RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 LRRC25Q8N386 305 aaPredicted RBP17.15■□□□□ 0.34
HDAC6-205ENST00000423941 ZNF675Q8TD23 568 aa17.15■□□□□ 0.34
HDAC6-205ENST00000423941 CKAP2Q8WWK9 683 aa17.15■□□□□ 0.34
HDAC6-205ENST00000423941 MTERF3Q96E29 417 aa17.15■□□□□ 0.34
HDAC6-205ENST00000423941 REEP4Q9H6H4 257 aa17.15■□□□□ 0.34
HDAC6-205ENST00000423941 MAT2BQ9NZL9 334 aa17.15■□□□□ 0.34
HDAC6-205ENST00000423941 MYOTQ9UBF9 498 aa17.15■□□□□ 0.34
HDAC6-205ENST00000423941 BAIAP2L1Q9UHR4 511 aa17.15■□□□□ 0.34
HDAC6-205ENST00000423941 GABRR3A8MPY1 467 aa17.14■□□□□ 0.33
HDAC6-205ENST00000423941 SDHDO14521 159 aa17.14■□□□□ 0.33
HDAC6-205ENST00000423941 VPS4BO75351 444 aa17.14■□□□□ 0.33
HDAC6-205ENST00000423941 MAPK1P28482 360 aa17.14■□□□□ 0.33
HDAC6-205ENST00000423941 FRKP42685 505 aaPredicted RBP17.14■□□□□ 0.33
HDAC6-205ENST00000423941 TNFSF10P50591 281 aa17.14■□□□□ 0.33
HDAC6-205ENST00000423941 C21orf58P58505 322 aa17.14■□□□□ 0.33
HDAC6-205ENST00000423941 ERVK-8P63133 956 aa17.14■□□□□ 0.33
HDAC6-205ENST00000423941 MAD2L1Q13257 205 aaPredicted RBP17.14■□□□□ 0.33
HDAC6-205ENST00000423941 ZNF267Q14586 743 aaPredicted RBP17.14■□□□□ 0.33
HDAC6-205ENST00000423941 MPEG1Q2M385 716 aa17.14■□□□□ 0.33
HDAC6-205ENST00000423941 IL23RQ5VWK5 629 aa17.14■□□□□ 0.33
HDAC6-205ENST00000423941 OGFOD2Q6N063 350 aa17.14■□□□□ 0.33
HDAC6-205ENST00000423941 FAM180BQ6P0A1 224 aa17.14■□□□□ 0.33
HDAC6-205ENST00000423941 GALNT12Q8IXK2 581 aa17.14■□□□□ 0.33
HDAC6-205ENST00000423941 RIMKLAQ8IXN7 391 aa17.14■□□□□ 0.33
HDAC6-205ENST00000423941 C9orf40Q8IXQ3 194 aa17.14■□□□□ 0.33
HDAC6-205ENST00000423941 BEST3Q8N1M1 668 aa17.14■□□□□ 0.33
HDAC6-205ENST00000423941 FNDC5Q8NAU1 212 aa17.14■□□□□ 0.33
HDAC6-205ENST00000423941 NUBPLQ8TB37 319 aa17.14■□□□□ 0.33
HDAC6-205ENST00000423941 PIWIL2Q8TC59 973 aaKnown RBP17.14■□□□□ 0.33
HDAC6-205ENST00000423941 ERP27Q96DN0 273 aa17.14■□□□□ 0.33
HDAC6-205ENST00000423941 MAELQ96JY0 434 aaKnown RBP17.14■□□□□ 0.33
HDAC6-205ENST00000423941 TSSK3Q96PN8 268 aa17.14■□□□□ 0.33
HDAC6-205ENST00000423941 NUF2Q9BZD4 464 aa17.14■□□□□ 0.33
HDAC6-205ENST00000423941 RYDENQ9NUL5 291 aaKnown RBP17.14■□□□□ 0.33
HDAC6-205ENST00000423941 PLA2G3Q9NZ20 509 aa17.14■□□□□ 0.33
HDAC6-205ENST00000423941 ATP6V1HQ9UI12 483 aa17.14■□□□□ 0.33
HDAC6-205ENST00000423941 ERVK-19Q9WJR5 959 aa17.14■□□□□ 0.33
HDAC6-205ENST00000423941 DYTNA2CJ06 578 aa17.13■□□□□ 0.33
HDAC6-205ENST00000423941 OR5H15A6NDH6 313 aa17.13■□□□□ 0.33
HDAC6-205ENST00000423941 OR6C76A6NM76 312 aa17.13■□□□□ 0.33
HDAC6-205ENST00000423941 EIF4E1BA6NMX2 242 aaKnown RBP17.13■□□□□ 0.33
HDAC6-205ENST00000423941 IFI6P09912 130 aa17.13■□□□□ 0.33
HDAC6-205ENST00000423941 MPIP34949 423 aa17.13■□□□□ 0.33
HDAC6-205ENST00000423941 CD96P40200 585 aa17.13■□□□□ 0.33
HDAC6-205ENST00000423941 CASRP41180 1078 aa17.13■□□□□ 0.33
HDAC6-205ENST00000423941 C19orf57Q0VDD7 668 aa17.13■□□□□ 0.33
HDAC6-205ENST00000423941 TUBA3CQ13748 450 aa17.13■□□□□ 0.33
HDAC6-205ENST00000423941 ZNF385BQ569K4 471 aa17.13■□□□□ 0.33
HDAC6-205ENST00000423941 RPUSD3Q6P087 351 aaKnown RBP17.13■□□□□ 0.33
HDAC6-205ENST00000423941 TUBA3EQ6PEY2 450 aa17.13■□□□□ 0.33
HDAC6-205ENST00000423941 FAM111BQ6SJ93 734 aa17.13■□□□□ 0.33
HDAC6-205ENST00000423941 MAVSQ7Z434 540 aa17.13■□□□□ 0.33
HDAC6-205ENST00000423941 ZNF227Q86WZ6 799 aa17.13■□□□□ 0.33
HDAC6-205ENST00000423941 CCDC116Q8IYX3 515 aa17.13■□□□□ 0.33
HDAC6-205ENST00000423941 LIX1Q8N485 282 aa17.13■□□□□ 0.33
HDAC6-205ENST00000423941 MDS2Q8NDY4 140 aa17.13■□□□□ 0.33
HDAC6-205ENST00000423941 CATSPER1Q8NEC5 780 aa17.13■□□□□ 0.33
HDAC6-205ENST00000423941 OR7G1Q8NGA0 311 aa17.13■□□□□ 0.33
HDAC6-205ENST00000423941 DOK4Q8TEW6 326 aa17.13■□□□□ 0.33
HDAC6-205ENST00000423941 EXOSC8Q96B26 276 aaKnown RBP17.13■□□□□ 0.33
HDAC6-205ENST00000423941 MED4Q9NPJ6 270 aa17.13■□□□□ 0.33
HDAC6-205ENST00000423941 MIEF1Q9NQG6 463 aa17.13■□□□□ 0.33
HDAC6-205ENST00000423941 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.13■□□□□ 0.33
HDAC6-205ENST00000423941 NOP53Q9NZM5 478 aaKnown RBP17.13■□□□□ 0.33
HDAC6-205ENST00000423941 COPS7AQ9UBW8 275 aa17.13■□□□□ 0.33
HDAC6-205ENST00000423941 YARS2Q9Y2Z4 477 aaKnown RBP17.13■□□□□ 0.33
HDAC6-205ENST00000423941 PCDHGB6Q9Y5F9 930 aa17.13■□□□□ 0.33
HDAC6-205ENST00000423941 TRPC5OSA6NMA1 111 aa17.12■□□□□ 0.33
HDAC6-205ENST00000423941 NT5EP21589 574 aa17.12■□□□□ 0.33
HDAC6-205ENST00000423941 SSTR4P31391 388 aa17.12■□□□□ 0.33
HDAC6-205ENST00000423941 TLR1Q15399 786 aa17.12■□□□□ 0.33
HDAC6-205ENST00000423941 ZNF628Q5EBL2 1059 aa17.12■□□□□ 0.33
HDAC6-205ENST00000423941 FHL5Q5TD97 284 aa17.12■□□□□ 0.33
HDAC6-205ENST00000423941 ZNF468Q5VIY5 522 aaPredicted RBP17.12■□□□□ 0.33
HDAC6-205ENST00000423941 VWA5B2Q8N398 1253 aa17.12■□□□□ 0.33
HDAC6-205ENST00000423941 ZNF441Q8N8Z8 693 aa17.12■□□□□ 0.33
HDAC6-205ENST00000423941 OR5L2Q8NGL0 311 aa17.12■□□□□ 0.33
HDAC6-205ENST00000423941 LRRC8CQ8TDW0 803 aa17.12■□□□□ 0.33
HDAC6-205ENST00000423941 COQ8BQ96D53 544 aa17.12■□□□□ 0.33
HDAC6-205ENST00000423941 MAGEB18Q96M61 343 aa17.12■□□□□ 0.33
HDAC6-205ENST00000423941 CNPPD1Q9BV87 410 aa17.12■□□□□ 0.33
HDAC6-205ENST00000423941 SLCO1B3Q9NPD5 702 aa17.12■□□□□ 0.33
HDAC6-205ENST00000423941 SLAMF7Q9NQ25 335 aa17.12■□□□□ 0.33
HDAC6-205ENST00000423941 SPTA1P02549 2419 aa17.12■□□□□ 0.33
HDAC6-205ENST00000423941 PLOD2O00469 737 aa17.11■□□□□ 0.33
HDAC6-205ENST00000423941 ANKRD28O15084 1053 aa17.11■□□□□ 0.33
HDAC6-205ENST00000423941 PLOD3O60568 738 aa17.11■□□□□ 0.33
HDAC6-205ENST00000423941 ZNF354AO60765 605 aaPredicted RBP17.11■□□□□ 0.33
HDAC6-205ENST00000423941 ITGA10O75578 1167 aa17.11■□□□□ 0.33
HDAC6-205ENST00000423941 NEURL1O76050 574 aa17.11■□□□□ 0.33
HDAC6-205ENST00000423941 CBX7O95931 251 aa17.11■□□□□ 0.33
HDAC6-205ENST00000423941 G6PDP11413 515 aa17.11■□□□□ 0.33
HDAC6-205ENST00000423941 PCSK2P16519 638 aa17.11■□□□□ 0.33
HDAC6-205ENST00000423941 LBPP18428 481 aa17.11■□□□□ 0.33
HDAC6-205ENST00000423941 PRPS1L1P21108 318 aa17.11■□□□□ 0.33
HDAC6-205ENST00000423941 HLCSP50747 726 aa17.11■□□□□ 0.33
HDAC6-205ENST00000423941 CLDN8P56748 225 aa17.11■□□□□ 0.33
HDAC6-205ENST00000423941 ARG2P78540 354 aa17.11■□□□□ 0.33
HDAC6-205ENST00000423941 DUSP8Q13202 625 aa17.11■□□□□ 0.33
HDAC6-205ENST00000423941 PTGR1Q14914 329 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms