RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 NOP53Q9NZM5 478 aaKnown RBP11.57□□□□□ -0.56
USP40-205ENST00000430158 TUBD1Q9UJT1 453 aa11.57□□□□□ -0.56
USP40-205ENST00000430158 PSME2Q9UL46 239 aa11.57□□□□□ -0.56
USP40-205ENST00000430158 GPR45Q9Y5Y3 372 aa11.57□□□□□ -0.56
USP40-205ENST00000430158 EML6Q6ZMW3 1958 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 A6NL46 340 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 SCAMP2O15127 329 aaKnown RBP11.56□□□□□ -0.56
USP40-205ENST00000430158 AKAP10O43572 662 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 MAN1A2O60476 641 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 SCN2BO60939 215 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 ERAL1O75616 437 aaKnown RBP11.56□□□□□ -0.56
USP40-205ENST00000430158 LRATO95237 230 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 IFNA16P05015 189 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 PTGER1P34995 402 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 ZFP36L2P47974 494 aaKnown RBP11.56□□□□□ -0.56
USP40-205ENST00000430158 MRPL19P49406 292 aaKnown RBP11.56□□□□□ -0.56
USP40-205ENST00000430158 AQP5P55064 265 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 PHC1P78364 1004 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 PLIN5Q00G26 463 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 BTBD16Q32M84 506 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 ZNF628Q5EBL2 1059 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 FHL5Q5TD97 284 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 ANKRD26P1Q6NSI1 321 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 FAM111BQ6SJ93 734 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 SPATA19Q7Z5L4 167 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 CAMKMTQ7Z624 323 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 CCDC116Q8IYX3 515 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 ZNF615Q8N8J6 731 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 SIMC1Q8NDZ2 872 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 OR7A2PQ8NGA2 310 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 OR1N1Q8NGS0 311 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 CEP70Q8NHQ1 597 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 RFWD2Q8NHY2 731 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 SLC2A12Q8TD20 617 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 ZNF675Q8TD23 568 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 BRIX1Q8TDN6 353 aaKnown RBP11.56□□□□□ -0.56
USP40-205ENST00000430158 DAZLQ92904 295 aaKnown RBP11.56□□□□□ -0.56
USP40-205ENST00000430158 NCLNQ969V3 563 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 ABHD17AQ96GS6 310 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 RBM18Q96H35 190 aaKnown RBP11.56□□□□□ -0.56
USP40-205ENST00000430158 FBXL20Q96IG2 436 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 TEX37Q96LM6 180 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 BBC3Q96PG8 261 aaPredicted RBP11.56□□□□□ -0.56
USP40-205ENST00000430158 CCDC28BQ9BUN5 200 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 TRIM4Q9C037 500 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 BRINP2Q9C0B6 783 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 ZBTB20Q9HC78 741 aaPredicted RBP11.56□□□□□ -0.56
USP40-205ENST00000430158 FGFR1OP2Q9NVK5 253 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 MAT2BQ9NZL9 334 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 ERVK-11Q9UQG0 969 aa11.56□□□□□ -0.56
USP40-205ENST00000430158 EIF3LQ9Y262 564 aaKnown RBP11.56□□□□□ -0.56
USP40-205ENST00000430158 DIAPH2O60879 1101 aa11.55□□□□□ -0.56
USP40-205ENST00000430158 CBX7O95931 251 aa11.55□□□□□ -0.56
USP40-205ENST00000430158 LAMP1P11279 417 aa11.55□□□□□ -0.56
USP40-205ENST00000430158 ITGA3P26006 1051 aa11.55□□□□□ -0.56
USP40-205ENST00000430158 IL12AP29459 219 aa11.55□□□□□ -0.56
USP40-205ENST00000430158 GYS2P54840 703 aa11.55□□□□□ -0.56
USP40-205ENST00000430158 WNT3P56703 355 aa11.55□□□□□ -0.56
USP40-205ENST00000430158 SLC37A1P57057 533 aa11.55□□□□□ -0.56
USP40-205ENST00000430158 KCNAB2Q13303 367 aa11.55□□□□□ -0.56
USP40-205ENST00000430158 LTB4RQ15722 352 aa11.55□□□□□ -0.56
USP40-205ENST00000430158 B3GNTL1Q67FW5 361 aaPredicted RBP11.55□□□□□ -0.56
USP40-205ENST00000430158 TCTN3Q6NUS6 607 aa11.55□□□□□ -0.56
USP40-205ENST00000430158 IGFL3Q6UXB1 125 aa11.55□□□□□ -0.56
USP40-205ENST00000430158 LRRC25Q8N386 305 aaPredicted RBP11.55□□□□□ -0.56
USP40-205ENST00000430158 CDC26Q8NHZ8 85 aa11.55□□□□□ -0.56
USP40-205ENST00000430158 RIT1Q92963 219 aa11.55□□□□□ -0.56
USP40-205ENST00000430158 CIDECQ96AQ7 238 aaPredicted RBP11.55□□□□□ -0.56
USP40-205ENST00000430158 VMP1Q96GC9 406 aa11.55□□□□□ -0.56
USP40-205ENST00000430158 AMDHD1Q96NU7 426 aa11.55□□□□□ -0.56
USP40-205ENST00000430158 GLIPR2Q9H4G4 154 aa11.55□□□□□ -0.56
USP40-205ENST00000430158 SDR39U1Q9NRG7 319 aaPredicted RBP11.55□□□□□ -0.56
USP40-205ENST00000430158 GPR83Q9NYM4 423 aa11.55□□□□□ -0.56
USP40-205ENST00000430158 CLCA3PQ9Y6N3 262 aa11.55□□□□□ -0.56
USP40-205ENST00000430158 SVILO95425 2214 aa11.55□□□□□ -0.56
USP40-205ENST00000430158 EXPH5Q8NEV8 1989 aa11.54□□□□□ -0.56
USP40-205ENST00000430158 ATXN7O15265 892 aaPredicted RBP11.54□□□□□ -0.56
USP40-205ENST00000430158 OR10H2O60403 315 aa11.54□□□□□ -0.56
USP40-205ENST00000430158 COX7A2P14406 83 aa11.54□□□□□ -0.56
USP40-205ENST00000430158 PCSK2P16519 638 aa11.54□□□□□ -0.56
USP40-205ENST00000430158 TNNI3P19429 210 aa11.54□□□□□ -0.56
USP40-205ENST00000430158 PRPS1L1P21108 318 aa11.54□□□□□ -0.56
USP40-205ENST00000430158 SSTR4P31391 388 aa11.54□□□□□ -0.56
USP40-205ENST00000430158 MLF1P58340 268 aa11.54□□□□□ -0.56
USP40-205ENST00000430158 UFM1P61960 85 aa11.54□□□□□ -0.56
USP40-205ENST00000430158 RAPSNQ13702 412 aa11.54□□□□□ -0.56
USP40-205ENST00000430158 ZNF267Q14586 743 aaPredicted RBP11.54□□□□□ -0.56
USP40-205ENST00000430158 TRMT12Q53H54 448 aaKnown RBP11.54□□□□□ -0.56
USP40-205ENST00000430158 CRB2Q5IJ48 1285 aa11.54□□□□□ -0.56
USP40-205ENST00000430158 GALNT12Q8IXK2 581 aa11.54□□□□□ -0.56
USP40-205ENST00000430158 C9orf40Q8IXQ3 194 aa11.54□□□□□ -0.56
USP40-205ENST00000430158 SAMD14Q8IZD0 417 aaPredicted RBP11.54□□□□□ -0.56
USP40-205ENST00000430158 LGI4Q8N135 537 aa11.54□□□□□ -0.56
USP40-205ENST00000430158 SIRT6Q8N6T7 355 aa11.54□□□□□ -0.56
USP40-205ENST00000430158 ZNF441Q8N8Z8 693 aa11.54□□□□□ -0.56
USP40-205ENST00000430158 LSM14AQ8ND56 463 aaKnown RBP11.54□□□□□ -0.56
USP40-205ENST00000430158 ADCY4Q8NFM4 1077 aa11.54□□□□□ -0.56
USP40-205ENST00000430158 OR9A2Q8NGT5 310 aa11.54□□□□□ -0.56
USP40-205ENST00000430158 OR8K3Q8NH51 312 aa11.54□□□□□ -0.56
USP40-205ENST00000430158 TESCQ96BS2 214 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms