RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 C2orf92A0A1B0GVN3 265 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 ASPDHA6ND91 283 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 TMEM200CA6NKL6 621 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 TYROBPO43914 113 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 SEC22BO75396 215 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 NEFHP12036 1026 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 ZNF24P17028 368 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 FEN1P39748 380 aaKnown RBP10.14□□□□□ -0.79
USP49-204ENST00000423567 SOX3P41225 446 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 ZNF763Q0D2J5 394 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 LAPTM4AQ15012 233 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 MPEG1Q2M385 716 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 ZNF324BQ6AW86 544 aaPredicted RBP10.14□□□□□ -0.79
USP49-204ENST00000423567 CLEC6AQ6EIG7 209 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 LRIG3Q6UXM1 1119 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 GFRALQ6UXV0 394 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 C16orf47Q6ZP98 133 aaPredicted RBP10.14□□□□□ -0.79
USP49-204ENST00000423567 RTL4Q6ZR62 310 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 TRIM46Q7Z4K8 759 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 NUDCD3Q8IVD9 361 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 C9orf40Q8IXQ3 194 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 DND1Q8IYX4 353 aaKnown RBP10.14□□□□□ -0.79
USP49-204ENST00000423567 CLYBLQ8N0X4 340 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 TAGAPQ8N103 731 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 LRRC25Q8N386 305 aaPredicted RBP10.14□□□□□ -0.79
USP49-204ENST00000423567 SLC15A4Q8N697 577 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 PSD4Q8NDX1 1056 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 OR7G1Q8NGA0 311 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 FAM76AQ8TAV0 307 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 DOK4Q8TEW6 326 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 C16orf78Q8WTQ4 265 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 METTL2AQ96IZ6 378 aaKnown RBP10.14□□□□□ -0.79
USP49-204ENST00000423567 SGCZQ96LD1 299 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 ZIM3Q96PE6 472 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 MECRQ9BV79 373 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 EBPLQ9BY08 206 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 BRINP2Q9C0B6 783 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 SSU72Q9NP77 194 aaKnown RBP10.14□□□□□ -0.79
USP49-204ENST00000423567 SIRT5Q9NXA8 310 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 SEC14L3Q9UDX4 400 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 CES1P1Q9UKY3 287 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 OSGIN2Q9Y236 505 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 CFL2Q9Y281 166 aa10.14□□□□□ -0.79
USP49-204ENST00000423567 WBP11Q9Y2W2 641 aaKnown RBP10.14□□□□□ -0.79
USP49-204ENST00000423567 CPAMD8Q8IZJ3 1885 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 CAPN14A8MX76 684 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 HRKO00198 91 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 TM9SF1O15321 606 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 PEX1O43933 1283 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 OR6B1O95007 311 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 UNC5CO95185 931 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 ATP1B1P05026 303 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 BPGMP07738 259 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 CREB1P16220 341 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 MEOX1P50221 254 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 TDGF1P3P51864 188 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 CASP6P55212 293 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 NRG3P56975 720 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 SLC37A1P57057 533 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 RAE1P78406 368 aaKnown RBP10.13□□□□□ -0.79
USP49-204ENST00000423567 SRSF11Q05519 484 aaKnown RBP10.13□□□□□ -0.79
USP49-204ENST00000423567 FUT7Q11130 342 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 KRTCAP3Q53RY4 240 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 PIGGQ5H8A4 983 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 ARL13AQ5H913 290 aaPredicted RBP10.13□□□□□ -0.79
USP49-204ENST00000423567 KANK2Q63ZY3 851 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 ZCCHC23Q6ZST2 131 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 SULF2Q8IWU5 870 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 DDIASQ8IXT1 998 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 MMP21Q8N119 569 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 VWA5B2Q8N398 1253 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 GOLM1Q8NBJ4 401 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 EXOSC8Q96B26 276 aaKnown RBP10.13□□□□□ -0.79
USP49-204ENST00000423567 PGM2Q96G03 612 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 FRMD6Q96NE9 622 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 WWTR1Q9GZV5 400 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 OR10A5Q9H207 317 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 LRTM1Q9HBL6 345 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 KCNK9Q9NPC2 374 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 MIEF1Q9NQG6 463 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 SACM1LQ9NTJ5 587 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 C1orf109Q9NX04 203 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 EHD3Q9NZN3 535 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 HEY2Q9UBP5 337 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 BCAP29Q9UHQ4 241 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 SLC5A6Q9Y289 635 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 TRAF6Q9Y4K3 522 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 POLR3HQ9Y535 204 aaPredicted RBP10.13□□□□□ -0.79
USP49-204ENST00000423567 ACTL7BQ9Y614 415 aa10.13□□□□□ -0.79
USP49-204ENST00000423567 RP1L1Q8IWN7 2480 aaPredicted RBP10.12□□□□□ -0.79
USP49-204ENST00000423567 A0A1W2PS29 197 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 CLEC18AA5D8T8 446 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 NPIPA5E9PKD4 350 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 TFECO14948 347 aaPredicted RBP10.12□□□□□ -0.79
USP49-204ENST00000423567 BIRC5O15392 142 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 ZWINTO95229 277 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 P04436 131 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 CHRNGP07510 517 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 FGF4P08620 206 aa10.12□□□□□ -0.79
USP49-204ENST00000423567 DDCP20711 480 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms