RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 NXPE4Q6UWF7 544 aa14.71□□□□□ -0.05
PTPRF-206ENST00000429895 PRR18Q8N4B5 295 aa14.71□□□□□ -0.05
PTPRF-206ENST00000429895 OR10T2Q8NGX3 314 aa14.71□□□□□ -0.05
PTPRF-206ENST00000429895 RDH12Q96NR8 316 aa14.71□□□□□ -0.05
PTPRF-206ENST00000429895 ZNF649Q9BS31 505 aa14.71□□□□□ -0.05
PTPRF-206ENST00000429895 TRBV2A0A0J9YWF9 115 aa14.71□□□□□ -0.05
PTPRF-206ENST00000429895 DLGAP1O14490 977 aa14.71□□□□□ -0.05
PTPRF-206ENST00000429895 IFNA5P01569 189 aa14.71□□□□□ -0.05
PTPRF-206ENST00000429895 THEGLP0DJG4 465 aa14.71□□□□□ -0.05
PTPRF-206ENST00000429895 RORAP35398 523 aa14.71□□□□□ -0.05
PTPRF-206ENST00000429895 GCGRP47871 477 aa14.71□□□□□ -0.05
PTPRF-206ENST00000429895 ZNF852Q6ZMS4 543 aa14.71□□□□□ -0.05
PTPRF-206ENST00000429895 ZNF783Q6ZMS7 281 aa14.71□□□□□ -0.05
PTPRF-206ENST00000429895 TRIM73Q86UV7 250 aa14.71□□□□□ -0.05
PTPRF-206ENST00000429895 COMTD1Q86VU5 262 aa14.71□□□□□ -0.05
PTPRF-206ENST00000429895 OR52E2Q8NGJ4 325 aa14.71□□□□□ -0.05
PTPRF-206ENST00000429895 ZNF384Q8TF68 577 aa14.71□□□□□ -0.05
PTPRF-206ENST00000429895 OR51B6Q9H340 312 aa14.71□□□□□ -0.05
PTPRF-206ENST00000429895 POLE4Q9NR33 117 aa14.71□□□□□ -0.05
PTPRF-206ENST00000429895 MYEF2Q9P2K5 600 aaKnown RBP14.71□□□□□ -0.05
PTPRF-206ENST00000429895 A0A096LPI6 279 aa14.71□□□□□ -0.05
PTPRF-206ENST00000429895 SLC16A5O15375 505 aa14.71□□□□□ -0.05
PTPRF-206ENST00000429895 MPPED1O15442 326 aa14.71□□□□□ -0.05
PTPRF-206ENST00000429895 SEMA4FO95754 770 aa14.71□□□□□ -0.05
PTPRF-206ENST00000429895 NFE2L1Q14494 772 aa14.71□□□□□ -0.05
PTPRF-206ENST00000429895 BTBD16Q32M84 506 aa14.71□□□□□ -0.05
PTPRF-206ENST00000429895 MEDAGQ5VYS4 303 aa14.71□□□□□ -0.05
PTPRF-206ENST00000429895 C6orf120Q7Z4R8 191 aa14.71□□□□□ -0.05
PTPRF-206ENST00000429895 PLXDC1Q8IUK5 500 aa14.71□□□□□ -0.05
PTPRF-206ENST00000429895 TOR1AIP2Q8NFQ8 470 aa14.71□□□□□ -0.05
PTPRF-206ENST00000429895 DOHHQ9BU89 302 aa14.71□□□□□ -0.05
PTPRF-206ENST00000429895 RPH3AQ9Y2J0 694 aaPredicted RBP14.71□□□□□ -0.05
PTPRF-206ENST00000429895 RBBP9O75884 186 aa14.71□□□□□ -0.06
PTPRF-206ENST00000429895 STC2O76061 302 aa14.71□□□□□ -0.06
PTPRF-206ENST00000429895 NTSR1P30989 418 aa14.71□□□□□ -0.06
PTPRF-206ENST00000429895 LEPRP48357 1165 aaKnown RBP14.71□□□□□ -0.06
PTPRF-206ENST00000429895 LSSP48449 732 aa14.71□□□□□ -0.06
PTPRF-206ENST00000429895 SOX4Q06945 474 aaPredicted RBP14.71□□□□□ -0.06
PTPRF-206ENST00000429895 RSU1Q15404 277 aa14.71□□□□□ -0.06
PTPRF-206ENST00000429895 SFT2D3Q587I9 215 aa14.71□□□□□ -0.06
PTPRF-206ENST00000429895 KLBQ86Z14 1044 aa14.71□□□□□ -0.06
PTPRF-206ENST00000429895 TMEM185BQ9H7F4 350 aa14.71□□□□□ -0.06
PTPRF-206ENST00000429895 CDKN2DP55273 166 aa14.71□□□□□ -0.06
PTPRF-206ENST00000429895 KIAA0895LQ68EN5 471 aa14.71□□□□□ -0.06
PTPRF-206ENST00000429895 LEG1Q6P5S2 330 aa14.71□□□□□ -0.06
PTPRF-206ENST00000429895 DCDC5Q6ZRR9 648 aa14.71□□□□□ -0.06
PTPRF-206ENST00000429895 PIAS4Q8N2W9 510 aaPredicted RBP14.71□□□□□ -0.06
PTPRF-206ENST00000429895 ZFP41Q8N8Y5 198 aa14.71□□□□□ -0.06
PTPRF-206ENST00000429895 PLEKHO2Q8TD55 490 aa14.71□□□□□ -0.06
PTPRF-206ENST00000429895 ZNF689Q96CS4 500 aaPredicted RBP14.71□□□□□ -0.06
PTPRF-206ENST00000429895 URM1Q9BTM9 101 aaKnown RBP14.71□□□□□ -0.06
PTPRF-206ENST00000429895 A8MVJ9 347 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 ABCB7O75027 752 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 NIPAL4Q0D2K0 466 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 DOC2AQ14183 400 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 PHC2Q8IXK0 858 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 SLCO2A1Q92959 643 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 CCDC163A0A0D9SF12 145 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 ZNF840PA6NDX5 716 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 PPM1BO75688 479 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 NPPAP01160 153 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 GKN3PP0CG01 181 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 RPS3P23396 243 aaKnown RBP eCLIP14.7□□□□□ -0.061e-6■■□□□ 12
PTPRF-206ENST00000429895 HRH2P25021 359 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 CLCA4Q14CN2 919 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 BCL2L15Q5TBC7 163 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 DDIT4LQ96D03 193 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 RNF215Q9Y6U7 377 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 CLCA1A8K7I4 914 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 TGM5O43548 720 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 BCAS2O75934 225 aaPredicted RBP14.7□□□□□ -0.06
PTPRF-206ENST00000429895 ELAVL3Q14576 367 aaKnown RBP14.7□□□□□ -0.06
PTPRF-206ENST00000429895 FCRLBQ6BAA4 426 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 FIGLAQ6QHK4 219 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.7□□□□□ -0.068e-7■■■■□ 23.4
PTPRF-206ENST00000429895 ZFAND4Q86XD8 727 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 THRSPQ92748 146 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 IMP4Q96G21 291 aaKnown RBP14.7□□□□□ -0.06
PTPRF-206ENST00000429895 MAP3K3Q99759 626 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 COPZ2Q9P299 210 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 FTCDNL1E5RQL4 147 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 ANHXE9PGG2 379 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 PET100P0DJ07 73 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 PYCR1P32322 319 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 TIFABQ6ZNK6 161 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 DPY19L4Q7Z388 723 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 FAM3CQ92520 227 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 SIGLEC10Q96LC7 697 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 CPEB1Q9BZB8 566 aaKnown RBP14.7□□□□□ -0.06
PTPRF-206ENST00000429895 CWH43Q9H720 699 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 KCMF1Q9P0J7 381 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 BORCS7-ASMTA0A0B4J1R7 106 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 ISPDA4D126 451 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 FESP07332 822 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 AKR1C4P17516 323 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 DNAJB1P25685 340 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 THBS2P35442 1172 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 PXNP49023 591 aaPredicted RBP14.7□□□□□ -0.06
PTPRF-206ENST00000429895 TMEM151AQ8N4L1 468 aa14.7□□□□□ -0.06
PTPRF-206ENST00000429895 HUS1BQ8NHY5 278 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms