RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 PCDHGB5Q9Y5G0 923 aa13.46□□□□□ -0.25
CALD1-207ENST00000430085 ORC6Q9Y5N6 252 aa13.46□□□□□ -0.25
CALD1-207ENST00000430085 TMEM131Q92545 1883 aa13.46□□□□□ -0.26
CALD1-207ENST00000430085 TMEM229AB2RXF0 380 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 SGK494L7N484 410 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 HS6ST1O60243 411 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 PGM3O95394 542 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 HMGN2P05204 90 aaKnown RBP13.45□□□□□ -0.26
CALD1-207ENST00000430085 NR2F1P10589 423 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 ITGA2P17301 1181 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 GFERP55789 205 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 SHC2P98077 582 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 PPP2R2BQ00005 443 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 EPS8Q12929 822 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 GNA13Q14344 377 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 NDUFA9Q16795 377 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 NKAIN2Q5VXU1 208 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 C11orf74Q86VG3 221 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 OR4N5Q8IXE1 308 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 CA13Q8N1Q1 262 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 METTL25Q8N6Q8 603 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 NUP43Q8NFH3 380 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 OR5T3Q8NGG3 340 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 KAT2AQ92830 837 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 ELF4Q99607 663 aaPredicted RBP13.45□□□□□ -0.26
CALD1-207ENST00000430085 YIPF4Q9BSR8 244 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 RAB33BQ9H082 229 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 PNPLA3Q9NST1 481 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 TMEM74BQ9NUR3 256 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 VNN3Q9NY84 501 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 H0YAE9 185 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 NUDT21O43809 227 aaKnown RBP13.45□□□□□ -0.26
CALD1-207ENST00000430085 DPM1O60762 260 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 GNAO1P09471 354 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 SP9P0CG40 484 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 FPR1P21462 350 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 MYF6P23409 242 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 MYBPC1Q00872 1141 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 LTB4RQ15722 352 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 ZIK1Q3SY52 487 aaPredicted RBP13.45□□□□□ -0.26
CALD1-207ENST00000430085 PMS2CLQ68D20 193 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 ISLR2Q6UXK2 745 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 USP53Q70EK8 1073 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 SLC25A45Q8N413 288 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 TTC29Q8NA56 475 aaPredicted RBP13.45□□□□□ -0.26
CALD1-207ENST00000430085 OR9A4Q8NGU2 314 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 ZNF347Q96SE7 839 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 CD180Q99467 661 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 PDE7BQ9NP56 450 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 EQTNQ9NQ60 294 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 DDX18Q9NVP1 670 aaKnown RBP13.45□□□□□ -0.26
CALD1-207ENST00000430085 EPHA6Q9UF33 1036 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 SUSD2Q9UGT4 822 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 KLHL3Q9UH77 587 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 PLCL2Q9UPR0 1127 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 SH3GLB1Q9Y371 365 aa13.45□□□□□ -0.26
CALD1-207ENST00000430085 PLOD2O00469 737 aa13.44□□□□□ -0.26
CALD1-207ENST00000430085 ADAMDEC1O15204 470 aa13.44□□□□□ -0.26
CALD1-207ENST00000430085 RDH16O75452 317 aa13.44□□□□□ -0.26
CALD1-207ENST00000430085 SERPINB7O75635 380 aa13.44□□□□□ -0.26
CALD1-207ENST00000430085 CTSBP07858 339 aa13.44□□□□□ -0.26
CALD1-207ENST00000430085 CPMP14384 443 aa13.44□□□□□ -0.26
CALD1-207ENST00000430085 GLB1P16278 677 aa13.44□□□□□ -0.26
CALD1-207ENST00000430085 PORP16435 677 aaPredicted RBP13.44□□□□□ -0.26
CALD1-207ENST00000430085 TNFRSF1BP20333 461 aa13.44□□□□□ -0.26
CALD1-207ENST00000430085 PRKACGP22612 351 aa13.44□□□□□ -0.26
CALD1-207ENST00000430085 OR1E2P47887 323 aa13.44□□□□□ -0.26
CALD1-207ENST00000430085 NUBP1P53384 320 aa13.44□□□□□ -0.26
CALD1-207ENST00000430085 CRISP3P54108 245 aa13.44□□□□□ -0.26
CALD1-207ENST00000430085 RAB38P57729 211 aa13.44□□□□□ -0.26
CALD1-207ENST00000430085 OR1D5P58170 312 aa13.44□□□□□ -0.26
CALD1-207ENST00000430085 SRSF5Q13243 272 aaKnown RBP13.44□□□□□ -0.26
CALD1-207ENST00000430085 SYPL1Q16563 259 aa13.44□□□□□ -0.26
CALD1-207ENST00000430085 PRTGQ2VWP7 1150 aa13.44□□□□□ -0.26
CALD1-207ENST00000430085 NIPAL1Q6NVV3 410 aa13.44□□□□□ -0.26
CALD1-207ENST00000430085 KRT73Q86Y46 540 aa13.44□□□□□ -0.26
CALD1-207ENST00000430085 MIPOL1Q8TD10 442 aa13.44□□□□□ -0.26
CALD1-207ENST00000430085 RASSF5Q8WWW0 418 aa13.44□□□□□ -0.26
CALD1-207ENST00000430085 GAB3Q8WWW8 586 aa13.44□□□□□ -0.26
CALD1-207ENST00000430085 TANKQ92844 425 aa13.44□□□□□ -0.26
CALD1-207ENST00000430085 NRBF2Q96F24 287 aa13.44□□□□□ -0.26
CALD1-207ENST00000430085 FBXL20Q96IG2 436 aa13.44□□□□□ -0.26
CALD1-207ENST00000430085 TREX2Q9BQ50 279 aaPredicted RBP13.44□□□□□ -0.26
CALD1-207ENST00000430085 EPB41L1Q9H4G0 881 aa13.44□□□□□ -0.26
CALD1-207ENST00000430085 THSD1Q9NS62 852 aa13.44□□□□□ -0.26
CALD1-207ENST00000430085 NDUFAF4Q9P032 175 aa13.44□□□□□ -0.26
CALD1-207ENST00000430085 C3orf18Q9UK00 162 aa13.44□□□□□ -0.26
CALD1-207ENST00000430085 IGHV5-51A0A0C4DH38 117 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 CYR61O00622 381 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 DUX1O43812 170 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 LDB3O75112 727 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 SMNDC1O75940 238 aaKnown RBP eCLIP13.43□□□□□ -0.26
CALD1-207ENST00000430085 ZBTB11O95625 1053 aaPredicted RBP13.43□□□□□ -0.26
CALD1-207ENST00000430085 RRM2P31350 389 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 RAD23AP54725 363 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 ID2Q02363 134 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 RFX4Q33E94 735 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 CYP27C1Q4G0S4 372 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 IQCCQ4KMZ1 466 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 SLC35F3Q8IY50 421 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms