RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 ZNF74Q16587 644 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 ZSWIM7Q19AV6 140 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 SLC36A3Q495N2 470 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 CFAP221Q4G0U5 840 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 MPPE1Q53F39 396 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 SPANXN4Q5MJ08 99 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 RABGAP1LQ5R372 815 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 RTL6Q6ICC9 239 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 FAM53AQ6NSI3 398 aaPredicted RBP2.55□□□□□ -2
HMGB1P9-201ENST00000429856 CDHR3Q6ZTQ4 885 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 CDH26Q8IXH8 852 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 CENPLQ8N0S6 344 aaPredicted RBP2.55□□□□□ -2
HMGB1P9-201ENST00000429856 GPC2Q8N158 579 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 BRSK1Q8TDC3 778 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 CHPT1Q8WUD6 406 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 HPSE2Q8WWQ2 592 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 NCLNQ969V3 563 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 GIMAP5Q96F15 307 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 COG3Q96JB2 828 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 CASD1Q96PB1 797 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 PSKH2Q96QS6 385 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 ACCSQ96QU6 501 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 ZNF607Q96SK3 696 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 SECISBP2Q96T21 854 aaKnown RBP2.55□□□□□ -2
HMGB1P9-201ENST00000429856 LPAR4Q99677 370 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 MTMR12Q9C0I1 747 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 TM9SF3Q9HD45 589 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 STK36Q9NRP7 1315 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 HOMER3Q9NSC5 361 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 EXOC1Q9NV70 894 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 NMRK1Q9NWW6 199 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 VPS54Q9P1Q0 977 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 PRDM4Q9UKN5 801 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 PLCL2Q9UPR0 1127 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 NAALAD2Q9Y3Q0 740 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 NSD2O96028 1365 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 WASHC1A8K0Z3 465 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 A8MU76 341 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 WASH3PC4AMC7 463 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 SH2D1BO14796 132 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 MAPK13O15264 365 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 SEC24AO95486 1093 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 NADKO95544 446 aaPredicted RBP2.54□□□□□ -2
HMGB1P9-201ENST00000429856 UGT2B4P06133 528 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 CD48P09326 243 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 TSPAN8P19075 237 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 ATP6V1C1P21283 382 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 PCMT1P22061 227 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 CTNNA2P26232 953 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 MAT2AP31153 395 aaKnown RBP2.54□□□□□ -2
HMGB1P9-201ENST00000429856 SOX3P41225 446 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 MTIF2P46199 727 aaKnown RBP2.54□□□□□ -2
HMGB1P9-201ENST00000429856 OR3A2P47893 321 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 ATP5OP48047 213 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 TAF6P49848 677 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 CCR4P51679 360 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 HERV-K104P61576 105 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 RPS4XP62701 263 aaKnown RBP2.54□□□□□ -2
HMGB1P9-201ENST00000429856 CSNK2BP67870 215 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 HSPA14Q0VDF9 509 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 COX10Q12887 443 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 KLF5Q13887 457 aaPredicted RBP2.54□□□□□ -2
HMGB1P9-201ENST00000429856 PDK4Q16654 411 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 ZNF699Q32M78 642 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 LRIT3Q3SXY7 679 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 GTDC1Q4AE62 458 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 ATAD3BQ5T9A4 648 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 LCN1P1Q5VSP4 162 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 TCEAL6Q6IPX3 200 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 PYHIN1Q6K0P9 492 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 NEPROQ6NW34 567 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 ZNF790Q6PG37 636 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 SLC25A47Q6Q0C1 308 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 CBLN3Q6UW01 205 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 WASH2PQ6VEQ5 465 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 ZNF841Q6ZN19 808 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 FCRLAQ7L513 359 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 G2E3Q7L622 706 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 ZNF444Q8N0Y2 327 aaPredicted RBP2.54□□□□□ -2
HMGB1P9-201ENST00000429856 ARFGAP2Q8N6H7 521 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 DDHD1Q8NEL9 900 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 STEAP2Q8NFT2 490 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 OR56B2PQ8NGI1 322 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 MRPL24Q96A35 216 aaKnown RBP2.54□□□□□ -2
HMGB1P9-201ENST00000429856 ZNF274Q96GC6 653 aaPredicted RBP2.54□□□□□ -2
HMGB1P9-201ENST00000429856 PRAC1Q96KF2 57 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 FICDQ9BVA6 458 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 MARCH7Q9H992 704 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 SLC25A19Q9HC21 320 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 RAB18Q9NP72 206 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 MAN2C1Q9NTJ4 1040 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 AGPAT5Q9NUQ2 364 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 C19orf25Q9UFG5 118 aaPredicted RBP2.54□□□□□ -2
HMGB1P9-201ENST00000429856 ZNF175Q9Y473 711 aa2.54□□□□□ -2
HMGB1P9-201ENST00000429856 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.54□□□□□ -2
HMGB1P9-201ENST00000429856 PTPRUQ92729 1446 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 FER1L5A0AVI2 2057 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 UMODL1Q5DID0 1318 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 A0A1W2PR80 420 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 GSAPA4D1B5 854 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms