RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 TRIM3O75382 744 aaPredicted RBP3.35□□□□□ -1.87
TOP2A-201ENST00000423485 SEC24DO94855 1032 aaPredicted RBP3.35□□□□□ -1.87
TOP2A-201ENST00000423485 ITIH1P19827 911 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 CR2P20023 1033 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 ACVR2AP27037 513 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 BRS3P32247 399 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 ATP4BP51164 291 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 PRR5P85299 388 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 CCNYL2Q5T2Q4 361 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 TMEM214Q6NUQ4 689 aaKnown RBP3.35□□□□□ -1.87
TOP2A-201ENST00000423485 PIANPQ8IYJ0 282 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 SLC38A6Q8IZM9 456 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 CHST14Q8NCH0 376 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 SMG8Q8ND04 991 aaKnown RBP3.35□□□□□ -1.87
TOP2A-201ENST00000423485 GIMAP1Q8WWP7 306 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 ZNF382Q96SR6 550 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 CDRT15Q96T59 188 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 ZFYVE21Q9BQ24 234 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 MRPL45Q9BRJ2 306 aaKnown RBP3.35□□□□□ -1.87
TOP2A-201ENST00000423485 ATG101Q9BSB4 218 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 PLA2G2FQ9BZM2 168 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 MKRN2Q9H000 416 aaKnown RBP3.35□□□□□ -1.87
TOP2A-201ENST00000423485 IPPKQ9H8X2 491 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 ANKZF1Q9H8Y5 726 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 ELOVL3Q9HB03 270 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 KIAA1456Q9P272 454 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.35□□□□□ -1.87
TOP2A-201ENST00000423485 RALGAPA1Q6GYQ0 2036 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 A0A0B4J203 849 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 MAGEB16A2A368 324 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 SH3D21A4FU49 640 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 PRODHO43272 600 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 AGR2O95994 175 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 TRIM49P0CI25 452 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 TRIM49CP0CI26 452 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 ACP1P24666 158 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 RRM2P31350 389 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 RPS13P62277 151 aaKnown RBP3.35□□□□□ -1.87
TOP2A-201ENST00000423485 CTBSQ01459 385 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 SLC18A2Q05940 514 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 KRR1Q13601 381 aaKnown RBP3.35□□□□□ -1.87
TOP2A-201ENST00000423485 ENPP2Q13822 863 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 CNGA2Q16280 664 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 C2orf68Q2NKX9 166 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 DCAF12L2Q5VW00 463 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 TMEM26Q6ZUK4 368 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 MAP4K3Q8IVH8 894 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 OR4N5Q8IXE1 308 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 ARHGAP24Q8N264 748 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 TRAM1L1Q8N609 369 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 ZNF321PQ8N8H1 164 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 OR8B3Q8NGG8 313 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 C8orf46Q8TAG6 207 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 MRAPQ8TCY5 172 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 C16orf78Q8WTQ4 265 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 RASSF5Q8WWW0 418 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 COG8Q96MW5 612 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 OR8B2Q96RD0 313 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 TIMM29Q9BSF4 260 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 G6PC3Q9BUM1 346 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 GOLPH3Q9H4A6 298 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 METTL17Q9H7H0 456 aaPredicted RBP3.35□□□□□ -1.87
TOP2A-201ENST00000423485 OBP2BQ9NPH6 170 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 GLRX2Q9NS18 164 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 ETNK2Q9NVF9 386 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 CALML5Q9NZT1 146 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 UVRAGQ9P2Y5 699 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 FBXL4Q9UKA2 621 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 BLOC1S6Q9UL45 172 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 USP22Q9UPT9 525 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 KLK5Q9Y337 293 aaPredicted RBP3.35□□□□□ -1.87
TOP2A-201ENST00000423485 USP9XQ93008 2570 aaPredicted RBP3.35□□□□□ -1.87
TOP2A-201ENST00000423485 A0A0G2JMP0 313 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 A0A0X1KG70 313 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 SOCS5O75159 536 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 AP2A2O94973 939 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 MMEP08473 750 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 PRPS2P11908 318 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 EGR1P18146 543 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 UGT1A3P35503 534 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 BCL6P41182 706 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 CAV1Q03135 178 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 PWP1Q13610 501 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 PTGES3Q15185 160 aaKnown RBP3.35□□□□□ -1.87
TOP2A-201ENST00000423485 TSC22D1Q15714 1073 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 HIF1AQ16665 826 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 CLEC12BQ2HXU8 276 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 GPR33Q49SQ1 333 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 LRRC73Q5JTD7 316 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 MPP7Q5T2T1 576 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 IDNKQ5T6J7 187 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 TSTD2Q5T7W7 516 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 CD276Q5ZPR3 534 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 C3P1Q6ZMU1 363 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 C19orf47Q8N9M1 422 aaKnown RBP3.35□□□□□ -1.87
TOP2A-201ENST00000423485 OR4M2Q8NGB6 313 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 OR9Q1Q8NGQ5 310 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 DQX1Q8TE96 717 aaKnown RBP3.35□□□□□ -1.87
TOP2A-201ENST00000423485 POP5Q969H6 163 aaKnown RBP3.35□□□□□ -1.87
TOP2A-201ENST00000423485 SGCZQ96LD1 299 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms