RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 CEP85LQ5SZL2 805 aa5.22□□□□□ -1.57
C9orf3-205ENST00000427193 TBC1D3GQ6DHY5 549 aa5.22□□□□□ -1.57
C9orf3-205ENST00000427193 TBC1D3CQ6IPX1 549 aa5.22□□□□□ -1.57
C9orf3-205ENST00000427193 SLC36A4Q6YBV0 504 aa5.22□□□□□ -1.57
C9orf3-205ENST00000427193 CYHR1Q6ZMK1 362 aa5.22□□□□□ -1.57
C9orf3-205ENST00000427193 FAM83HQ6ZRV2 1179 aaPredicted RBP5.22□□□□□ -1.57
C9orf3-205ENST00000427193 CDHR3Q6ZTQ4 885 aa5.22□□□□□ -1.57
C9orf3-205ENST00000427193 CCDC91Q7Z6B0 441 aa5.22□□□□□ -1.57
C9orf3-205ENST00000427193 SDCCAG8Q86SQ7 713 aaPredicted RBP5.22□□□□□ -1.57
C9orf3-205ENST00000427193 LCA5Q86VQ0 697 aa5.22□□□□□ -1.57
C9orf3-205ENST00000427193 HEATR4Q86WZ0 1026 aa5.22□□□□□ -1.57
C9orf3-205ENST00000427193 TBC1D3Q8IZP1 549 aaPredicted RBP5.22□□□□□ -1.57
C9orf3-205ENST00000427193 CADM3Q8N126 398 aa5.22□□□□□ -1.57
C9orf3-205ENST00000427193 CLDN19Q8N6F1 224 aa5.22□□□□□ -1.57
C9orf3-205ENST00000427193 OR6Y1Q8NGX8 325 aa5.22□□□□□ -1.57
C9orf3-205ENST00000427193 ANKRD49Q8WVL7 239 aa5.22□□□□□ -1.57
C9orf3-205ENST00000427193 MED8Q96G25 268 aa5.22□□□□□ -1.57
C9orf3-205ENST00000427193 ZNF514Q96K75 400 aaPredicted RBP5.22□□□□□ -1.57
C9orf3-205ENST00000427193 ATP6V1G3Q96LB4 118 aa5.22□□□□□ -1.57
C9orf3-205ENST00000427193 COPS8Q99627 209 aa5.22□□□□□ -1.57
C9orf3-205ENST00000427193 APOOQ9BUR5 198 aa5.22□□□□□ -1.57
C9orf3-205ENST00000427193 SPATA16Q9BXB7 569 aa5.22□□□□□ -1.57
C9orf3-205ENST00000427193 GPR174Q9BXC1 333 aa5.22□□□□□ -1.57
C9orf3-205ENST00000427193 FAM96AQ9H5X1 160 aa5.22□□□□□ -1.57
C9orf3-205ENST00000427193 RMI1Q9H9A7 625 aa5.22□□□□□ -1.57
C9orf3-205ENST00000427193 FGF22Q9HCT0 170 aa5.22□□□□□ -1.57
C9orf3-205ENST00000427193 PNRC2Q9NPJ4 139 aaKnown RBP5.22□□□□□ -1.57
C9orf3-205ENST00000427193 MED4Q9NPJ6 270 aa5.22□□□□□ -1.57
C9orf3-205ENST00000427193 FBXO6Q9NRD1 293 aaPredicted RBP5.22□□□□□ -1.57
C9orf3-205ENST00000427193 SENP1Q9P0U3 644 aa5.22□□□□□ -1.57
C9orf3-205ENST00000427193 ATXN10Q9UBB4 475 aa5.22□□□□□ -1.57
C9orf3-205ENST00000427193 EMCNQ9ULC0 261 aa5.22□□□□□ -1.57
C9orf3-205ENST00000427193 GPR34Q9UPC5 381 aa5.22□□□□□ -1.57
C9orf3-205ENST00000427193 DHRS7Q9Y394 339 aa5.22□□□□□ -1.57
C9orf3-205ENST00000427193 FBN3Q75N90 2809 aa5.21□□□□□ -1.57
C9orf3-205ENST00000427193 NAV3Q8IVL0 2385 aa5.21□□□□□ -1.57
C9orf3-205ENST00000427193 CRYBG3Q68DQ2 2970 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 LOC105369274A0A096LPK9 316 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 LOC102723532A0A0G2JNH3 316 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 IQANK1A0A1B0GTG1 560 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 A0A1B0GVT2 93 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 HMGB1P1B2RPK0 211 aaPredicted RBP5.21□□□□□ -1.58
C9orf3-205ENST00000427193 TRIM49D1C9J1S8 452 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 H3BMM5 538 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 GFYI3L273 518 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 SLC31A1O15431 190 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 KLK8O60259 260 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 NIPSNAP2O75323 286 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 NDUFS3O75489 264 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 SLC25A14O95258 325 aaPredicted RBP5.21□□□□□ -1.58
C9orf3-205ENST00000427193 MYZAPP0CAP1 466 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 ATP1B2P14415 290 aaPredicted RBP5.21□□□□□ -1.58
C9orf3-205ENST00000427193 ZNF8P17098 575 aaPredicted RBP5.21□□□□□ -1.58
C9orf3-205ENST00000427193 ACADLP28330 430 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 CRABP2P29373 138 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 ATP5DP30049 168 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 CCR7P32248 378 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 PPARGP37231 505 aaPredicted RBP5.21□□□□□ -1.58
C9orf3-205ENST00000427193 GPR1P46091 355 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 SLCO1A2P46721 670 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 RAB10P61026 200 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 BNC1Q01954 994 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 SGCGQ13326 291 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 FZD2Q14332 565 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 PPP1R3AQ16821 1122 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 KRT71Q3SY84 523 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 PYCR3Q53H96 274 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 ZRANB3Q5FWF4 1079 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 GFI1BQ5VTD9 330 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 FAM45BPQ6NSW5 357 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 CMC1Q7Z7K0 106 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 ISCA2Q86U28 154 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 TMPRSS12Q86WS5 348 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 C17orf82Q86X59 251 aaPredicted RBP5.21□□□□□ -1.58
C9orf3-205ENST00000427193 CTAGE3PQ8IX95 158 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 OR4N4Q8N0Y3 316 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 FAM45AQ8TCE6 357 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 SNRNP27Q8WVK2 155 aaKnown RBP5.21□□□□□ -1.58
C9orf3-205ENST00000427193 OR1E3Q8WZA6 343 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 SGF29Q96ES7 293 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 ADAD1Q96M93 576 aaKnown RBP5.21□□□□□ -1.58
C9orf3-205ENST00000427193 NDNQ99608 321 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 TRIM4Q9C037 500 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 NECTIN3Q9NQS3 549 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 SLC23A2Q9UGH3 650 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 CRLS1Q9UJA2 301 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 IKZF3Q9UKT9 509 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 CA5BQ9Y2D0 317 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 CRYL1Q9Y2S2 319 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 OR1A2Q9Y585 309 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 PCDHGB1Q9Y5G3 927 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 MTORP42345 2549 aa5.21□□□□□ -1.58
C9orf3-205ENST00000427193 PIKFYVEQ9Y2I7 2098 aa5.2□□□□□ -1.58
C9orf3-205ENST00000427193 F8P00451 2351 aa5.2□□□□□ -1.58
C9orf3-205ENST00000427193 DNHD1Q96M86 4753 aa5.2□□□□□ -1.58
C9orf3-205ENST00000427193 CELSR2Q9HCU4 2923 aa5.2□□□□□ -1.58
C9orf3-205ENST00000427193 A0A096LPK6 155 aa5.2□□□□□ -1.58
C9orf3-205ENST00000427193 MGAT4DA6NG13 374 aa5.2□□□□□ -1.58
C9orf3-205ENST00000427193 IQCF5A8MTL0 148 aa5.2□□□□□ -1.58
C9orf3-205ENST00000427193 FPGTO14772 594 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms