RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 TGFB1P01137 390 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 CXCL10P02778 98 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 PRKAR1AP10644 381 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 CHRNB1P11230 501 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 GPC1P35052 558 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 NUDT1P36639 197 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 ETV5P41161 510 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 IL12RB1P42701 662 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 PREPP48147 710 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 ETV1P50549 477 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 SF3A2Q15428 464 aaKnown RBP14.42□□□□□ -0.1
C9orf3-204ENST00000424143 TAB1Q15750 504 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 LEXMQ3ZCV2 418 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 PYDC2Q56P42 97 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 MZT2AQ6P582 158 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 TMEM220Q6QAJ8 160 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 FAM83HQ6ZRV2 1179 aaPredicted RBP14.42□□□□□ -0.1
C9orf3-204ENST00000424143 ZNF765Q7L2R6 523 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 C6orf120Q7Z4R8 191 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 FAM129CQ86XR2 697 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 GJD3Q8N144 294 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 SLC7A13Q8TCU3 470 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 ACOT12Q8WYK0 555 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 SMPDL3AQ92484 453 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 UBL7Q96S82 380 aaPredicted RBP14.42□□□□□ -0.1
C9orf3-204ENST00000424143 ARHGAP9Q9BRR9 750 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 PRRG3Q9BZD7 231 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 ZCCHC2Q9C0B9 1178 aaKnown RBP14.42□□□□□ -0.1
C9orf3-204ENST00000424143 DPEP2Q9H4A9 486 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 PELI2Q9HAT8 420 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 SEMA3GQ9NS98 782 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 ASB6Q9NWX5 421 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 RHCGQ9UBD6 479 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 KLF15Q9UIH9 416 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 POLHQ9Y253 713 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 CCDC88CQ9P219 2028 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 A0A0B4J293 547 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 PDPK1O15530 556 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 PRKYO43930 277 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 IFNGR2P38484 337 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 EVX1P49640 407 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 DMPKQ09013 629 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 TARDBPQ13148 414 aaKnown RBP eCLIP14.41□□□□□ -0.1
C9orf3-204ENST00000424143 DSG2Q14126 1118 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 GINS1Q14691 196 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 CYP27C1Q4G0S4 372 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 TMIGD1Q6UXZ0 262 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 SLC36A4Q6YBV0 504 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 C19orf18Q8NEA5 215 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 OR5AK3PQ8NH89 298 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 BBS10Q8TAM1 723 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 TM4SF18Q96CE8 201 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 RNF31Q96EP0 1072 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 DMRTB1Q96MA1 342 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 CAMK1GQ96NX5 476 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 TTYH2Q9BSA4 534 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 ANKRD19PQ9H560 264 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.41□□□□□ -0.1
C9orf3-204ENST00000424143 SIRT3Q9NTG7 399 aaPredicted RBP14.41□□□□□ -0.1
C9orf3-204ENST00000424143 SPG21Q9NZD8 308 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 SPIN1Q9Y657 262 aaPredicted RBP14.41□□□□□ -0.1
C9orf3-204ENST00000424143 NUP210Q8TEM1 1887 aaPredicted RBP14.41□□□□□ -0.1
C9orf3-204ENST00000424143 LEFTY2O00292 366 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 HMGN4O00479 90 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 TLX2O43763 284 aaPredicted RBP14.41□□□□□ -0.1
C9orf3-204ENST00000424143 SH3BP5O60239 455 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 SLC19A2O60779 497 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 LILRB5O75023 590 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 NME6O75414 186 aaPredicted RBP14.41□□□□□ -0.1
C9orf3-204ENST00000424143 BCHEP06276 602 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 CKMP06732 381 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 HOXD10P28358 340 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 PKLRP30613 574 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 HSD17B2P37059 387 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 ETV3P41162 512 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 ANXA11P50995 505 aaKnown RBP14.41□□□□□ -0.1
C9orf3-204ENST00000424143 EFR3AQ14156 821 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 GNA13Q14344 377 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 FLYWCH1Q4VC44 716 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 Q5BKY6 102 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 ATAT1Q5SQI0 421 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 HACD4Q5VWC8 232 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 C22orf42Q6IC83 251 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 PODNL1Q6PEZ8 512 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 GAREM2Q75VX8 874 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 ZER1Q7Z7L7 766 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 TMC8Q8IU68 726 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 CMTM8Q8IZV2 173 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 SLC39A11Q8N1S5 342 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 MORN4Q8NDC4 146 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 BHMTQ93088 406 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 AP2M1Q96CW1 435 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 ZBED6CLQ96FA7 236 aaPredicted RBP14.41□□□□□ -0.1
C9orf3-204ENST00000424143 TMEM43Q9BTV4 400 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 MED17Q9NVC6 651 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 ING3Q9NXR8 418 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 TVP23BQ9NYZ1 205 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 P2RX2Q9UBL9 471 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 SLC9A8Q9Y2E8 581 aa14.41□□□□□ -0.1
C9orf3-204ENST00000424143 MTCL1Q9Y4B5 1905 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms