RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 GULP1Q9UBP9 304 aa12.69□□□□□ -0.38
USP42-203ENST00000426246 AP3M1Q9Y2T2 418 aa12.69□□□□□ -0.38
USP42-203ENST00000426246 DOCK9Q9BZ29 2069 aa12.69□□□□□ -0.38
USP42-203ENST00000426246 NPIPA5A0A0B4J1W7 369 aa12.69□□□□□ -0.38
USP42-203ENST00000426246 A0A1W2PQ09 198 aa12.69□□□□□ -0.38
USP42-203ENST00000426246 NPIPA7E9PJI5 369 aa12.69□□□□□ -0.38
USP42-203ENST00000426246 NPIPA8P0DM63 369 aa12.69□□□□□ -0.38
USP42-203ENST00000426246 CBSLP0DN79 551 aa12.69□□□□□ -0.38
USP42-203ENST00000426246 CBSP35520 551 aa12.69□□□□□ -0.38
USP42-203ENST00000426246 TGFBR2P37173 567 aa12.69□□□□□ -0.38
USP42-203ENST00000426246 OLR1P78380 273 aa12.69□□□□□ -0.38
USP42-203ENST00000426246 GAB4Q2WGN9 574 aa12.69□□□□□ -0.38
USP42-203ENST00000426246 TRIQKQ629K1 86 aa12.69□□□□□ -0.38
USP42-203ENST00000426246 SYCE2Q6PIF2 218 aa12.69□□□□□ -0.38
USP42-203ENST00000426246 ZNF730Q6ZMV8 503 aa12.69□□□□□ -0.38
USP42-203ENST00000426246 ZNF517Q6ZMY9 492 aaPredicted RBP12.69□□□□□ -0.38
USP42-203ENST00000426246 L3MBTL4Q8NA19 623 aa12.69□□□□□ -0.38
USP42-203ENST00000426246 PLEKHM1Q9Y4G2 1056 aa12.69□□□□□ -0.38
USP42-203ENST00000426246 A0A1W2PQL4 384 aaPredicted RBP12.68□□□□□ -0.38
USP42-203ENST00000426246 CCDC182A6NF36 153 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 OR6C70A6NIJ9 312 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 PDPK1O15530 556 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 CISD3P0C7P0 127 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 LIM2P55344 173 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 TAP2Q03519 686 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 SLAMF1Q13291 335 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 HEPACAMQ14CZ8 416 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 SPIN4Q56A73 249 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 SNAP47Q5SQN1 464 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 PLEKHS1Q5SXH7 462 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 ZNF362Q5T0B9 420 aaPredicted RBP12.68□□□□□ -0.38
USP42-203ENST00000426246 REEP3Q6NUK4 255 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 TMEM107Q6UX40 140 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 TIGD4Q8IY51 512 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 SIX5Q8N196 739 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 OR51L1Q8NGJ5 315 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 ZFPM2Q8WW38 1151 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 PIGKQ92643 395 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 RAD51AP1Q96B01 352 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 COQ8BQ96D53 544 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 TMEM246Q9BRR3 403 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 ACER3Q9NUN7 267 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 CLCA2Q9UQC9 943 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 CSNK1G3Q9Y6M4 447 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 DOCK8Q8NF50 2099 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 ZC3H12DA2A288 527 aaKnown RBP12.68□□□□□ -0.38
USP42-203ENST00000426246 METTL15A6NJ78 407 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 GCM2O75603 506 aaPredicted RBP12.68□□□□□ -0.38
USP42-203ENST00000426246 ADRA2AP08913 450 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 PPP2R1BP30154 601 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 GPR19Q15760 415 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 ZC3H14Q6PJT7 736 aaKnown RBP12.68□□□□□ -0.38
USP42-203ENST00000426246 SLCO4C1Q6ZQN7 724 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 VN1R5Q7Z5H4 357 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 METTL3Q86U44 580 aaKnown RBP12.68□□□□□ -0.38
USP42-203ENST00000426246 C12orf40Q86WS4 652 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 SYNPOQ8N3V7 929 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 OR9A1PQ8NGU1 263 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 CLIP3Q96DZ5 547 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 PPIL1Q9Y3C6 166 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 OTOL1A6NHN0 477 aaPredicted RBP12.68□□□□□ -0.38
USP42-203ENST00000426246 BAK1Q16611 211 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 FAM83HQ6ZRV2 1179 aaPredicted RBP12.68□□□□□ -0.38
USP42-203ENST00000426246 SLC46A3Q7Z3Q1 461 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.68□□□□□ -0.38
USP42-203ENST00000426246 STARD8Q92502 1023 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 ZG16BQ96DA0 208 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 OTUB2Q96DC9 234 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 LYSMD1Q96S90 227 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 ZSCAN5AQ9BUG6 496 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 RANGRFQ9HD47 186 aaPredicted RBP12.68□□□□□ -0.38
USP42-203ENST00000426246 DMRT3Q9NQL9 472 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 MAN2B2Q9Y2E5 1009 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 PCDHGA4Q9Y5G9 962 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 PCYT1BQ9Y5K3 369 aaPredicted RBP12.68□□□□□ -0.38
USP42-203ENST00000426246 PEX16Q9Y5Y5 336 aa12.68□□□□□ -0.38
USP42-203ENST00000426246 KCNE1BA0A087WTH5 132 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 C6P13671 934 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 FUT1P19526 365 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 GPR68Q15743 365 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 ZSWIM7Q19AV6 140 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 C2orf27AQ580R0 203 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 RAB43Q86YS6 212 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 OR4F15Q8NGB8 312 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 KLHL6Q8WZ60 621 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 REPS1Q96D71 796 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 NUS1Q96E22 293 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 C19orf43Q9BQ61 176 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 RBCK1Q9BYM8 510 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 TMEM245Q9H330 911 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 OR51I1Q9H343 314 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 SMURF1Q9HCE7 757 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 PTGFRNQ9P2B2 879 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 TRBV5-4A0A0C4DH59 114 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 C1orf105O95561 183 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 SLC35G4P0C7Q5 338 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 MAGEA8P43361 318 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 LAPTM4BQ86VI4 370 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 KRT78Q8N1N4 520 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 KIAA1958Q8N8K9 716 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms