570 IDH3AP50213 366 aa23.34■■□□□ 1.33
CPNE1-212ENST00000430570 NCBP2P52298 156 aaKnown RBP eCLIP23.34■■□□□ 1.339e-8■□□□□ 9.8
CPNE1-212ENST00000430570 AQP5P55064 265 aa23.34■■□□□ 1.33
CPNE1-212ENST00000430570 SLC37A1P57057 533 aa23.34■■□□□ 1.33
CPNE1-212ENST00000430570 MLF1P58340 268 aa23.34■■□□□ 1.33
CPNE1-212ENST00000430570 MRPS35P82673 323 aaKnown RBP23.34■■□□□ 1.33
CPNE1-212ENST00000430570 MEP1AQ16819 746 aa23.34■■□□□ 1.33
CPNE1-212ENST00000430570 LSM12Q3MHD2 195 aaKnown RBP23.34■■□□□ 1.33
CPNE1-212ENST00000430570 TRMT12Q53H54 448 aaKnown RBP23.34■■□□□ 1.33
CPNE1-212ENST00000430570 ZNF628Q5EBL2 1059 aa23.34■■□□□ 1.33
CPNE1-212ENST00000430570 ABHD17BQ5VST6 288 aa23.34■■□□□ 1.33
CPNE1-212ENST00000430570 TMEM198Q66K66 360 aa23.34■■□□□ 1.33
CPNE1-212ENST00000430570 IGFL3Q6UXB1 125 aa23.34■■□□□ 1.33
CPNE1-212ENST00000430570 R3HCC1LQ7Z5L2 792 aaKnown RBP23.34■■□□□ 1.33
CPNE1-212ENST00000430570 SPATA19Q7Z5L4 167 aa23.34■■□□□ 1.33
CPNE1-212ENST00000430570 C9orf40Q8IXQ3 194 aa23.34■■□□□ 1.33
CPNE1-212ENST00000430570 BEST3Q8N1M1 668 aa23.34■■□□□ 1.33
CPNE1-212ENST00000430570 ZNF615Q8N8J6 731 aa23.34■■□□□ 1.33
CPNE1-212ENST00000430570 KAT2AQ92830 837 aa23.34■■□□□ 1.33
CPNE1-212ENST00000430570 MTERF3Q96E29 417 aa23.34■■□□□ 1.33
CPNE1-212ENST00000430570 ANKRA2Q9H9E1 313 aa23.34■■□□□ 1.33
CPNE1-212ENST00000430570 AIG1Q9NVV5 245 aa23.34■■□□□ 1.33
CPNE1-212ENST00000430570 IGSF10Q6WRI0 2623 aa23.34■■□□□ 1.33
CPNE1-212ENST00000430570 ANKRD28O15084 1053 aa23.33■■□□□ 1.33
CPNE1-212ENST00000430570 WDPCPO95876 746 aa23.33■■□□□ 1.33
CPNE1-212ENST00000430570 LAMP1P11279 417 aa23.33■■□□□ 1.33
CPNE1-212ENST00000430570 PCSK2P16519 638 aa23.33■■□□□ 1.33
CPNE1-212ENST00000430570 PRPS1L1P21108 318 aa23.33■■□□□ 1.33
CPNE1-212ENST00000430570 MPIP34949 423 aa23.33■■□□□ 1.33
CPNE1-212ENST00000430570 HPCAL1P37235 193 aa23.33■■□□□ 1.33
CPNE1-212ENST00000430570 DUSP8Q13202 625 aa23.33■■□□□ 1.33
CPNE1-212ENST00000430570 EXOSC7Q15024 291 aaKnown RBP23.33■■□□□ 1.33
CPNE1-212ENST00000430570 COLEC12Q5KU26 742 aa23.33■■□□□ 1.33
CPNE1-212ENST00000430570 RNF111Q6ZNA4 994 aa23.33■■□□□ 1.33
CPNE1-212ENST00000430570 FAM9CQ8IZT9 166 aa23.33■■□□□ 1.33
CPNE1-212ENST00000430570 ARMC10Q8N2F6 343 aa23.33■■□□□ 1.33
CPNE1-212ENST00000430570 VWA5B2Q8N398 1253 aa23.33■■□□□ 1.33
CPNE1-212ENST00000430570 CEP70Q8NHQ1 597 aa23.33■■□□□ 1.33
CPNE1-212ENST00000430570 ZNF675Q8TD23 568 aa23.33■■□□□ 1.33
CPNE1-212ENST00000430570 AMDHD1Q96NU7 426 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms